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Eclipse te2000 inverted microscope

Manufactured by Nikon
Sourced in Japan, United States

The Eclipse TE2000 is an inverted microscope designed for advanced imaging applications. It features a stable and durable construction, providing a reliable platform for various microscopy techniques. The microscope's core function is to enable high-quality observation and imaging of samples.

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38 protocols using eclipse te2000 inverted microscope

1

Quantifying Septin Density on GUVs

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Confocal experiments were performed on a Nikon Eclipse TE2000 inverted microscope. The software EZ-C1 was used to make the acquisition of the confocal images. The imageJ radial profile plugin was used to analyze the fluorescence signal on the GUVs. Protein density was measured as described in supplementary material of Aimon et al.39 Briefly, the fluorescence signal of a reference fluorescent lipid (Oregon-Green® 488 DHPE) was measured on GUVs at known densities. The fluorescence of GFP-septins and Oregon-Green was subsequently compared in solution. Knowing the geometrical parameters of septin filaments and the relative fluorescence intensity of GFP and the reference fluorophore, we were able to deduce the density of septins bound to a GUV from the intensity of fluorescence signal.
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2

Antifungal Activity of Peptides

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Examination of the inhibitory effect of peptides on germination of F. graminearum conidia and U. maydis spores was performed in 96-well microtitre plates. A 3 µL solution of peptides or control PGM was added to 96 µL PGM supplemented with 1 µL (OD600 = 1) of F. graminearum conidia or U. maydis spores each expressing 3xGFP marker protein. Microtitre plates were incubated at 28°C at 150rpm in the dark and measured using spectrophotometry by relative absorbance at 595nm using a Multiskan GO spectrophotometer (Thermo Scientific). Inhibition studies of F. graminearum–3xGFP and U. maydis–3xGFP in culture were controlled microscopically using an Eclipse TE2000 inverted microscope (Nikon) as described above. GFP was excited with UV light using a HC Alexa488/EGFP filter (F36-525, EX: 472/30, DM: 495, BA: 520/35 BP).
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3

Quantifying Protein Co-localization on Cellular Vesicles

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HeLa cells were analysed under an Eclipse TE2000 inverted microscope (Nikon, Japan). Images were obtained with a charge-coupled device camera (Orca I; Hamamatsu) and processed with the Metamorph 6.1 software (Universal Images Corporation). Representative images of each experiment were acquired with the Olympus FV1000 confocal microscope and the FV 10-ASW 1.7 software (Olympus, Japan). Images were deconvoluted using the ImageJ software (NIH [http://rsb.info.nih.gov/ij]). The degree of co-localization between CCV and the proteins of interest was quantified in control and infected cells. The localization degree of the proteins under study with the CCV in phase contrast images was analysed by the Pearson coefficient. The correlation of fluorescent intensity to quantify co-localization of two proteins on the CCV was analysed by the Manders coefficient. Proteins were considered to co-localize when the values of the coefficients were above 0.5. The analysis was done using the JACoP plugin (Just Another Co-localization Plugin; NIH [https://imagej.nih.gov/ij/plugins/track/jacop2.html]) of the ImageJ software.
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4

Organoid Inhibitor Treatment and Analysis

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For western blot analysis of organoids after inhibitor treatment, gastric organoids at 3–5 days of growth were collected and dissociated into single cells using TrypLE Express. Cells were plated at a density of 20,000 cells/30 uL (6 drops/well) in a 6-well plate in 2 mL 50% L-WRN conditioned media and allowed to grow for 3 days before treating with DMSO or 50 nM GSK1120212 for 1, 6, and 24 hours. The Matrigel surrounding organoids was removed by Cell Recovery Solution (Corning). The released organoids were pelleted and lysed as previous described2 (link). For growth of organoids with inhibitor treatment, gastric organoids were dissociated and plated at a density of 3,000 cells/30 uL (1 drop/well) in duplicate in a 24-well plate in 500 uL 50% L-WRN conditioned media and treated with DMSO, 50 nM GSK1120212, and/or 5 uM SHP099 the following day. Bright-field pictures showing organoids growth were taken 5 days after treatment using a Nikon Eclipse TE2000 inverted microscope.
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5

Pollen Tube Growth Assay

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The assay was applied as described (Woriedh et al., 2013 (link)). Briefly, freshly collected pollen was immediately distributed onto Petri dishes containing droplets of 10 µL PGM at different pH values. Pollen tubes started to burst or to grow after about 10min. Pollen tubes were subjected to further studies only if germination rates exceeded 80%. After optimization, PGM at pH 5 was applied to all pollen tube assays. A 10 µL solution of the above peptides or acetonitrile as a negative control was added to each droplet of germinated pollen using a Cell-TramH Air pump (Eppendorf) and a glass micropipette. During this assay, droplets were observed using an Eclipse TE2000 inverted microscope (Nikon) equipped with a 1.4 Megapixel digital AxioCam MRm camera (black and white) and AxioVision digital image processing software (Release 4.8).
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6

Microscopic Evaluation of Cervical Cells Exposed to SW-AgNPs

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Changes in the morphology of cervical cells incubated with various concentrations of SW-AgNPs were analysed my microscopy 24 hours post treatment. Bright field images (20x) of the cells were captured using Eclipse TE2000 Inverted Microscope (Nikon).
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7

Microglial Cell Migration Assay

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A total of 400,000 BV-2 microglial cells were grown in six-well plates as 80% confluent monolayers and were wounded with a sterile 100 μl pipette tip. Thereafter, the cells were stimulated with 50 ng/ml LPS, 50 μM XBD173, 50 ng/ml LPS + 50 μM XBD173, or ethanol as solvent control. Migration into the open scar was documented with microphotographs taken at different time points after wounding using a Nikon ECLIPSE TE2000 inverted microscope (Nikon, Tokyo, Japan). The number of migrating cells was quantified by counting all cells within a 0.4 mm2 region in the center of each scratch. The number of migrated cells was then normalized to the average cell density to account for changes in proliferation. A minimum of five individual cultures was used to calculate the mean migratory capacity of each cell culture condition.
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8

Imaging and Oil Red O Staining

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Cells were imaged on the 6-well plate at 10× magnification with a set scale of 100 μm using Nikon eclipse TE2000 inverted microscope. Another set of cells was used for Oil Red O staining. Briefly, cells were washed twice with 1X DPBS. Cells were then fixed in 10% phosphate-buffered formalin for 30 min at room temperature. After fixation, the cells were washed twice again with 1X DPBS and then treated with Oil Red O, four parts ddH2O with six parts Oil Red O solution (Sigma-Aldrich), for 15 min. Each well was gently washed 5 times with ddH2O and then imaged (22 (link)).
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9

Monitoring Single-Cell ROS Dynamics

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To monitor single‐cell ROS dynamics, time‐lapse imaging experiments were performed using a Nikon Eclipse TE‐2000 inverted microscope equipped with a Nikon Perfect Focus System and a Hamamatsu Orca ER camera under conditions of controlled temperature (37°C), atmosphere (5% CO2), and humidity (90–100%). Cells were excited at both 432 and 475 nm (5% intensity and 150 ms exposure) with 432/36–25 nm and 475/25–25 band‐pass filters, a 550‐nm dichroic mirror, and a 536/40–25 nm emission filter. Images were acquired every 15 min with a 20× Nikon plan apo objective (NA 0.75). Ratiometric readouts of F475 nm/F432 nm were acquired to report ROS levels. To quantify cell death kinetics, time‐lapse imaging experiments were performed using the IncuCyte S3 Live‐Cell Analysis System (Essen BioScience) with a 10× objective at 37°C and 5% CO2. Bright‐field and green fluorescent channels were used to capture cellular morphology and YOYO‐1 iodide fluorescence signal, respectively. To monitor the intracellular Ca2+, Fluo‐4 AM, cells were excited at 475 nm (5% intensity and 200 ms exposure) with 475/35–25 band‐pass filter, a 500‐nm dichroic mirror, and a 536/40–25 nm emission filter. Image analyses and quantifications of cell death based on YOYO‐1 iodide fluorescence signal were performed using the analysis tool in the IncuCyte S3 Live‐Cell Analysis System.
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10

Assessing Pancreatic Acinar Cell Death

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Cell death was determined in primary pancreatic acini by PI uptake. Briefly, cells were treated with the experimental reagents for 3 h and then cells were labeled with PI (2 μg/ml medium) for 10 min, washed with PBS to remove excess of PI, and lysed in RIPA buffer (50 mmol/L Tris (pH 7.4), 150 mmol/L NaCl, 1% Triton X-100, 0.5 % deoxycholic acid, 0.1 % SDS, supplemented with protease and phosphatase inhibitors (Complete™ ULTRA and PhosSTOP™, Sigma-Aldrich). PI fluorescence was measured by fluorometry at 535/617 nm, and values normalized to those of total protein concentration in cell lysates. PI uptake in damaged acinar cells was further confirmed by assessing nuclear PI staining (indicative of compromised plasma membrane) in live acinar cells labeled with 2 μg/ml propidium iodide (PI) and 0.5 μg/ml Hoechst 33342 in PBS using a Nikon Eclipse TE2000 inverted microscope (data not shown).
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