The largest database of trusted experimental protocols

5 protocols using pcdna vector

1

Investigating SNHG16 Regulation in Glioma Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
SNHG16-overexpression vector (SNHG16) and its negative control (Vector), specific small interfering RNA (siRNA) against SNHG16 (si-SNHG16) and siRNA scrambled control (si-NC), miR-424-5p mimic and miR-NC, Anti-miR-424-5p, and Anti-NC were purchased from RiboBio (Guangzhou, China). Construction of SNHG16-overexpression vector (SNHG16) was accomplished by amplifying cDNA of SNHG16 and subcloning into the pcDNA vector (RiboBio). The vectors or oligonucleotides were transfected into T98G or LN229 cells by Lipofectamine 2000 (Thermo Fisher Scientific) in compliance with the manufacturer’s protocol. The primers for SNHG16-overexpression were F 5′-aagcttGCGTTCTTTCGAGG-3′ and R 5′-ggatccTGACGGTAGTTTCCC-3′, including HindIII and BamHI restriction sites. The sequence for si-SNHG16 was 5′-UAAAGACAUGGCACUUUGGGU-3′, and the sequence for si-NC was 5′-UUCUCCGAACGUGUCACGUTT-3′.
+ Open protocol
+ Expand
2

Overexpression and Knockdown of circ-ITCH in Ovarian Cancer Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
A2780 and OVCAR3 cell lines were purchased from Procell (Wuhan, China), and the ISOE80 cell line was obtained from the biotechnology company of Huzheng (Shanghai, China). All cells were cultured in Dulbecco’s modified eagle medium (DMEM, Thermo Fisher Scientific, Waltham, MA, USA) containing 10% fetal bovine serum (FBS, Hyclone, South Logan, UT, USA) and 0.1% penicillin/streptomycin (Thermo Fisher Scientific) at 37 ℃ with 5% CO2.
Overexpression vector of circ-ITCH was acquired by cloning the sequence of circ-ITCH into the pcDNA vector (RiboBio, Guangzhou, China). Small interfering RNAs against circ-ITCH (si-circ-ITCH) and CDH1 (si-CDH1) and their respective controls were synthesized by GenePharma (Shanghai, China). MiR-106a mimics, miR-control, miR-106a inhibitor, and anti-miR-control were synthesized by RiboBio. A2780 and OVCAR3 cells were transfected using Lipofectamine 2000 (Invitrogen, Carlsbad, CA, USA).
+ Open protocol
+ Expand
3

Transfection of miR-591 Mimic and Inhibitor

Check if the same lab product or an alternative is used in the 5 most similar protocols
Chemically synthesized miR-591 mimic, miR-591 inhibitor or miR-negative control (NC), pcDNA-vector and pcDNA-TCF4 were obtained from Guangzhou RiboBio Co., Ltd. (Guangzhou, China). Cells were transfected using Lipofectamine 2000 (Invitrogen; Thermo Fisher Scientific, Inc.), according to the manufacturer’s protocol.
+ Open protocol
+ Expand
4

Regulation of OV90 and SKOV-3 Cells by miR-199a-3p

Check if the same lab product or an alternative is used in the 5 most similar protocols
OV90 and SKOV-3 cells were grown in 6-well plates to ~80% confluence. Subsequently, 20 nM miR-199a-3p mimics (5′-CCCAGUGUUCAGACUACCUGUUC-3′), mimics negative control (NC) (5′-GUUCCCCAACCUGUGUUCAGACU-3′), miR-199a-3p inhibitor (5′-AACAGGTAGTCTGAACACT-3′) or inhibitor NC (5′-TAACTGACAGGGACACTTA-3′), or 2 µg pcDNA-vector or pcDNA-YAP1 were transfected into cells at 37°C for 24 h using Lipofectamine® 2000 (Invitrogen; Thermo Fisher Scientific, Inc.). miR-199a-3p mimics, mimics NC, miR-199a-3p inhibitor, inhibitor NC, pcDNA-YAP1 and pcDNA-vector were purchased from Guangzhou RiboBio Co., Ltd. At 48 h post-transfection, the cells were harvested for subsequent experimentation.
+ Open protocol
+ Expand
5

Modulating miR-107 and TGFBR3 in Pancreatic Cancer

Check if the same lab product or an alternative is used in the 5 most similar protocols
Human PC cell lines (BxPC-3 and PANC-1) and normal pancreatic duct epithelial cell line (HPDE) were attained from the American Type Culture Collection (Manassas, VA). The total cells were cultured in RPMI-1640 medium with 10% fetal bovine serum (Gibco) in a standard humidified incubator containing 5% CO2 at 37°C.
The miR-107 mimic and the mimics negative control (miR-NC) were designed and purchased from Ribobio (Guangzhou, China). The pcDNA (Vector) and pcDNA- TGFBR3 overexpression (TGFBR3-OE) plasmids were designed and purchased from Ribobio (Guangzhou, China). The transfection of BxPC-3 and PANC-1 cells was performed with the mimic and plasmids by using Lipofectamine 2000 (Invitrogen) for 48 h. Transfection was conducted based on the manufacturer’s instructions. qRT-PCR analysis was carried out to verify the transfection effect.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!