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12 protocols using probenicid

1

Calcium Flux Assay for Cell Signaling

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Calcium flux was performed as previously described (24 (link)). Briefly, cells were incubated with 5 mM Indo-1 dye (Invitrogen) and 0.5 mM Probenicid (Sigma-Aldrich) in RPMI without phenol red for 45 min at 37°C. Cells were washed with RPMI, re-suspended in RPMI, and incubated at 37°C for 5 min before Ca2+ measurement. A baseline reading was taken for 30 s and cells were stimulated adding CCL21 (100 ng/mL). Samples were analyzed with an LSRFortessa (BD Biosciences) with a UV laser, and data were analyzed with FlowJo software. Calcium increases were monitored as the ratio of Indo-1 (blue) and (violet) emission and displayed as a function of time.
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2

Calcium Imaging of GHRHR Cells

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GC-GHRHR cells, transiently transfected with wt-hGH and treated for 24 h with 5 mM butyrate, were plated in half-area clear bottom 96-well plates (Corning, CA, USA) at 753 cells/well. 24 h later, following two washings with OPTIMEM medium +2.5 mM probenicid (Sigma-Aldrich, Buchs, Switzerland), cells were incubated with 2 µg/mL Fluo-4 AM (Invitrogen, LifeTechnologies, Basel, Switzerland) and Pluronic F-127 0.025% (w/v) (Invitrogen, LifeTechnologies, Basel, Switzerland) for 30 min in dark at 37°C. After washing twice with OPTIMEM medium, cell measurement was performed on a Synergy-4 instrument (BioTek, Highland Park, VT, USA) with an excitation band of 485/20 nm and fluorescence was measured at 528/20 nm. Baseline signal (F0) was recorded during 5 min before the addition of each stimulus. Subsequently, continuous fluorescence measurements were performed for 20 to 30 min. Ionomycin (Calbiochem, San Diego, CA, USA) stimulation was used as a positive control. Results are shown as F/F0 ratios after background subtraction, where F was the fluorescence signal intensity and F0 was the baseline as calculated by averaging the ten frames before stimulus application.
For [Ca2+]i measurements in siRNA-treated cells, cells were further transfected with wt-hGH 48 h post-siRNA transfection and treated with 5 mM butyrate. After 24 h cells were seeded and treated as mentioned above.
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3

Neurovascular Co-culture Assay for BBB Integrity

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Astrocyte cells (C6, rat astrocyte cell line) and endothelial cells (bEnd.3, mouse endothelial cell line) were from ATCC (Manassas, VA, USA). Cell culture inserts for 24-well plates (transparent PET membrane transwells, 0.4 µm pore size) were obtained from Dominique Dutscher (Alsace, France). Imaging Plate FC, 24-well plates, TC-surface was purchased from Ozyme (Saint Quentin Yvelines, France). The EVOM voltohmmeter system was from World Precision Instruments (Hertfordshire, UK). ZO-1 antibodies were from Life Technologies (cat 40-2200; Saint Aubin, France) and claudin-5 antibodies were from ABCAM (ab15106; Paris, France). P-gp and MRP-1 antibodies were from GeneTex (GTX23364; San Antonio, TX, USA) and Santa Cruz Biotechnology (sc-13960; Dallas, TX, USA), respectively. Standard protein and all compounds for Ringer HEPES buffer, BCECF-AM, probenicid, verapamil, sodium fluorescein (Na-Fl), were from Sigma-Aldrich (St. Quentin Fallavier, France). Rhodamine-123 was from Thermo Fisher Scientific (Eugene, OR, USA). Hydralazine, MTT kit and Dulbecco’s Modified Eagle’s Medium (DMEM) were also from Sigma-Aldrich. Antibodies and reagents for the detection of HIF-1α were products of R&D systems (Lille, France). YC-1 was purchased from VWR International (Fontenay-sous-Bois, France).
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4

Quantification of Vacuolar Escape

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Quantification of vacuolar escape using the β-lactamase/CCF4 assay (Life technologies) was performed as previously described [33 (link)]. Briefly, bone marrow-derived macrophages seeded onto non-treated plates were infected as described above for 2 h, washed and incubated in CCF4 for 1 h at room temperature in the presence of 2.5 mM probenicid (Sigma). Propidium iodide negative cells were considered for the quantification of cells containing cytosolic F. novicida using excitation at 405 nm and detection at 450 nm (cleaved CCF4) or 510 nm (intact CCF4).
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5

Monoiodoacetate-Induced Knee OA in Rats

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Monoiodoacetate (Cat# 305533, Sigma-Aldrich, USA) was used for the induction of knee OA in rats. The drugs used in the study were Probenicid (Cat# P8761, Sigma-Aldrich, USA) and L-carnitine (Cat# C0158, Sigma-Aldrich, USA). Each assay’s kits and antibodies are mentioned below along with details.
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6

Quantifying Cytosolic Bacterial Escape

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Quantification of vacuolar escape using the β-lactamase-CCF4 assay (Life technologies) was performed following manufacturer’s instructions. Briefly, macrophages seeded onto non-treated plates were infected as previously described for 1 h, washed and incubated in CCF4 for 1 hour at room temperature in the presence of 2.5 mM probenicid (Sigma). Propidium iodide negative cells were considered for the quantification of cells containing cytosolic F. novicida using excitation at 405 nm and detection at 450 nm (cleaved CCF4) or 510 nm (intact CCF4).
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7

TEM1 β-Lactamase Secretion Assay

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The TEM1 β-lactamase secretion assay was performed essentially following the same protocol as described before25 (link). In brief, 1.5 × 105 J774 cells/well were seeded onto BD Falcon 8-wells glass chambers slides (BD Biosciences, Bedford, MA, USA) and incubated overnight before infected with the indicated bacterial strain. After 2 h of infection, cells were washed and incubated further with 5 µg/ml of gentamicin (defined as time point zero). After 30 min, cells were washed and after an additional 18 h, washed and loaded with CCF2/AM (Invitrogen, CA, USA) and Probenicid (Sigma). Translocation of β-lactamase fusions was determined with a live-cell imaging microscope (Nikon Eclipse Ti-E) equipped with a Nikon DS-U2/L2 camera, using a Chroma beta-lactamase double filter. For statistical analysis of blue vs, green fluorescent cells, an average of 3,000–6,000 cells that included pictures from three experiments for a given strain was counted.
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8

Quantifying Cytosolic Bacterial Escape

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Quantification of vacuolar escape using the β-lactamase-CCF4 assay (Life technologies) was performed following manufacturer’s instructions. Briefly, macrophages seeded onto non-treated plates were infected as previously described for 1 h, washed and incubated in CCF4 for 1 hour at room temperature in the presence of 2.5 mM probenicid (Sigma). Propidium iodide negative cells were considered for the quantification of cells containing cytosolic F. novicida using excitation at 405 nm and detection at 450 nm (cleaved CCF4) or 510 nm (intact CCF4).
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9

Monoclonal Antibodies and Molecular Probes for Cell Analysis

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The monoclonal antibody against vimentin, VI-01, was a kind gift from Dr. Draberova (IMG, Prague, CZ)39 (link). Anti-actin antibody (A2066) was purchased from Sigma-Aldrich (St. Louis, MO, USA). Rabbit monoclonal anti-P-glycoprotein (ab170904) and ceramide3 synthase-Anti-LASS3 polyclonal antibody (ab28637) were obtained from Abcam (Cambridge, UK), Abca1 (mAB10005) from Merck Milllipore Corporation (Darmstadt, DE) and Abcg1 (PA1-16804) from Thermo Fisher Scientific (Waltham, MA, USA). Transport inhibitors probenicid and cyclosporin A were obtained from Sigma-Aldrich, MK-571 from Enzo Lifescience (Farmingdale, NY, USA). Molecular probes ER-Tracker™ Blue-White DPX, LysoSensor™ Green DND-189, LysoTracker® Green DND-26, and the general oxidative stress indicator CM-H2DCFDA were purchased from Thermo Fisher Scientific. Paclitaxel was purchased from Sigma-Aldrich.
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10

T Cell Calcium Flux Measurement

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Cells were incubated in RPMI containing 5 mM Indo-1 dye (#I1223, Invitrogen) and 0.5 mM Probenicid (#P8761, Sigma) for 45 min at 37 °C. Cells were washed with RPMI, re-suspended in RPMI, and incubated at 37 °C for 5 min before Ca2+ measurement. Biotinylated anti-CD3ε (5 μg/ml) was added, and a baseline reading was taken for 30 sec before cross-linking with streptavidin (20 μg/ml). Samples were analyzed with an LSRFortessa (BD Biosciences) with a UV laser, and data were analyzed with FlowJo software. Calcium increases were monitored as the ratio of Indo-1 (blue) and (violet) emission, and displayed as a function of time. Responses were quantified from three experiments using the area under curve (AUC) function of PrismGraph.
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