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15 protocols using caspase 1 p20

1

NLRP3 Inflammasome Activation Assay

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Antibodies and reagents used in this work were purchased from the indicated sources: NLRP3 (AdipoGen; AG-20B-0014); ASC (Novus; NB1–78978 for western blots and Adipogen; AG-25B-0006 for IHC), caspase-1 p20 (Santa Cruz; sc-398715), Iba-1 (Novus NB1001028 or Wako; 19–19741), CD11b (Novus; NB11089474), goat anti-mouse-HRP (Santa Cruz Biotechnology; sc-2005) and goat anti-rabbit-HRP (Santa Cruz Biotechnology; sc-2004); IL-1 beta (Abcam; ab9722); actin (Sigma-Aldrich; A1978). Cryopyrin/NLRP3 siRNA (sc-45470) was from Santa Cruz Biotechnology. MCC950/CP-456773 (Sigma; pz0280) was from Sigma-Aldrich. Cocaine hydrochloride (C5776) and LPS (L2880) was from Sigma-Aldrich. Sterile water was used to dissolve cocaine and LPS. ATP (tlrl-atpl) was from Invivogen. FAM-FLICA caspase assay kit (#97) was from ImmunoChemistry
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2

Oesophageal Tissue Protein Extraction and Western Blotting

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Oesophageal strips or cultured cells were collected to extract the protein with RIPA lysis buffer (Beyotime Biotech), which contained 1 mmol/L final concentration of phenylmethanesulfonyl fluoride (PMSF). After complete lysis, the samples were centrifuged at 10 000 g for 5 minutes at 4°C to precipitate the tissue debris. The supernatants were used to measure the protein concentration by a BCA Protein Assay Kit (Beyotime Biotech). The proteins were electrophoresed in 10% SDS‐PAGE gels and then transferred to PVDF membranes. After blocking with 5% skim milk for 1 hour at room temperature, the membranes were incubated with the following primary antibodies: CaSR (1:200, ab19347, Abcam), NLRP3 (1:100, ab214185, Abcam), ASC (1:100, sc‐22514‐R, Santa Cruz), Caspase‐1 p20 (1:100, sc‐398715, Santa Cruz) and IL‐1β (1:100, sc‐32294, Santa Cruz) at 4°C overnight. The membrane was washed with TBST and incubated with secondary antibodies for 2 hours at room temperature. Protein bands were visualized on the membrane with a Gel Imaging System, and the protein bands were quantified with ImageJ software.
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3

Western Blot Analysis of Mouse Liver Tissue

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Part of the right lobe of the mouse liver tissue was weighed and cut into pieces. The mouse liver tissue sample or AML12 cells were lysed on ice in RIPA buffer (Roche Diagnostics, Basel, Switzerland) containing a mixture of phosphatase inhibitor and serine protease inhibitor for 30 min. After that, the lysate was centrifuged at 12,000 g for 15 min at 4 °C. The sediment was discarded, and the supernatant was taken. The BCA protein assay kit (Thermo Fisher Scientific, Waltham, MA, USA) was used to determine the protein concentration in the supernatant. The protein was denatured and separated by a 10% SDS-PAGE gel, and then transferred to a PVDF membrane (Miripoli, Massachusetts, USA). At room temperature, the membrane was sealed with 5% (w/v) skimmed milk for 2 h. Next, the membrane was incubated with the primary antibody overnight at 4 °C: ERK, p-ERK, HO-1, GPX4, NLRP3, Gasdermin-D (Cell Signaling Technology, MA, USA), Caspase 1 (p20) (Santa Cruz, CA, USA), which would combine HRP. The membrane was incubated with the secondary antibody for 2 h, the membrane was washed five times with TBST, and the protein was visualized using an enhanced chemiluminescence method (Yeasen, Shanghai, China). Imager (Tanon, Shanghai, China) was used to image and quantify the blot.
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4

Macrophage Apoptosis Assay Protocol

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AMs or J774A.1 cells were seeded in 24-well plates, treated with the indicated reagents, and harvested after 12 hours or 24 hours. The plates were incubated with PI staining (Immunochemistry, 98) in the dark for 5 minutes and observed using a fluorescence microscope. For immunofluorescence analysis, cells were fixed with paraformaldehyde, permeabilized with 0.2% Triton X-100, blocked with animal-free blocking solution, and incubated with caspase-1 p20 (Santa Cruz, sc-398715) at 4 °C overnight. Afterward, the cells were washed with PBS, incubated with Alexa Fluor-conjugated secondary antibodies, and mounted using a mounting medium containing DAPI.
For flow cytometric analyses, cells were harvested as described before, blocked with TruStain fcX, incubated with CD11c (Biolegend, 117307), and CD170 (Biolegend, 155507) for 20 minutes. Thereafter, the cells were washed with cell staining buffer (Biolegend, 420201), centrifuged at 300g for 5 minutes, resuspended in cell staining buffer, and analyzed using flow cytometry. Caspase-1 activity was analyzed by treating the cells with FAM-FLICA Caspase Assays (Immunochemistry, 98) according to the instructions of the manufacturer, followed by analysis using flow cytometry.
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5

Investigating NLRP3 inflammasome activation and TGF-β signaling in liver fibrosis

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Reagents were purchased as follows: DDC (Sigma-Aldrich, 137030), DMSO (Sigma-Aldrich, 543900), LPS (Sigma-Aldrich, L2630), ATP (YEASEN, 60605ES03), calcipotriol (MCE, HY-10001), calcifediol (MCE, HY-32351), MCC950 (MCE, HY-12815); The antibodies used for western blot were purchased as follows: NLRP3 (Cell Signaling Technology, 15101), caspase-1 p20 (Santa Cruz Biotechnology, sc-398715), ASC (Santa Cruz Biotechnology, sc-514414), IL-1β (Cell Signaling Technology, 12426), α-SMA (ABclonal, A17910), Col1A1 (ABclonal, A1352), β-actin (ABclonal, AC026), YAP1 (proteintech, 13584-1-AP), p-YAP1 (Cell Signaling Technology, 13008), VDR (ABclonal, A2194), CYP7A1 (ABclonal, A10615), MRP3 (Cell Signaling Technology, 39909), CYP8B1 (Abcam, ab191910). The antibodies used for IHC were purchased as follows: NLRP3 (ABclonal, A12694), α-SMA (ABclonal, A17910), Col1A1 (ABclonal, A1352).
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6

Western Blot Analysis of Inflammatory Markers

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The brain samples and the primary microglia in transwell upper chambers and neurons in the plates were collected for Western blotting. In brief, the extracted proteins were separated by Tris-glycine SDSPAGE and then transferred to PVDF membranes for 30 min. Primary antibodies used were Nrf2 (1 : 1000, cat# ab31163, Abcam), HO-1 (1 : 1000, cat# ab13243, Abcam), NLRP3 (1 : 200, cat# SC-66846, Santa Cruz Biotechnology), adaptor apoptosis-related speck-like protein (ASC) (1 : 200, cat# SC-22514, Santa Cruz Biotechnology), caspase-1 (1 : 200, cat# SC-56036, Santa Cruz Biotechnology), caspase-1 p20 (1 : 200, cat# SC-398715, Santa Cruz Biotechnology), Histone H3 (1 : 3000, cat# BS7416, Bioworld Technology), and β-actin (1 : 3000, cat# AP0060, Bioworld Technology, Minneapolis, MN, USA). Then, the membranes were incubated for 2 h at room temperature with corresponding second antibody. Detection was conducted by using chemiluminescence solution.
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7

Immunofluorescence Staining of Brain Sections

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Immunofluorescence staining was performed as previously described (34 (link), 35 (link)). Briefly, brain sections (6 μm) were fixed with 4% paraformaldehyde. The sections were incubated overnight at 4°C with primary antibodies against Iba-1 (1:50, cat# SC-98468, Santa Cruz Biotechnology), NLRP3 (1:50, cat# SC-66846, Santa Cruz Biotechnology), caspase-1 p20 (1:50, cat# SC-398715, Santa Cruz Biotechnology) and NeuN (1:200, cat# MAB377, EMD Millipore, USA) followed by incubation with proper second antibodies. TUNEL staining was performed according to the manufacturer’s instructions (Roche Inc., Indianapolis, USA). Primary neurons were incubated with primary antibody against NeuN (1:200, cat# MAB377, EMD Millipore, USA) and caspase-1 p20 (1:50, cat# SC-398715, Santa Cruz Biotechnology) overnight at 4°C followed by incubation with proper second antibodies. The sections were visualized under a ZEISS HB050 inverted microscope system.
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8

Immunohistochemical Analysis of Brain Inflammation

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Immunohistochemical staining was conducted as previously described (34 (link)). In brief, brain sections were fixed with 4% paraformaldehyde and embedded in paraffin. After being deparaffinized, the brain sections were incubated overnight at 4°C with primary antibodies against SIRT1 (1:50, Santa Cruz Biotechnology), NLRP3 (1:50, Santa Cruz Biotechnology), ASC (1:50, Santa Cruz Biotechnology), and caspase-1 p20 (1:50, Santa Cruz Biotechnology). After sections were washed with PBS, they were incubated with HRP-conjugated IgG for 60 min at room temperature. Slides were visualized by incubation with diaminobenzidine and hydrogen peroxide. Staining intensity was scored on a 0-to-4 scale system. In this system, 0 indicates no detectable positive cells and 4 indicates the highest density of positive cells.
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9

Western Blot Analysis of Cellular Proteins

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Heart tissue or NRCMs were lysed in RIPA buffer containing 20 mM Tris-HCl (pH 7.4), 4% sodium dodecyl sulfate (SDS), and 10% glycerol. The protein lysis sample was boiled for 10 min at 100°C. The bicinchoninic acid protein assay kit was used for quantifying protein concentration. A total of 30 μg protein was electrophoresed in 10% or 12% SDS-polyacrylamide gel electrophoresis and transferred onto polyvinylidene difluoride membranes (Millipore) and then blocked with 5% bovine serum albumin for 1 h. The blots were then incubated with primary antibody overnight. The following day, blots were incubated with secondary antibody labeled with horseradish peroxidase for 1 h after washing three times with Tris-buffered saline with Tween 20. An electrochemiluminescence kit was used for scanning protein blots, which were analyzed by ImageLab 5.2.1 (Bio-Rad Laboratories, Hercules, CA). The following antibodies were used in this study: GAPDH (Cell Signaling Technology, 2118), p16 (Proteintech, 10883-1-AP), p19 (Proteintech, 10272-2-AP), p53 (Cell Signaling Technology, 2524), AC-p53 (Cell Signaling Technology, 2570), Sirt1 (Abcam, Cambridge, UK, ab110304), NLRP3 (Abcam, ab214185), and caspase 1 p20 (Santa Cruz Biotechnology, Santa Cruz, CA, sc-398715).
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10

Immunohistochemical Analysis of NLRP3 Inflammasome

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Paraffin-embedded colorectal tissues of mice were dewaxed and exposed to 3% hydrogen peroxide for 30 min at room temperature to inhibit endogenous peroxidase activity. Tissues were steamed for 30 min in citrate buffer to repair antigens and incubated with 5% bovine serum albumin (BSA) solution to block non-specific antigens. Primary antibodies such as NLRP3 (1:100; Novus, CO, USA), IL-1β (1:100; Cell Signaling Technology, MA, USA), Caspase-1 p45 (1:100; Proteintech Group, Chicago, IL, USA), and Caspase-1 p20 (1:50; Santa Cruz Biotechnology, CA, USA) were added for overnight incubation at 4 °C, followed by the secondary antibody (Wuhan Boster Biological Technology, Wuhan, China) at 37 °C for 30 min. Then, StreptAvidin Biotin Complex (SABC) was added and incubated at 37 °C for 30 min. Finally, diaminobenzidine substrate (DAB) was applied to sections and counterstained with hematoxylin for microscopic examination after resin sealing.
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