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4 protocols using tgfbri

1

Analyzing Epithelial-Mesenchymal Transition

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Western blotting was performed as described previously 38 (link). Antibodies against E-cadherin, vimentin, fibronectin, ZEB1, TGFBRI, pSMAD3 and SMAD3 were purchased from Cell Signaling Technology, p65 from Proteintech and p84 from Invitroge. The membranes were stripped and reprobed with an anti-α-tubulin antibody (Sigma-Aldrich, USA) as the loading control.
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2

Kinase Inhibitors for TGF-beta Signaling

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Antibodies to phosphorylated (pSer465/467) or total SMAD2, TGFBRI, TGFBRII, pSer63 c-JUN, pSer473 or total AKT, pThr180/Tyr182 or total p38MAPK, and GAPDH were all from Cell Signaling Technology. Antibody against SMAD3 was from Invitrogen; antibodies to TGFBR1 (H100) and TGFBRII (L21) were from Santa Cruz; antibodies to Myc-tag and firefly luciferase were from Millipore; antibodies to N-terminal of BUB1 were from Abcam (rabbit) or Santa Cruz (goat); antibody to Flag-HRP was from Sigma; and antibodies to His-HRP were from Invitrogen (clones H3 and C-term) or Millipore (H8 clone). HRP-conjugated and fluorophore-conjugated secondary antibodies were from Jackson ImmunoResearch. Recombinant human TGFβ1 was obtained from HumanZyme. TGFBRI inhibitor SB431542 was obtained from Cayman Chemical. D-Luciferin was from Xenogen Corp. The siGENOME Smart Pool siRNA library targeted against all human kinases, non-silencing siRNA (NSS), and individual siRNA from the siGENOME Smart Pool, and custom siRNA against BUB1 were obtained from Dharmacon. A specific, small molecule inhibitor of BUB1 kinase activity (2-[(4-amino-1-(tert-butyl)-1H-pyrazolo[3,4-d]pyrimidin-3-yl)methyl]phenol; (2OH-BNPP1) (9 (link)) was synthesized in house.
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3

Analysis of TGF-β Signaling Pathway

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Nuclear and/or cytoplasmic fractionation was separated using the Cell Fractionation Kit (Cell Signaling Technology, USA) according to the manufacturer’s instructions, and the whole-cell lysates were extracted with radio-immunoprecipitation assay (RIPA) Buffer (Cell Signaling Technology). Western blotting was performed according to a standard method, as described previously.53 (link) Antibodies against SMAD2, SMAD4, TGFBRI, TGFBRII, pSMAD3, and SMAD3 were purchased from Cell Signaling Technology, and p84 from Invitrogen. The membranes were stripped and reprobed with an anti-α-tubulin antibody (Sigma-Aldrich, USA) as the loading control.
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4

Investigating Cellular Signaling Pathways with Targeted Protein Modulation

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Human recombinant TGF-β1, PDGF and BMP4 were purchased from Biolegend (San Diego, CA). Fast-start universal SYBR Green master mix was from Roche, and sb431542, MG132 and chloroquine were from Sigma. The antibodies used for immunoblotting (IB): GAPDH 1:10000 (Sigma), β-actin 1:5000 (Santa Cruz),Smad2 1:1000 (Cell Signalling), Smad3 1:1000 (Cell Signalling), p-Smad2 (Ser465/467) 1:1000 (Cell Signalling), p-Smad3 (Ser423/425) 1:500 (Cell Signalling), IDH1 1:1000 (Origene), SP1 1:1000 (Sigma), α-tubulin 1:1000 (Santa Cruz), p-p38 1:1000 (Cell Signalling), p38 1:1000 (Cell Signalling), p-Erk1/2 1:2000 (Cell Signalling), Erk1/2 1:1000 (Cell Signalling), S100A4/FSP1 1:500 (Abnova), TGFBRI 1:1000 (Cell Signalling), TGFBRII 1:1000 (Abcam), p-TGFBRI 1:200 (Abcam), Cav1 1:1000 (ProteinTech), FKBP12 1:1000 (ProteinTech), and SARA 1:1000 (ProteinTech).
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