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8 protocols using saturated aqueous picric acid

1

Quantitative Analysis of Collagen Birefringence

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Picrosirius red staining was performed and analyzed as previously described [23 (link)]. Briefly, tissues were deparaffinized, hydrated and stained with 0.1% Sirius red F3BA in saturated aqueous picric acid (Sigma-Aldrich, St. Louis, MO, USA) for 1 h. Nuclei were counterstained with Weigert’s hematoxylin (Sigma-Aldrich, St. Louis, MO, USA), dehydrated, and mounted. Birefringence was captured under circular polarized light and the density of 4 different colors (green, yellow, orange, red, indicative of elevating collagen bundle thickness) was quantified. The ratio of individual colors was expressed relative to the number of total positive pixels. Total collagen was calculated as the proportion of positive pixels relative to the tissue area calculated in ImageJ with thresholding of a bright field image captured at the same position as with the polarized light.
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2

Cardiac Fibrosis and Hypertrophy Analysis

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The anesthetized animals were sacrificed by exsanguination, heart and lung were washed with PBS at 4°C, harvested and processed for analysis. The RV was separated from the left ventricle (LV) and septum (S), and all parts were weighed separately. The degree of RV hypertrophy was calculated as the RV/LV+S ratio.
The degree of cardiac fibrosis was determined by Sirius red staining. Briefly, 10 µm-thick paraffin-embedded tissue sections were deparaffinized, rehydrated and stained in iron hematoxylin for 10 min, followed by rinsing in water for 10 min. The slides were then stained in 0.1% (w/v) Sirius Red F3B (Sigma-Aldrich, Buchs SG, Switzerland) in saturated aqueous picric acid (Sigma-Aldrich, Buchs SG, Switzerland) for 1 h. Sections were washed twice in 0.5% v/v acetic acid, dehydrated rapidly 3 times in 100% alcohol, cleared in xylene and mounted using Merckoglas medium (Merck, Germany). Each section was photographed under a light microscope (Nikon Instruments Inc., Melville, NY, USA) at 10x magnification. At least 10 fields were randomly selected for each rat, each of which contains at least 6 vessels. Images were analyzed using Image software. The percentage collagen was calculated as fibrosis area/total area of the tissue section.
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3

Histological Analysis of FFPE Tissue

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5-µm thick formalin-fixed, paraffin-embedded (FFPE) sections were briefly de-paraffinized at room temperature in four washes of xylene (3 min each). Sections were hydrated in graded ethanols (100%, 100%, 95%, 95%, 70%; all 1 min) to distilled water. Nuclei were stained using immersion in Weigert's iron hematoxylin (Sigma-Aldrich, St. Louis, MO) for 8 mins, followed by washing in running tap water for 10 mins. Sections were stained at room temperature in a solution of 0.1% Sirius red F3BA in saturated aqueous picric acid (Sigma-Aldrich) for one hour, as described in other studies [13] , [14] (link). Subsequently, sections were rinsed in two washes of a 0.5% acetic acid in distilled water solution (5 min each). Ascending concentrations of ethanol were used for dehydration (70%, 95%, 95%, 100%, 100%; 4 quick dips each) and sections were cleared in three washes of xylene (4 quick dips). Sections were covered with resinous mounting medium and glass cover slips.
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4

Picrosirius Red Staining for Bone Growth

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The type of new bone growth was determined with picrosirius red staining and polarized light microscopy (Rich & Whittaker 2005; Shapiro 2008). Paraffin sections were deparaffinized with xylene and rehydrated through a graded series of ethanols. Slides were stained with picrosirius red (0.5 g sirius red F3B in 500 mL saturated aqueous picric acid, Sigma‐Aldrich) for 1 h and washed briefly in acidified water (5 mL glacial acetic acid in 1 L of water). Slides were dehydrated and mounted with Permount mounting medium (Fisher Scientific). Polarized light microscopy was carried out on an Olympus BX60 upright microscope equipped with filters to provide circularly polarized illumination according to published methods (Rich & Whittaker 2005).
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5

Tissue Staining Protocols for Histological Analysis

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For Picrosirius Red/Fast Green staining, sections were postfixed for 30 min in 10% formalin (Sigma), followed by overnight fixation in Bouin’s solution (Sigma), and then extensively washed with tap water. Sections were incubated for 1 h in Picrosirius Red and Fast Green solution: 0.1% direct red 80 (Sigma) and 0.1% fast green FCF (Sigma) in saturated aqueous picric acid (1.2% picric acid in water; Sigma). Sections were quickly washed ten times in distilled water, twice in 70% ethanol, twice in 90% ethanol, then in 100% ethanol (2 × 15 min), and finally in Safesolv solution (Q Path®, VWR International; 2 × 15 min), before being mounted in safemount medium (Q Path®, VWR International). For Hematoxylin and Eosin staining, sections were incubated for 5 min in Hematoxylin solution, washed ten times for 1 min in running tap water, and incubated for 3 min in Eosin solution. Sections were washed three times in distilled water, twice in 70% ethanol, twice in 90% ethanol, then in 100% ethanol (2 × 15 min), and finally in Safesolv solution (Q Path®, VWR International; 2 × 15 min), before being mounted in safemount medium (Q Path®, VWR International). For AFOG staining, an AFOG kit (100 T, Clinisciences) was used, according to the manufacturer’s instructions, before being mounted in safemount medium (Q Path®, VWR International).
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6

Picrosirius Red Staining of GRMD Samples

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Frozen OCT‐embedded GRMD samples were sectioned at 10 µm, and PicoSirius red staining was performed as previously described.12 Briefly, sections were fixed in 4% paraformaldehyde for 10 minutes, rinsed, air dried, stained for 1 hour in 0.1% (wt/vol) Sirius red (Sigma‐Aldrich), dissolved in saturated aqueous picric acid (Sigma‐Aldrich), washed in 2 changes of 0.5% acetic acid, dehydrated in 3 changes of 100% ethanol, cleared with Citra Solv, and mounted with Cytoseal. The resulting slides were viewed under circularly polarized light scope (DMLP; Leica), rotating polarizer, rotating analyzer, and dual quarter wave plates on a camera system (Micropublisher 5.0; Q Imaging).
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7

Quantifying Ventricular Collagen Content

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The middle layer of the left ventricular sections (5 µm) was hydrated with Sirius Red (0.5% in saturated aqueous picric acid (Sigma, Kawasaki-shi, Japan) and viewed under polarized light. Ten fields in each region of the heart were randomly selected with three sections in non-consecutive series, and collagen content was quantified as Sirius Red positive areas by use of a Zeiss Axiovert S100 TV Microscope (Zeiss, Jena, Germany) 2.0 (UTHSCSA, San Antonio, TX, USA).
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8

Picrosirius Red Staining of Collagen

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Sirius red is a polyazo dye which is specifically used for staining collagen. The stain dyes collagen bright red, leaving muscle fibers, cytoplasm, and red blood cells a lighter yellow/red color. Picrosirius red differs from sirius red staining with the addition of picric acid which prevents the indiscriminate staining of noncollagenous structures by sirius red.
Sections were fixed in neutral buffered formalin for 30 minutes. Slides were rinsed in dH2O and stained with Weigert's hematoxylin for 8 minutes. Sections were washed in 3 changes of water followed by staining with picrosirius solution for one hour. Picrosirius solution was made up of 0.5 g sirius red F3B (CI35780, Sigma-Aldrich, USA) in 500 ml saturated aqueous picric acid (197378, Sigma-Aldrich, USA). Sections were washed in 0.5% acetic acid (A6283, Sigma-Aldrich, USA) in dH2O twice for 5 minutes each. Sections were then dehydrated in changes of ethanol (70%, 95%, and 100%) and then cleared in xylene (296325, Sigma-Aldrich, USA), and cover slips were mounted with mounting media (DPX, 06522, Sigma-Aldrich, USA).
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