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10 protocols using cd14 bv421

1

Multicolor Flow Cytometric Analysis of PBMCs

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PBMCs from the patients were washed in phosphate-buffered saline (PBS) and then incubated for 30 minutes in ice in the dark with Rh-123 (1 µM/mL). The cells were then washed twice with RPMI-1640 and incubated at 37°C for 2 hours. Then, cells were again washed with complete medium and PBS. Washed cells were stained for various cell surface markers such as CD3 PeCy7, CD4 APC, CD8 V500, CD14 BV421, and CD APC eflour 780 (all BD BD Biosciences, San Jose, CA). After staining, cells were washed twice in FACS buffer (1% fetal bovine serum–PBS) and acquired immediately by CytoFLEX S (Beckman Coulter, Indianapolis, IN) and analyzed by CytExpert Software, Beckman Coulter, Indianapolis, IN.
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2

Flow Cytometric Analysis of BSSL in Leukocytes

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Peripheral blood drawn in vacutainer tubes supplemented with sodium citrate as anticoagulant or freshly prepared buffy coat were used for flow cytometry. The samples (whole blood or buffy coat) were stained with fluorochrome-conjugated mouse anti-human monoclonal antibodies (CD14-BV421, CD15-PE-Cy7 and CD3 PE-Cy5) from BD Biosciences (Franklin Lakes, NJ, USA). Mouse anti-human BSSL mAb AS20 was conjugated to Alexa Fluor 647 (AS20-AF647) using the Alexa Fluor® Antibody Labeling Kit (Molecular Probes by Life Technologies, Thermo Fisher Scientific), according to the manufacturer´s instruction, and used to detect BSSL. Exogenous biotin-labelled BSSL (bio-BSSL) was detected using BD Horizon BB515 Streptavidin (BD Biosciences). To analyze antigens on the cell surface, the protocol for direct immunofluorescence staining of whole blood using a lyse/wash procedure was used, as previously described (www.bdbiosciences.com). To analyze intracellular markers, the cells were first permeabilized using BD FACS™ permeabilizing solution 2 (BD Biosciences) before staining was performed following the manufacturer’s instruction. Flow cytometry was performed on a FACS LSR II (BD Biosciences) and data were analyzed using FlowJo software (BD Biosciences). Leukocyte populations were defined as CD14+ monocytes, CD15+ granulocytes and CD3+ T lymphocytes, respectively.
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3

Multicolor Flow Cytometry for Leukocyte Profiling

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Whole blood was lysed by diluting in lysis buffer (1x) (Biolegend) and washed in cold FACS buffer to retrieve a leukocyte pellet. Cell populations were distinguished by fluorescently labelling using a previously optimised polychromatic staining panel; LIVE/DEAD® Fixable Blue Dead Cell Stain Kit (Invitrogen), CD18 PECy5, CD66b PERCPCy5.5, CD14 BV421, HLA DR BV510, CD15 605, CD20 AF700, CD19 APC Cy7, HLA DM PE, CD3 PECF594, and HLA ABC (BD Biosciences). Relevant fluorescence minus one (FMO) controls and negative controls were used to identify positively stained populations. Lymphocytes, monocytes and granulocytes were identified by size forward scattered light (FSC)/ side scattered light (SC]) and then further phenotyped into live CD3− CD14+ monocytes, CD3+ lymphocytes, CD3− CD19/CD20 expressing B cells and CD66b/CD15 positive neutrophils. Flow cytometry was performed on the Fortessa instrument (BD Biosciences) and data analysed using ‘Flow Jo’ (Tree Star) software.
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4

Generating CD14+ Monocytes from CD34+ Precursors

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CD14+ cells were cultured from haematopoietic cell precursors (CD34+) using a previously published protocol with minor modifications [35 (link)]. The culture cocktail contained X-VIVO10 (Lonza), Albumex (Seqirus) 0.05%, SCF (Peprotech) 200 ng/ml, GM-CSF (Peprotech) 0.03ug/ml, M-CSF (premium grade; Miltenyi Biotec) 5000U/ml, IL-6 (Peprotech) 10 ng/ml, FLT3 ligand (Peprotech) 50 ng/ml and gentamicin (Sigma Aldrich) 50 µg/ml. Calcitriol (1,25(OH)2vitamin D3; BioGems) was added at a physiological concentration of 0.1 nM. Cells were incubated at 37 °C with 5% CO2 for 1 week before replating at a density of 1 × 105 cells/ml of media. Media was then changed every third day by demi-depletion. Cells were harvested on day 21.
Harvested cells were centrifuged at 300×g for 5 min before the supernatant was removed. The cells were resuspended in 1 ml of chilled PBS, stained with 1 µl of LIVE/DEAD Fixable Aqua Dead Cell Stain (Life Technologies) and incubated on ice for 30 min. The cells were then washed and stained with the following antibody cocktail: CD45 BUV395 (BD Horizon), CD14 BV421 (BD), CD16 BV650 (BD), HLA-DR FITC (BD Pharmingen), CD34 PE (BD Pharmingen), CD11b APC (BD). FACS sorting was carried out on a BD Influx and CD14+ cells subjected to two washes with DPBS at 1000×g before storage at − 80 °C.
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5

Multiparametric Immune Profiling by Flow Cytometry

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Lymphocyte surface phenotypes were evaluated by flow cytometry on cryopreserved PBMCs: CD4-APC-H7, CD8-PErCP-Cy5.5, CD38-PCY-7, HLA-DR-BV421, CD45RA-APC-H7, CCR7- PECy5, LIVE/DEAD-V500, Granzyme B-PE, Perforin-FITC, CD16-APC, CD14-BV421, CD56-PE (BD Biosciences, San Jose, CA, USA) and CD19-PercPVio700, CD80-APC (Miltenyi Biotec, Bergisch Gladbach, Germany). Combinations used were: CD4/CD8/CD38/HLA-DR (T-cell activation), CD14/CD16 (monocyte), CD16/CD56/CD3 (NK cells), CD11c/CD3 (DC), CD3/CD19/CD80 (B-cell activation), CD4/CD8/CD45RA/CCR7 (T-cell maturation). T-cell subsets were defined as naïve CCR (C-C chemokine receptor)7+CD45RA+, central memory (CM) CCR7+CD45RA−, effector memory (EM) CCR7−CD45RA−, terminally differentiated (TD) CCR7−CD45RA+. T follicular helper (Tfh) CD4+CxCR5+CD45RA+, T helper 17-like (Th17) CD4+CCR6+CD161+, T regulatory-like (Treg) CD4+CD127-CD25+. Briefly, 1 × 106 PBMCs were stained with the appropriate antibodies for 20 min at 4°C in the dark and then washed and acquired using FACSVerse™ cytometer (BD Biosciences).
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6

Evaluating Metabolic and Immune Profiles

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Blood samples were obtained under ketamine (7–10 mg/kg, IM) or telazol (3–6 mg/kg, IM) following an overnight fast. Procedures were performed at baseline and repeated following cycles three and six of PRF. Serum and plasma were separated by centrifugation, frozen, and stored at −80 °C until analyzed. Serum and whole blood were sent to Antech Diagnostics (Irvine, CA, USA) to assess blood chemistry and complete blood count values and to Metabolon (Durham, NC, USA) for LC–MS metabolome profiling. Hemoglobin A1C assays were performed using the Siemens DVA Vantage® analyzer to obtain a quantitative measure of the percent concentration of HbA1C in blood. All physiological measurements were collected within 1 h of sedation.
A 4 mL sample of whole blood was kept in an EDTA tube on ice for flow cytometry. Briefly, blood was treated with ACK to remove RBCs, and stained with conjugated monoclonal Abs (CD20-APC.Cy7, Biolegend clone 2H7; CD3-PE.Cy7, BD clone sp34-2; HLA-DR-ECD, BD clone immu-357; CD14-BV421, BD clone M5E2; CD8-APC, Biolegend clone SK1; CD4-FITC, BD clone L200; CD16-PE.Cy5.5, Biolegend clone 3G8; CD1c-PE, Militenyi Biotech clone AD5-8E7; CD123-PerCP.Cy5.5, BD clone 9F5) and Aqua-live/dead-BV510 (Thermofisher Scientific, L34597) for 30 min on ice, and measured on a BD FACSAriaTM Fusion. Analysis was performed with FlowJo (BD, NJ, USA).
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7

Quantifying STAT Phosphorylation in Cells

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IL-6 and Oncostatin M (OSM) induced STAT3 phosphorylation was assessed in the human erythroleukemia TF-1 cell line. Erythropoietin-induced STAT5 phosphorylation was assessed in the human UT-7 cell line. IL-2 and IL-15 induced STAT5 phosphorylation was assessed in activated human T-cells. Detection of phosphorylated STATs was accomplished with the SureFire pSTAT5 or pSTAT3 Assay kit (Perkin Elmer, Hopkinton, MA) per standard manufacturer’s protocol, with the exception of an overnight incubation following addition of donor beads before detection on the EnVision (Perkin Elmer, Hopkinton, MA). IFNγ induced STAT1 phosphorylation was assessed in the CD14+ monocyte population in human PBMC by flow cytometry. CD14 BV421 was purchased from BD Biosciences (San Jose, CA). STAT1 PE (pY705) was purchased from ThermoFisher Scientific (Waltham, MA). IL-4 and IL-13 induced STAT6 phosphorylation and IL-31 induced STAT3 phosphorylation were assessed in adult human epithelial keratinocytes (HEKa, ThermoFisher Scientific, Waltham, MA) by flow cytometry. STAT6 PE (pY641) and STAT3 PE (Y705) were purchased from BD Biosciences (San Jose, CA).
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8

Dissociating GBM Tumor Tissue for Immune Cell Analysis

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De-identified surgically resected tumor tissue was collected from consented subjects under an IRB-approved protocol. GBM tumor tissue was collected within 1h of resection by the Duke Preston Robert Tisch Brain Tumor Center BioRepository. Specimens were dissociated in RPMI-1640 containing 100μg/mL Liberase-TM (Sigma-Aldrich) and 10μg/mL DNAse I (Roche) for 20min at 37°C with agitation. Single cell suspensions were filtered through 70μM and 40μM cell strainers (Olympus Plastics), washed in PBS (Gibco), and reconstituted in PBS containing 2% FBS (Sigma-Aldrich) with 1:20 Human Tru-Stain FcX™ block (Biolegend). Cell suspensions were stained with antibodies against CD45-BUV395 (BD Biosciences), CD14-BV421, CD33-BV510, HLA-DR-BV786, CD31-FITC, CD3/19-BUV737, CD11b-APC, CD16-BV711, CD15-APC-fire7, and either CD155-PE and PD-L1-BV605 or isotype control-PE and -BV605 antibody (all BioLegend); followed by washing and reconstitution in 7-AAD containing PBS+2%FBS. Cells were gated for appropriate size on SSC-A and FSC-A; single cells by proportionate FSC-H and FSC-A size; live cells by 7-AADNeg; non-endothelial cells by CD31-FITC-ANeg; CD45 by CD45-BUV396-A+, non NK, B, or T Cells by CD56-BUV737-A-, CD19-BUV737-A-, and CD3-BUV737-A-; and for macrophages by CD11b-APC-A+, CD16-BV711-A+,and CD14-BV421-A+.
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9

Characterization of DC Subsets

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All DC populations (DCimm, DCmat, DCmat/LPS, DCmat/CpG, DCmat/CD40LT) were surface stained to determine immunophenotype using the following immunostaining Ab reagents and used for flow cytometry analysis: mouse-anti-human HLA-DR-FITC, CD80-PE, CD83-PECy7, CD3-Alexa-Fluor700, CD40-APC Cy7, CD86-APC, and CD11c-BV421, or CD14-BV421 (all BD Biosciences) and the respective matched isotype controls (BD Biosciences). An MDDC purity of >95% was determined by gating on (CD3, CD14) cells. Analysis was performed using an LSR Fortessa cytometer (BD Biosciences) and flow cytometry data was analyzed using FlowJo software (Tree Star). The supernatant of MDDC cultures at the end of the respective maturation conditions was collected and assessed for IL-12p70 (R&D Systems) and IL-10 (eBioscience) production after the final 24 h of culture.
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10

Isolation and Characterization of Myeloid-Derived Suppressor Cells

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Heparin-containing tubes were used to collect peripheral blood samples from healthy donors and cancer patients. Then, PBMC were separated from the peripheral blood by density gradient centrifugation method using Ficoll-Paque Plus medium and SepMate-50 tubes (STEMCELL Technologies).
The PBMC were stained for 20 min at 4°C with the following anti-human antibodies: lineage marker (Lin) (CD3, CD19, CD20, CD56 PE [BD Biosciences]), HLA-DR PerCP (BD Biosciences), CD11b BV710 (BD Biosciences), CD33 BB515 (BD Biosciences), CD14 BV421 (BD Biosciences), and CD15 BV510 (BD Biosciences). Isotype-matched antibodies were used as controls. Flow cytometric analysis was performed using a BD LSRFortessa X-20 device, and cell sorting was performed using a FACSAria III instrument (BD Biosciences). The data were analyzed with FlowJo software (BD Biosciences). We used the established phenotypes for the MDSC analysis.[ 111617181920212223 ] CD11b + CD33 + Lin -HLA-DR -/low cells were defined as total MDSC. Then, the total MDSC were divided into three subsets including M-MDSC (CD11b + CD33 + Lin -HLA-DR -/low CD14 + CD15 -), G-MDSC (CD11b + CD33 + Lin -HLA-DR -/low CD14 -CD15 + ), and I-MDSC (CD11b + CD33 + Lin -HLA-DR -/low CD14 -CD15 -).
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