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7 protocols using gap43

1

Western Blot Analysis of Neurological Markers

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Equal amounts of total protein from tissue homogenates were separated on SDS-PAGE gels and transferred onto PVDF membranes (Millipore, USA). After blocking with 5% skimmed milk in 0.1% Tween 20 in Tris buffer solution (TBST) for 1 h at room temperature, the membranes were incubated with primary antibodies against Nrf2 (1:1000, R&D Systems), NADPH quinine oxidoreductase-1 (NQO-1, 1:1000, Abcam), glial fibrillary acidic protein (GFAP, 1:1000, Abcam), growth-associated protein 43 (GAP43,1:1000, NOVUS), myelin basic protein (MBP, 1:1000, NOVUS), and β-tubulin (1:1000, CST) overnight at 4°C. And then the membranes were incubated with horseradish peroxidase-conjugated IgG antibody at room temperature for 1 h. Immunoreactive bands were visualized by a ChemiDocTM MP Imaging System (Bio-Rad), and the integrated density for each band was quantified with Image J software (National Institutes of Health, Bethesda, MD).
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2

Corneal Immunofluorescence Staining Protocol

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Corneas were stained with the following antibodies: βIII tubulin (#801201; Biolegend, San Diego, CA, USA), GAP43 (#NB300-143; Novus Biological, Littleton, CO, USA), mLAMP1 (#AF4320; R&D Systems, Minneapolis, MN, USA), and SDC3 (#SC9496; Santa Cruz Biotechnology, Dallas, TX, USA). Appropriate secondary DyLite 488, 594, and 647 antibodies from Jackson Immunobiologicals (West Grove, PA, USA) were used for immunolabeling. Corneas were stained with DAPI (#46190; Thermo Fisher Scientific, Grand Island, NY, USA) before flat mounting to visualize nuclei. To achieve the best flattening, the corneas were placed epithelial side-up with mounting media (#17984-25, Fluoromount G; Electron Microscopy Sciences; Hatfield, PA, USA) and coverslipped.
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3

Antibody Labeling Protocol for Protein Analysis

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Primary antibodies were purchased from Abcam [protein kinase C (PKCβ), DA receptor D1 (DR1)], Merck Millipore (GAP-43), Novus Biologicals [arrestin beta 2 (ARRB2), GAPDH], Sigma–Aldrich [ACTIN-β, fasciculation and elongation protein zeta 1 (FEZ1)], and Synaptic Systems (BASSOON). Secondary Alexa-coupled antibodies were from Life Technologies. Secondary HRP-coupled antibodies were from Dako. Anti-Mouse IgG + IgM/HRP was obtained from Jackson ImmunoResearch (West Grove, United States). Unless otherwise indicated, all other chemicals were obtained from Sigma–Aldrich.
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4

Immunostaining of Primary Neuronal Cultures

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The primary cortical neurons cultured on the coverslips were fixed at defined time points with 4% PFA for 2 h at 4°C. The sections were dewaxed in xylene three times each for 5 min and re-hydrated through a series of alcohol with descending concentrations (100 to 95% to 80 to 70% and then tap water twice, each step for 5 min). The prepared tissue sections and cells were blocked in PBS with 10% normal horse serum at room temperature for 1 h and then incubated at 4°C overnight with the following primary antibodies in 10% normal horse serum: microtubule-associated protein 2 (MAP2, 1:200, Boster Biological Engineering Co.), Tuj1 (1:200, Millipore), GFAP (1:500, Boster Biological Engineering Co.), GAP43 (1:200, NOVUS), MBP (1:200, NOVUS), ionized calcium binding adaptor molecule 1 (Iba-1, 1:200, CST), CD163 (1:30, Santa Cruz), and CD68 (1:300, Boster Biological Engineering Co.). The secondary antibodies conjugated with Alexa fluor® fluorochrome (1: 300) were used to detected corresponding primary antibodies. The immunostaining results were checked under a fluorescence microscope (Olympus IX73).
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5

Spinal Cord Tissue Analysis Protocol

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The spinal cord tissues were fixed in 10% formaldehyde, embedded in paraffin and cut into 5‐μm‐thick transverse sections. Hematoxylin and eosin (H&E) staining and Nissl staining were performed according to the manufacturer's instructions. For immunofluorescence, 10‐μm‐thick transverse frozen sections were incubated with primary antibodies targeting MAP‐2 (1:200) and Nrf2 (1:200, R&D systems), and the longitudinal sections, with antibodies against GFAP (1:500, Abcam), NF‐200 (1:200, Boster), Tuj1 (1:200, CST), GAP43 (1:300, Novus), BrdU (1:200), Nestin (1:200, Novus), NeuN (1:300) and NSE (1:100, Abcam). After incubation with species‐specific secondary antibodies conjugated with Alexa Fluor 488 (1:300, CST) or Cyanine3 (1:200, Invitrogen) for 1 hour at room temperature, the sections were counterstained with 4′,6‐diamidino‐2‐phenylindole (DAPI) and observed under a laser‐scanning confocal microscope (Leica).
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6

Fluorescence Immunohistochemistry for APP and Apoptosis

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Fluorescence immunohistochemistry was performed as previously described (Cheng et al, 2011 (link)). The following primary antibodies were used: hAPP, 1:1000 (6E10, Covance); OMP, 1:5000 (Wako); Gap43, 1:1000 (Novus Biologicals); cleaved caspase-3, 1:1000 (Cell Signaling Technology); Camk2a, 1:1000 (Abcam); and cleaved caspase-9, 1:200 (Cell Signaling Technology). Sections were examined using confocal microscopy (LSM510 microscope, Zeiss).
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7

Immunostaining of Neural Markers

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The sections were dewaxed in xylene three times each for 5 min and rehydrated through a series of ethanol of decreasing concentrations (100% to 95% to 80% to 70% ethanol and then tap water once, each step for 5 min). After the sections were heated by microwave to near boiling for 20 min in antigen retrieval buffer (10 mM citric acid, pH 6.0), all sections were cooled down to room temperature, and blocked in PBS with 10% normal horse serum at room temperature for 1 h, and then incubated with the following primary antibody at 4 °C overnight: glial fibrillary acidic protein (GFAP, 1:500; Boster Biological Engineering Co.), Nestin (1:200; Abcam) microtubule-associated protein 2 (MAP2, 1:200; Boster Biological Engineering Co.), growth-associated protein 43 (GAP43, 1:200; NOVUS), myelin basic protein (MBP, 1:200; NOVUS), ionized calcium binding adaptor molecule 1 (Iba-1, 1:200; Cell Signaling Technology), CD163 (1:30; Santa Cruz) and CD68 (1:300; Boster Biological Engineering Co.). The secondary antibodies tagged with different Alexa fluor® fluorochrome diluted in PBS with 10% normal horse serum were used to detect the corresponding primary antibody. The immunostained sections were examined under a fluorescence microscope (Olympus IX73).
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