The largest database of trusted experimental protocols

4 protocols using hif 1α nb100 479

1

Mouse Interferon-gamma Signaling Assay

Check if the same lab product or an alternative is used in the 5 most similar protocols
Recombinant mouse IFN-γ (485 MI/CF) was obtained from R&D systems. 1400W, and Dimethyloxalylglycine (DMOG) were obtained from Cayman Chemical. Pam3CysK4 (PAM) was obtained from EMC Microcollections. Ascorbate, citrulline, and S-Nitroso-N-acetylpenicillamine (SNAP) were obtained from Sigma-Aldrich. The following primary antibodies were used: HIF-1α (NB100-479, Novus Biologicals), IL-1b (AF-401-NA, R&D systems), and the following Cell Signaling Technology antibodies: HIF-1α (D2U3T), RelA (D14E12), RelB (C1E4), NF-kB1 (D4P4D), IkBa (L35A5), α/β-Tubulin (2148), Histone H3 (D1H2), and β-actin (13E5).
+ Open protocol
+ Expand
2

Western Blot Analysis of HIF-1α and HIF-2α

Check if the same lab product or an alternative is used in the 5 most similar protocols
Whole cell lysates were prepared in radioimmunoprecipitation assay (RIPA) buffer supplemented with a complete protease inhibitor cocktail (Roche Life Science, Penzberg, Germany). Equal amounts of sample (80-100 μg protein) were diluted in Laemmli buffer (Bio-Rad Laboratories, Hercules, CA, USA) with dithiothreitol (DTT) and were boiled for 5 min. Lysates were separated on 7.5% Mini-PROTEAN® TGX™ Precast Protein Gels (Bio-Rad Laboratories) and proteins were transferred to polyvinylidene fluoride (PVDF) membranes using a Transblot Turbo System (Bio-Rad Laboratories). Membranes were blocked in 5% non-fat dry milk/Tris buffered saline with Tween 20 (TBS-T), and incubated overnight with the following primary antibodies: HIF-1α (NB100-479, 1:500 dilution, Novus Biologicals, Centennial, CO, USA), HIF-1α (610958, 1:500 dilution, BD Bioscience, San Jose, CA; USA), HIF-2α (ab199, 1:500 dilution, Abcam), Succinate Dehydrogenase Complex Flavoprotein Subunit A (SDHA) (ab14715, 1:4000 dilution, Abcam). After washing, membranes were incubated for 1 h with secondary antibodies (1:5000 dilution, Jackson ImmunoResearch, West Grove, PA, USA). Images were acquired using a LAS-3000 Imager (Fujifilm, Tokyo, Japan). Band intensity was quantified using Fiji [38 (link)].
+ Open protocol
+ Expand
3

Antibody Characterization for Western Blot Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
Antibodies used for western blot analysis are as follows: HIF-1α (GTX127309) from GeneTex; HIF-1α (NB100-479) and HIF-2α (NB100-122) from Novus Biologicals; HIF-2α (#7096), pVHL (#2738), FASN (#3180) and ubiquitin (#3936) from Cell Signaling; Elongin C (sc-135895), CUL2 (sc-166506), ARNT (sc-5580), SREBP1 (sc-366), and normal mouse and rabbit IgG (sc-2025 and sc-2027 respectively) from Santa Cruz Biotechnology; CAD (ab40800), RNA polymerase II large subunit CTD (ab5408), and CA9 (ab107257) from Abcam; β-actin (A5441) and anti-Flag M2 (F1804) from Sigma-Aldrich; p65 (610869) from Becton Dickinson (BD) and REDD1 (A500-001A) from Bethyl Laboratories. For immunofluorescence, antibodies against pVHL (BD, 556347) or FASN (#3180) were used. For immunoprecipitation, antibodies against pVHL (BD, 556347), FASN (Santa Cruz Biotechnology, sc-55580) or CAD (Abcam, ab40800) were used.
+ Open protocol
+ Expand
4

Quantifying Hypoxia-Induced HIF-1α and Targets

Check if the same lab product or an alternative is used in the 5 most similar protocols
To measure HIF-1α, cells were exposed to oxygen conditions for 6 h, as HIF-1α protein levels peak after approximately 6 h of hypoxia exposure and then gradually decline [39 (link),40 (link)]. For downstream HIF-1 target genes, cell lysates were generated following 18 h of normoxia, chronic hypoxia and intermittent hypoxia (near the peak of HIF-1 target gene expression [39 (link)]). Lysates were prepared using RIPA buffer containing protease inhibitors (Roche complete, Sigma-Aldrich, Castle Hill, NSW Australia) and resolved using SDS-PAGE and western blotting as before [41 (link)]. Antibodies were as follows: HIF-1α (NB100-479, Novus), Glut1 (ab115730, Abcam, Cambridge, MA, USA), hexokinase 2 (TA325030, Origene), Histone H3 (ab1791, Abcam), PHD2 (4835, Cell Signaling Technologies, Danvers, MA, USA) and LDHA (3582T, Cell Signaling Technologies).
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!