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5 protocols using mab3126

1

Studying Protein Modifications in Cells

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The following primary antibodies were used: mouse anti-Calnexin (Millipore, MAB3126, RRID: AB_2069152), mouse anti-Tubulin (Sigma, T5168, RRID: AB_477579), mouse anti-Actin (Millipore,MAB1501, RRID: AB_2223041), rat anti-HA-HRP (Roche, 12013819001, RRID: AB_390917), mouse anti-Myc (SIGMA, 9E10 M4439, RRID: AB_439694), mouse anti-Ubiquitin (Enzo, P4D1, PW0930, RRID: AB_1181462), rat anti-HA (Roche, 3F10, RRID: AB_390918), rabbit anti-Giantin (Abcam, ab24586, RRID: AB_448163), anti-GM130 (BD, clone35, RRID_398141), anti-FLAG (Sigma, M2, RRID_259529). The anti-HA affinity gel (Roche, 1815016001, RRID: AB_390914) or anti-MYC affinity agarose (Pierce, PIER20169) were used for immunoprecipitation.
Drugs were used as follows: MG132 at 10 µM (Sigma, C2211), 4 h at 37°C; Palmostatin B at 1 µM (Calbiochem, 178501), indicated time at 37°C; 2-Bromopalmitate at 100 µM (2-BP; Focus Biomolecules, FBM-10-3284), indicated time at 37°C.
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2

Studying Protein Modifications in Cells

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The following primary antibodies were used: mouse anti-Calnexin (Millipore, MAB3126, RRID: AB_2069152), mouse anti-Tubulin (Sigma, T5168, RRID: AB_477579), mouse anti-Actin (Millipore,MAB1501, RRID: AB_2223041), rat anti-HA-HRP (Roche, 12013819001, RRID: AB_390917), mouse anti-Myc (SIGMA, 9E10 M4439, RRID: AB_439694), mouse anti-Ubiquitin (Enzo, P4D1, PW0930, RRID: AB_1181462), rat anti-HA (Roche, 3F10, RRID: AB_390918), rabbit anti-Giantin (Abcam, ab24586, RRID: AB_448163), anti-GM130 (BD, clone35, RRID_398141), anti-FLAG (Sigma, M2, RRID_259529). The anti-HA affinity gel (Roche, 1815016001, RRID: AB_390914) or anti-MYC affinity agarose (Pierce, PIER20169) were used for immunoprecipitation.
Drugs were used as follows: MG132 at 10 µM (Sigma, C2211), 4 h at 37°C; Palmostatin B at 1 µM (Calbiochem, 178501), indicated time at 37°C; 2-Bromopalmitate at 100 µM (2-BP; Focus Biomolecules, FBM-10-3284), indicated time at 37°C.
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3

Immunoprecipitation and Western Blotting Techniques

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The following primary antibodies are used: mouse anti-Calnexin (Millipore, MAB3126, RRID: AB_2069152), mouse anti-Tubulin (Sigma, T5168, RRID: AB_477579), mouse anti-Actin (Millipore,MAB1501, RRID: AB_2223041), rat anti-HA-HRP (Roche, 12013819001, RRID: AB_390917), mouse anti-Myc (SIGMA, 9E10 M4439, RRID: AB_439694), mouse anti-Ubiquitin (Enzo, P4D1, PW0930, RRID: AB_1181462), rat anti-HA (Roche, 3F10, RRID: AB_390918), rabbit anti-Giantin (Abcam, ab24586, RRID: AB_448163), anti-GM130 (BD, clone35, RRID_398141), anti-FLAG (sigma, M2, RRID_259529). The anti-HA affinity gel (Roche, 1815016001, RRID: AB_390914) or anti-MYC affinity agarose gel (Pierce, PIER20169) were used for immunoprecipitation.
Drugs were used as follows: MG132 at 10 µM (Sigma, C2211), 4 h at 37°C. Palmostatin B at 1 µM (Calbiochem, 178501), indicated time at 37°C. 2-Bromopalmitate (2-BP; Focus Biomolecules, FBM-10-3284) at 100 µM at 37°C during the indicated time.
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4

Protein Expression Detection Methods

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Expression of proteins were detected using antibodies against mouse lamin A/C (SAB4200236, Sigma‐Aldrich, St. Louis, MO, USA), human lamin A (MAB3540, Millipore, Burlington, MA, USA), Sarcolipin (ABT13, Millipore), β‐tubulin (ab179513, Abcam, Cambridge, UK), FLAG (F7425, Sigma‐Aldrich), HA (H6908, Sigma‐Aldrich), lamin B1 (ab133741, Abcam), lamin B (sc‐6217, Santa Cruz, Dallas, TX, USA), Calnexin (MAB3126, Millipore), Calreticulin (PA3‐900, Thermo Fisher Scientific), SERCA2 (4388, Cell Signaling, Danvers, MA, USA), β‐ACTIN (A5441, Sigma‐Aldrich), Grp78 (ab108613, Abcam), Chop (2891, Cell Signaling), eIF2α (2103, Cell Signaling), phospho‐eIF2α (3398, Cell Signaling), Atf4 (SC‐200, Santa Cruz), IRE1α (3294, Cell Signaling), phospho‐IRE1α (PA1‐16927, Thermo Fisher Scientific), and Gapdh (GTX100118, GeneTex, Hsinchu, Taiwan).
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5

Western Blot Protein Detection Protocol

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25 µg of gradient-purified fractions were loaded onto a BoltTM 4–12% Bis-Tris Plus gels using a Mes buffer (Invitrogen), according to the manufacturer’s instructions. After wet electrophoretic transfer onto a Polyvinylidene Difluoride (PVDF) membrane, the membrane was blocked in a PBS containing 0,1% Tween 20 (v/v) and 5% (w/v) non-fat dried milk for 1 hour at room temperature, then soaked in a primary antibody diluted in PBS + 0,1% Tween 20 + 1% milk for 1 hour at room temperature. After three washes in PBS + 0,1% Tween 20, membranes were soaked in a secondary antibody diluted in PBS + 0,1% Tween 20 + 1% milk for 1 hour at room temperature. Membranes were processed for chemiluminescence detection using SuperSignalTM West Dura Extended Duration Substrate (Thermo Scientific), according to manufacturer’s instructions. The immuno-reactive bands were visualized using the Amersham Imager 600 (GE Healthcare Life Sciences).
The primary antibodies were: mouse VDAC1, 1:200 (Santa Cruz Biotechnologies, Inc., SC-58649), mouse anti-Golgin-97, 1:1000 (Molecular Probes®, A21270) and mouse anti-Calnexin, 1:3000 (Millipore, MAB 3126) and 1:1000 polyclonal rabbit anti-IP3R Ab Rbt475 (recognizing all three IP3R isoforms; a kind gift of Dr J.B. Parys30 (link)).
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