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8 protocols using power masher

1

Liver Triglyceride Extraction and Quantification

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Approximately 20 mg of tissue was sampled from the thawed middle lobe of the liver. Excess water was absorbed with filter paper. Next, samples were weighed precisely. Each sample was mechanically homogenized in an extraction buffer consisting of chloroform/methanol (1:2) solution (volume of the extraction solution is ten times the tissue weight) with a masher (power masher, Nippi, Tokyo, Japan). The chloroform/methanol solution (the chloroform/methanol solution is 30 times the tissue weight) was added. After the vortex, 6N hydrochloric acid was added (volume of the 6N hydrochloric acid solution is 0.2 times the tissue weight). Next, the chloroform solution was added (chloroform solution is eight times the tissue weight), then centrifuged at 2000 rpm for 5 min to collect the lower layer of liquid. Finally, the chloroform/methanol/0.1 N hydrochloric acid (3:48:47) (chloroform/methanol/0.1 N hydrochloric acid solution is 10 times the tissue weight) was added then centrifuged at 2000 rpm for 5 min. The lower layer of liquid was collected to determine the liver fat weight. The triglyceride (TG) content in total lipid extract was determined using the LabAssayTM triglyceride assay kit (Wako Chemicals, Osaka, Japan), following the manufacturer’s instructions.
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2

Quantitative Gene Expression Analysis in Synchronized Worms

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Synchronized worms were cultured on OP or Q plates (50 μM and 500 μM) for 96 h, before mRNA for genes of interest (Table 1) [25 (link)–30 (link)] was extracted via crushing using the Power Masher® and Bio Masher® (Nippi Inc., Tokyo, Japan), and reverse-transcribed to cDNA using the PrimeScript RT Reagent Kit and the gDNA Eraser (Takara, Shiga, Japan). A real-time quantitative PCR (qPCR) was conducted using the Thermal Cycler Dice® Real Time System Lite (Takara) with Thunderbird® SYBR® qPCR Mix (TOYOBO, Osaka, Japan), and appropriate primers (Table 2). Actin was selected as a reference gene and confirmed the suitability by comparing with tba-1 and pmp-3, used as alternative reference genes [31 (link)]. Each qPCR reaction was performed in triplicate. Assays were conducted at least three times independently.
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3

Enzymatic Assay of β-Galactosidase in Drosophila Larvae

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An enzymatic assay of β-galactosidase activity using tissue lysate was performed as described [14] , [15] . Wandering third instar larvae were collected and washed with PBS, and each whole larva was collected into a BioMasher II tube (Nippi Inc., Japan). An additional 100 μl appropriate buffer was added and homogenized by 20 strokes with PowerMasher (Nippi Inc., Japan). Additional 100 μl buffer was added and vortexed for 30 s. Then, 2 μl larval lysate was added to 200 μl assay solution (1 mM chlorophenol red-β-d-galactopyranoside; CPRG; Wako pure chemicals, Japan in appropriate buffers) and incubated at 25°C for 30 min. An absorbance of 574 nm was measured. 4 to 10 larvae were assayed for each experimental condition. The background value was obtained from the control assays with no larval lysate. Larvae with no UAS construct were also assayed to examine the activity of endogenous β-galactosidase.
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4

Fetal Brain RNA Isolation and qRT-PCR

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The fetal brains collected on G16.5 were grinded using a Power Masher (Nippi, Tokyo, Japan) and total RNA was isolated using the RNeasy Mini Kit (Qiagen Inc., Tokyo, Japan) following the manufacturer’s directions. Complementary DNAs were prepared with a first strand cDNA synthesis kit (Rever Tra Ace-α; Toyobo Co., Ltd, Osaka, Japan), according to the manufacturer’s directions using a MyCyclerTM thermal cycler (BIORAD, Hercules, CA). Subsequently, qRT-PCR was performed using the Thermal Cycler Dice (Takara Bio Inc., Tokyo, Japan) and SYBR II Premix Ex Taq (Takara Bio Inc.) according to the manufacturer’s directions. Data were normalized based on the expression of the housekeeping gene beta-actin. The primer sequences (NIPPON EGT CO., LTD., Toyama, Japan) were as follows: mouse β-actin forward: 5'-CGTGGGCCGCCCTAGGCACCA-3' and reverse: 5'-ACACGCAGCTCATTGTA-3'; mouse IL-6 forward: 5'-ACAACCACGGCCTTCCCTAC-3' and reverse: 5'-TCCACGATTTCCCAGAGAACA-3'.
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5

RNA Extraction and Quality Assessment

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Specimens were homogenized using a Power Masher (Nippi Inc.) with BioMasher II (Nippi Inc.) in QIAzol Lysis Reagent (Qiagen). Total RNA was extracted using the miRNeasy Mini Kit (Qiagen). Quantity and purity (A260/280 ratio, A260/A230 ratio) of the extracted RNA were measured using a NanoDrop1000 spectrometer (NanoDrop Technologies). Quality check of extracted RNA was performed by measuring RNA Integrity Number and the 28S/18S rRNA ratio using an Agilent 2100 BioAnalyzer (Agilent Technologies).
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6

Renal microRNA Profiling in Diabetes

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The kidney samples from each group (control, diabetes, diabetes on imidapril, and diabetes on imidapril with AcSDKP) that had been maintained at −70°C were first incubated in RNAlaterR-ICE (Life Technologies) for 16 h at −20°C before homogenization to allow us to extract high-quality miR. Subsequently, tissues were homogenized on ice using a Power Masher (Nippi, Tokyo, Japan). The miRs were extracted using a miRNeasy Mini kit (Qiagen) according to the manufacturer's instructions. Complementary DNA (cDNA) was generated by a miScript II RT kit (Qiagen) using the hiSpec buffer method. miR expression was quantified using a miScript SYBR Green PCR Kit (Qiagen), with 3 ng of complementary DNA. The primers for quantifying Mm_miR-29a, Mm_miR-29b, and Mm_miR-29c were miScript primer assays predesigned by Qiagen. The mature miR sequences were 5′ UAGCACCAUCUGAAAUCGGUUA for Mm_miR-29a, 5′ UAGCACCAUUUGAAAUCAGUGUU for Mm_miR-29b, and 5′ UAGCACCAUUUGAAAUCGGUUA for Mm_miR-29c. All experiments were performed in triplicate, and Hs_RNU6-2_1 (Qiagen) was utilized as an internal control. The primers to quantify Mm_miR-let7b-1, Mm_miR-let7c, and Mm_miR-let7f were designed by Qiagen. The mature sequences were UGGAAGACUUGUGAUUUUGUUGU for Mm_miR-let7b-1, CUGUACAACCUUCUAGCUUUCC for Mm_miR-let7c, and CUAUACAAUCUAUUGCCUUCCC for Mm_miR-let7f, respectively.
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7

Serum and Tissue Protein Analysis in Mice

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Blood collected from the mice was centrifuged (3,000 rpm, 4°C, 20 min) to prepare serum samples. The hypothalamus and liver were homogenized using a Power Masher (Nippi Inc., Tokyo, Japan) with BioMasher (Nippi Inc.) in a lysis buffer containing 20 mM Tris (pH 7.4), 150 mM NaCl, 2 mM EDTA, 1% (v/v) Nonidet P-40, 0.1% (w/v) SDS, and protease inhibitor cocktail diluted 1∶100 (Sigma-Aldrich Inc., St. Luis, MO, USA). After centrifugation (12,000×g, 4°C, 10 min), the total protein in supernatant was measured using a reducing agent- and detergent-compatible (RC DC) protein assay reagent (Bio-Rad Laboratories Inc., Hercules, CA, USA) [11] , and total protein concentrations of supernatant then diluted with lysis buffer to achieve 3 mg/mL concentrations. The level of adiponectin, SAA, IL-6, and CGRP proteins in all the samples were determined using the Mouse/Rat Adiponectin ELISA kit (Otsuka Pharm Co., Tokyo, Japan), PHASE™ RANGE Mouse SAA ELISA kit (Tri-Delta Diagnostics Inc., Morris Plains, NJ, USA), Mouse IL-6 ELISA Ready-SET-Go! kit (eBioscience Inc., San Diego, CA, USA), and CGRP ELISA kit (USCN Life Science Inc., Huston, TX, USA), respectively, according to the manufacturer's instructions.
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8

Cerebral Cortex Protein Extraction

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Dissected cerebral cortices (Fig. 2) from 6-week-old male offspring (n = 5/group) were homogenized using the Biomasher II and Powermasher (Nippi Inc., Tokyo, Japan) in T-PER Tissue Protein Extraction Reagent (20 mL/g of tissue) (Takara Bio. Inc., Shiga, Japan) containing protease inhibitor cocktail (Complete tablet, EDTA-free, Roche Diagnostics, Basel, Switzerland) at 4 °C. Homogenates were centrifuged at 10,000 × g for 5 min at 4 °C to remove insoluble debris and then supernatants were collected for analysis. Supernatant total protein concentrations were determined by the bicinchoninic acid method using the Pierce BCA Protein Assay kit (Thermo Fisher Scientific K.K., MA, USA). Extracts were then stored at −80 °C until use.

Collected/analyzed areas of the cerebral cortex in offspring mice (red zone)

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