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9 protocols using pyruvate

1

Real-Time Bioluminescent Monitoring

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HepG2 cells expressing ELuc and SLR3 were seeded in 96-well white clear-bottom plates (Nunc) at a density of 3 x 104 cells/well. After an overnight incubation, the medium was replaced with DMEM without phenol red (Gibco-BRL) supplemented with 10% FBS, 4 mM glutamine, non-essential amino acids (Gibco-BRL), 1 mM pyruvate (FUJIFILM Wako Pure Chemical Corporation), 25 mM HEPES/NaOH (pH 7.0, Nacalai Tesque, Kyoto, Japan) and 300 μM d-luciferin potassium salt (Resem B.V., Lijnden, The Netherlands) with or without BU. Bioluminescence was recorded in real time for 5 s at approximately 30-min intervals in the absence or presence of the R62 long-pass filter (HOYA, Tokyo, Japan) at 37°C in 5% CO2 atmosphere under saturated humidity using a microplate-type luminometer (WSL-1565 Kronos HT, ATTO, Tokyo, Japan). ELuc and SLR3 luminescence intensities were calculated as described previously (30 (link)).
BV2 cells bearing the reporter genes were harvested in PBS and homogenized by ultrasonic wave (UH-50 SMT-company, Tokyo, Japan) following the incubation of BU for 6 h. Luminescence obtained by addition of the luminescence substrate PGL100 reagent (TOYO INK, Tokyo) were measured in FlexStation3 (Molecular Device, CA).
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2

Generation of 4CYPs-POR Artificial Chromosome

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A MAC6 vector was used to generate the 4CYPs-POR MAC. The structure of MAC6 contained a centromere from mouse chromosome 11, EGFP flanked by HS4 insulators, PGKneo, loxP-5’HPRT site, PGKpuro, and telomeres (S2 Fig) [27 (link)]. Hypoxanthine phosphoribosyl transferase (HPRT)-deficient Chinese hamster ovary (CHO; JCRB0218) hybrids containing only the MAC6 or the 4CYPs-POR MAC were maintained in Ham’s F-12 nutrient mixture (Invitrogen, Carlsbad, CA, USA) supplemented with 10% fetal bovine serum and 600 μg/mL G418. HepG2 cells (HB-8065, ATCC, USA) were maintained in Dulbecco’s modified Eagle’s medium (Sigma-Aldrich) supplemented with 10% fetal bovine serum, non-essential amino acids (Wako), pyruvate (Wako), and penicillin-streptomycin (Wako).
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3

Cytochrome P450 Reporter Assay in HepG2 Cells

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ELuc-HepG2 or CYPs-ELuc-HepG2 cells were seeded in 96-well black clear bottom plates (Nunc, Wiesbaden, Germany) at a density of 1 × 104 cells per well. After an overnight incubation, the medium was replaced with DMEM without phenol red (Gibco-BRL) but with 10% FBS (HyClone Laboratories), 4 mM glutamine, non-essential amino acids (Gibco-BRL), 1 mM pyruvate (FUJIFILM Wako Pure Chemical Corporation), 25 mM HEPES/NaOH (pH 7.0, Sigma–Aldrich), and 300 μM D-luciferin potassium salt (Resem B.V., Lijnden, The Netherlands) with or without compound. After incubation for 3 days in a CO2 incubator, ELuc luminescence intensity in the cells was measured. The 96-well plate was set in a microplate-type luminometer (AB-2350 Phelios; ATTO, Tokyo, Japan) and luminescence was measured without disrupting the cells for 5 s. For the WST-1 assay, Premix WST-1 reagent (Takara Bio Inc., Shiga, Japan) was added to the remaining HepG2 cells and incubation was carried out for 1 to 2 h at 37 °C. Absorbance was measured at 450 nm (reference 620 nm) using the microplate reader Infinite 200 PRO (Tecan).
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4

Measurement of PHB, Oxaloacetate, Glucose, and Pyruvate

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To measure PHB content, samples were collected every 12 h, unless otherwise stated. PHB content was analyzed by gas chromatography (Kawata et al. 2012a (link); Monteil-Rivera et al. 2007 (link)) using a commercial PHB sample (Fluka, Buchs, Switzerland) as a standard. oxaloacetate, glucose, and pyruvate content were analyzed by high-performance liquid chromatography (HPLC), as described by the manufacturer (Aminex HPX-87H; Bio-Rad, Tokyo, Japan), with commercially available, pure samples of oxaloacetate, d-glucose, and pyruvate (Wako, Osaka, Japan) used as standards.
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5

Maintenance of CHO and HepG2 Cell Lines

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Hypoxanthine phosphoribosyl transferase-deficient CHO) (JCRB0218, Japanese Collection of Research Bioresources, Osaka, Japan) derived cells were maintained in Ham’s F-12 nutrient mixture (FUJIFILM Wako Pure Chemical Corporation) supplemented with 10% fetal bovine serum (FBS; HyClone Laboratories, Logan, UT, USA). CHO cells harboring the CAG-ELuc MAC vector were generated by a specific insertion of the pCAG-ELuc plasmid [19 (link)] into the R4 attP site of the MAC vector, as reported previously [21 (link)]. HepG2-derived cells (RCB1886, RIKEN BRC, Ibaraki, Japan) were maintained in Dulbecco’s modified Eagle’s medium (DMEM; FUJIFILM Wako Pure Chemical Corporation) supplemented with 10% FBS (HyClone Laboratories), 4 mM L-glutamine, non-essential amino acids (Gibco-BRL, Grand Island, NY, USA), 1 mM pyruvate, 100 units/mL penicillin G, and 100 μg/mL streptomycin (FUJIFILM Wako Pure Chemical Corporation).
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6

Real-time Bioluminescence Monitoring of HepG2 Cells

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ELuc-HepG2 or CYPs-ELuc-HepG2 cells were seeded in 96-well black clear-bottom plates (Nunc) at a density of 1 × 104 cells/well. After an overnight incubation, the medium was replaced with DMEM without phenol red (Gibco-BRL) supplemented with 10% FBS (HyClone Laboratories), 4 mM glutamine, non-essential amino acids (Gibco-BRL), 1 mM pyruvate (FUJIFILM Wako Pure Chemical Corporation), 25 mM HEPES/NaOH (pH 7.0, Sigma–Aldrich), and 300 μM D-luciferin potassium salt (Resem B.V.) with or without compound. Real-time bioluminescence measurement was carried out using a microplate-type luminometer (WSL-1565 Kronos HT, ATTO) for 5 s at 15-min intervals for 3 days. During bioluminescence measurement, the cells were maintained at 37 °C and 5% CO2 and under saturated humidity condition.
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7

Recombinant LDH Enzyme Assay

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Recombinant human LDHA and LDHB were purchased from R&D Systems (Minneapolis, MN, USA). NAD+ was purchased from MP Biomedicals (Santa Ana, CA, USA). DTT, NaCl, and Triton X-100 were obtained from Sigma-Aldrich (St. Louis, MO, USA). Dihexylammonium acetate (DHAA) was obtained from Tokyo Kasei Kogyo (Tokyo, Japan). NADH, pyruvate, bovine serum albumin (BSA), and other reagents were purchased from Fujifilm Wako (Osaka, Japan).
AXKO-0046 was synthesised by Takeda Pharmaceutical Co., Ltd. (Osaka, Japan); AXKO-0058, AXKO-0060, AXKO-0067, and AXKO-0077 were synthesised by Axcelead Drug Discovery Partners, Inc. (Kanagawa, Japan).
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8

Pyruvate Tolerance Test in Fasted Mice

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Glucose or fructose solutions were administered into the mice after 14 h of fasting. Two h after the administration of glucose or fructose, pyruvate (Wako Pure Chemical Industries, Osaka, Japan) (2 g/kg body weight) was injected intraperitoneally. Blood samples were collected from the tail vein of the mice, before and after 30, 60, 90, and 120 min of the pyruvate injection. The blood glucose levels were measured using Breeze2 (BAYER, Leverkusen, Germany). The control mice received a saline solution instead of the glucose or fructose solutions, before the pyruvate tolerance test.
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9

Enzymatic Assay for Metabolic Intermediates

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Lactic acid and oxaloacetic acid were purchased from Tokyo Chemical Industry (Tokyo, Japan). Pyruvate, phosphoenolpyruvic acid, citric acid, pyridoxal monophosphate (PLP), forskolin, and glucose were purchased from FUJIFILM Wako Pure Chemical Corporation (Osaka, Japan). Acetyl-CoA, L-glutamine, and L-serine were purchased from Nacalai Tesque (Kyoto, Japan). D-serine, L-glutamate monosodium salt monohydrate, and sodium L-lactate were purchased from Sigma-Aldrich (St. Louis, MO, USA).
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