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5 protocols using cd19 clone hib19

1

Sorting Naive and Memory B Cells

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PBMCs were stained with antibodies specific for CD19 (clone HIB19, eBiosciences, San Diego, CA), IgM (clone MHM-88), IgD (clone IA6-2), and CD27 (clone O323, all from BioLegend, San Diego, CA). B cell populations were sorted using an Aria II (BD Biosciences) into naive (CD19+CD27- and IgM+ and/or IgD+) or memory (CD19+CD27+) cells. Purity of sorted populations was tested and confirmed to have <2% contamination by the other B cell subset. Cells were lysed using TRIzol Reagent (Life Technologies, Grand Island, NY) and stored at -80°C until RNA extraction.
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2

Tonsil CD4+ T cell isolation

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Tonsils were mechanically disrupted by first cutting the tissue samples with a scalpel into small pieces, and then dissociating into single cells using gentleMACS technology (C tube and gentleMACS; Miltenyi Biotec). Alternatively, cells were dissociated by forcing through a 40-µm cell strainer. Single-cell suspension was then enriched for light density cells by a Ficoll gradient centrifugation (Lymphoprep). Tonsil CD4+ T cells were enriched using CD4+ T cell isolation kit (Miltenyi Biotec) and used for intracellular flow cytometry or further purified by cell sorting. Naive CD4+ T cells, GC Tfh cells, and extra-follicular Tfh cells were sorted using antibodies against CD4 (clone RPA-T4; BioLegend), CD19 (clone HIB19; eBioscience), CD45RO (clone UCHL1; BD Biosciences), CXCR5 (clone RF8B2 from BD Biosciences or clone J252D4 from BioLegend), and PD-1 (clone EH12.1 or clone EH12.2H7 from BD Biosciences) on a FACS Aria instrument (BD Biosciences).
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3

Xenograft Cell Characterization Protocol

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Cells harvested from xenografts were analysed for the expression of human CD44 (clone DB105; Miltenyi Biotec), human CD24 (clone 32D12; Miltenyi Biotec), human EpCAM (clone CD326; Miltenyi Biotech), human B lymphocyte antigen, CD19 (clone HIB19; eBioscience), human neural cell adhesion molecule, CD56 (clone AF12-7H3; Miltenyi Biotec) and human CD45 (clones H130 and 2D1; eBioscience) following mouse cell depletion (Miltenyi Biotech).
All cells were analysed on a Cyan ADP flow cytometer (Dako Cytomation) and data processed using Summit v4.3 software (Beckman Coulter). Based on flow cytometric analysis we estimated >98% of cells were donor-derived.
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4

Multiparametric Flow Cytometry Analysis of Stimulated B Cells

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B cells were Fc blocked (BD Biosciences, San Jose, CA) prior to staining. Cells were analyzed using an LSR Fortessa cytometer (BD Biosciences), with gating performed by first setting a wide lymphocyte gate by forward and side scatter, followed by two sets of doublet exclusion, first by FSC-A by FSC-H and then by FSC-A by FSC-W, and by excluding dead cells with a viability stain (Life Technologies, Grand Island, NY). B cell purity was determined during isolation and at baseline by staining for CD19 (clone HIB19, eBiosciences, San Diego, CA). Cell phenotype was determined by staining IgM (clone MHM-88), CD27 (clone O323), and CD38 (clone HIT2, all from BioLegend, San Diego, CA), with results reported for the live cells gate. B cell proliferation was determined by dilution of CFSE dye, with results reported for the live singlet lymphocyte gate.
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5

Flow Cytometry Analysis of PBMCs and CSF

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Flow cytometry analysis was performed using antihuman antibodies to BDCA-2 (clone 201A; BioLegend, San Diego, CA), CD33 (clone P67.6; BioLegend), CD14 (clone 61D3; eBioscience, San Diego, CA), Lyve-1 (clone 537028; R&D Systems, Minneapolis, MN), CD3 (clone SK7; BioLegend), CD19 (clone HIB19; eBioscience), CD16 (clone B73.1; BioLegend), CD1c (clone L161; BioLegend), Lox-1 (clone 15C4; BioLegend), and human leukocyte antigen DR (HLA-DR) (clone Immu-357; Beckman Coulter, Brea, CA). One million PBMCs and between 2 × 104 and 40 × 104 CSF cells were incubated with human-Fc block (BD Biosciences, San Jose, CA) for 10 minutes at RT and then with antibodies for 20 minutes at 4°C. Subsequently, the samples were washed with PBS + 2% FBS (flow buffer) for 5′, spun at 500g, and resuspended in 200 μL of flow buffer. The samples were run on a Gallios flow cytometer (Beckman Coulter Life Sciences) on the same day of the collection. The cells were analyzed using FlowJo software (Tree Star, Ashland, OR).
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