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3 protocols using cd24 buv395

1

Murine Immune Cell Phenotyping

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Murine: I-A/I-E-BV421, B220-BV605, F4/80-BV711, Sirpα-PE-Cy7, CD45-FITC, TCR Vβ5.1, 5.2-APC, BV421-CD4, PE-Cy7 CD8a, PerCP-Cy5.5-CD11b, CD40-BV786, H2Kb/H-2Db-Alexa647 (BioLegend); TLR7-PE, CD24-BUV395, CD80-BUV737, F4/80-BV421, CD11b-APC (BD); and eBioscience Fixable Viability Dye eFluor 780 (Thermo Fisher Scientific). Western blotting: TRIF (Genentech,), MYD88 (Abcam), β-actin (Cell Signaling Technologies). Human: CD64-APC, CD80-BV786 (BD); CD163-FITC, B2M-PE, CD209-APC (DC-SIGN); CD86-PE, CD80-PE-Cy7 (BioLegend); and CD14-PerCP-eFluor 710, CD81-FITC (Invitrogen). LIVE/DEAD Fixable Aqua Dead Cell dye and LIVE/DEAD Fixable Blue Dead Cell Stain Kit for UV excitation were from Thermo Fisher Scientific.
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2

Multiplex Protein Expression Analysis

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Antibodies used for western blotting include GAD1/2, EphA2, PDGFR (Cellsignal®), E-cadherin (BD Biosciences), Vimentin (SantaCruz), OVOL2, CBFA2T2, SOX2, ASCL1, POU5F1, GAPDH, SOX2, FYN, beta-actin (Sigma®). Fluorophore-conjugated primary antibodies were used for flow cytometry – CD56 BV605, CD151 PE, CD24 BUV395 (BD Biosciences), CD44 Pacific blue, E-cadherin Pacific blue (Cellsignal®), CADM1 A647 (MBL), EPHA2 A488 (R&D Systems), CD133 PE-Cy7 (Biolegend), Vimentin (Santacruz);
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3

Resetting KiPS Cells for Analysis

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KiPS chemical resetting to naive at passage 6–7 were dissociated into single cells using TrypLE and passed through 50‐μm cell strainers (VWR). Conjugated antibodies and Fixable Viability Dye‐eF780 (eBioscience) were mixed with 50 μl of Brilliant stain buffer (BD Biosciences, 566349) and applied to 50 μl of cells (500,000 cells per reaction). Cells were incubated for 30 min at 4°C in the dark and washed with 2% foetal bovine serum (FBS) in PBS and centrifuged at 300 g for 3 min. Cells were resuspended in 2% FBS in PBS and analysed with a BD FACSAria Fusion for cell sorting. The following fluorescent conjugated antibodies and flow cytometer laser and filter settings were used: CD24‐BUV395 (BD Bioscience, 563818, 1.25 μl per test; detected using the 355‐nm laser with 379/28 filters), CD90.2‐APC‐Cy7 (BD Bioscience, 561641, 2.5 μl per test; 640‐nm laser with 780/60 filters), Fixable Viability Dye‐eF780 (ThermoFisher, 65‐0865‐14, 0.6 μl per test; 640‐nm laser with 780/60 filters) and SUSD2‐FITC (MACS Miltenyi Biotec, 130‐106‐327, 0.25 μl per test; 488‐nm laser with 530/30 filters).
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