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38 protocols using fr180204

1

Proteasome Inhibition and ERK Signaling

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Equivalent numbers (300 000 cells) of relevant cells were seeded on six-well plates and treated with DMSO (Vehicle), 20 nM of the survival signal TPA (Sigma-Aldrich), 1 μM of the proteasome inhibitor MG132 (Sigma-Aldrich), a combination of TPA and MG132 (TPA/MG132), 20 μM of the ERK1/2 kinase inhibitor FR180204 (Sigma-Aldrich), or a combination of TPA and FR180204 (TPA/FR180204) for 24 h following IC50 determination. Equivalent concentrations of total proteins from the cells were separated on a PAGE-gel and probed with an anti-BST-2 antibody (AIDS reagents program), anti-cleaved Cas3, anti-BIM, and anti-GAPDH antibodies (Santa Cruz Biotechnology, Dallas, TX, USA), as well as with anti-ERK1/2, anti-pERK1/2, anti-pJNK, anti-pAKT S473 and anti-pBIM antibodies (Cell Signaling). The species-appropriate IRDye secondary antibodies were used followed by detection with the Odyssey Infrared Imaging System (LI-COR Biosciences).
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2

TLR4/2 Signaling Inhibitors Protocol

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The TLR4 signaling inhibitor CLI-095 (#tlrl-cli95, TAK-242), and the TLR2+4 inhibitor OxPAPC (#tlrl-oxpap1) were purchased from Invivogen (San Diego, USA). ERK 1/2 inhibitor FR180204 (#SML0320), rotenone, dimethylsulfoxid (DMSO), ionomycin and PMA were obtained from Sigma-Aldrich.
rotenone was freshly prepared and dissolved in DMSO prior to the experiments. DMSO concentration in cell culture media did not exceed 0.5%. Argon was purchased in fixed gas mixtures (argon 25, 50 or 75 Vol%, oxygen 21%, respective rest nitrogen) from Air Liquide (Kornwestheim, Germany).
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3

Inhibition of PDGF and EGF Signaling

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Sunitinib, erlotinib, U0126 (all purchased from Cell Signaling Technology, Danvers, MA, USA) and FR180204 (Sigma-Aldrich, St. Louis, MO, USA) were prepared as a 20 mM stock solution in dimethyl sulfoxide (DMSO) and stored at −20 °C. PDGF-BB (Cell Signaling Technology) was prepared at a concentration of 100 µg/mL in 20 mM citric acid (pH 3.0) supplemented with 0.8% BSA (bovine serum albumin) and stored at 4 °C. EGF (Sigma-Aldrich) was prepared at a concentration of 100 µg/mL in 10 mM HCl and stored at 4 °C. For the determination of proliferative activity, concentrations of protein kinase inhibitors (PKIs) ranging from 0.001 to 10 μM and PDGF-BB concentrations of 0.25 and 10 ng/mL were tested. For Western blot analyses, PKI concentrations ranging from 0.05 to 10 μM, PDGF-BB concentrations of 10 and 30 ng/mL and EGF concentrations of 40 and 100 ng/mL were used.
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4

Inhibition of Signaling Pathways in CB-1 Cells

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Differentiated CB-1 cells were preincubated with P38, ERK, and PKA signal inhibitor at 37 °C for 30 min and treated with 100 nM of CXCL12 for 2 h. SB203580 (#5633; Cell Signalling Technology) as a P38 inhibitor, FR180204 (#0320; Sigma-Aldrich) as an ERK inhibitor, and H89 (#9844; Cell Signalling Technology) as a PKA inhibitor were adjusted to a final concentration of 10, 25, and 10 μM, respectively. At the end of the reaction, cell lysate was harvested using RLT buffer and RNeasy Mini kit. Extracted RNA was reverse transcribed to cDNA and examined with qRT-PCR to detect UCP-1 mRNA expression.
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5

Fibroblast Growth Signaling Inhibitors

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Ang II, ET-1, PD123319, gallein (Gβγ inhibitor), and BQ788 were obtained from Tocris Bioscience (Ellisville, MO, USA). Recombinant human TGF-β1, valsartan, bosentan, ambrisentan, LY2109761, FR180204, and SB203580 were obtained from Sigma Aldrich (Saint Louis, MO, USA). SIS3 (Smad3 inhibitor) and FR900359 (Gαq inhibitor) were obtained from Cayman Chemical (Ann Arbor, MI, USA). Fibroblast growth medium and related cell culture reagents were obtained from Promocell (Heidelberg, Germany).
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6

Peptide Treatments in Disease Model

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PAR4-AP (AYPGKF-NH2) and corresponding scrambled peptide (YAPGKF-NH2) were from Peptides International, Inc. (Louisville, KY, USA). Disulfide HMGB1 peptides were from HMGBiontech (Milano, Italy). N-Acetylcysteine amide was purchased from Tocris (Minneapolis, MN, USA). FR180204 was from Sigma-Aldrich. H&E staining reagents were from Fisher Scientific. The rest of the materials used were from Sigma-Aldrich or as described in the methods.
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7

Canine Inflammatory Biomarker Quantification

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Canine recombinant IL-1β and NGAL were purchased from Kingfisher Biotech, Inc. (Saint Paul, MN) and United States Biological (Salem, MA), respectively. TRIzol, anti-zonaoccludin-1 (ZO-1) mouse monoclonal antibody (Clone: ZO-1-1A12), Alexa Fluor 488-conjugated F(ab′)2 fragments of goat anti-rabbit IgG (H+L), Alexa Fluor 594-conjugated F(ab′)2 fragments of goat anti-mouse IgG (H+L), TO-PRO-3-iodide, and ProLong Gold Antifade Reagent were purchased from Life Technologies Co. (Carlsbad, CA). PrimeScript RT Master Mix and SYBR Premix Ex Taq II were obtained from TaKaRa Bio Inc. (Shiga, Japan). Rabbit monoclonal antibodies against E-cadherin (Clone: 24E10) were purchased from Cell Signaling Technology Japan (Tokyo, Japan). The mitogen-activated protein kinase (MAPK) inhibitors FR180204, SB239063, SP600125, and U0126, and the IκB kinase inhibitors BAY-117082 and 2-[(aminocarbonyl)amino]-5-(4-fluorophenyl)-3-thiophenecarboxamide (TPCA-1) were purchased from Sigma-Aldrich Inc. (St Louis, MO). The NGAL assay kit was purchased from BioPorto Diagnostics A/S (Hellerup, Denmark). StatMate IV was purchased from ATMS (Tokyo, Japan). Culture plates, dishes, and flasks were obtained from Thermo Fisher Scientific, Inc. (St. Waltham, MA).
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8

Inhibiting MAPK and Neutrophil Trafficking

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The MAPK inhibitors FR180204 (ERK1/2 MAPK; 30 mg/kg body weight i.v.), SB202580 (p38 MAPK; 30 mg/kg body weight i.v.), or SP600125 (JNK MAPK; 30 mg/kg body weight i.v.; Sigma Aldrich GmbH, Taufkirchen, Germany) were used to characterize the functional relevance of MAPK for uPA‐PAI‐1‐elicited neutrophil trafficking. A NE inhibitor (sivelestat; 150 µM; Sigma Aldrich) was used to evaluate the role of NE for 4T1 tumor cell proliferation. The competitive small‐molecule WX‐340 (10 mg/kg body weight i.p. for invivo experiments; Heidelberg Pharma AG, Ladenburg, Germany) was used to inhibit heteromerization of uPA and PAI‐1.
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9

Bik-Induced Cell Signaling Modulation

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293 and 231 cells were transfected with same amount of pUK21-BikDD or pUK21-BikDDA. 16 hours later, cells were treated with pharmacological inhibitors as indicated and the harvested cells were lysed. Cell lysates were subjected to SDS–PAGE and protein bands were transferred to a polyvinylidene difluoride membrane (PVDF, Millipore, MA, USA). Primary Antibodies against Bik (sc-10770, Santa Cruz, CA, USA), β-actin (sc-47778, Santa Cruz, CA, USA), pospho-ERK1/2(#9106, Cell signaling technology, USA) and ERK1/2(#9102, Cell signaling technology, USA) and HRP-conjugated secondary antibodies (ab6721, ab6728; Abcam) were used. The immunoreactive bands were visualized with a chemiluminescent substrate (Santa Cruz, CA, USA). The relative protein expressions were analyzed by Gel pro software.
Pharmacological inhibitors: UO126 (5 μM, Beyotime, China), FR180204 (0.6 μM, Sigma, St. Louis, MO, USA), MG132 (10 μM, Beyotime, China) and cycloheximide (1 mM, Sigma, St. Louis, MO, USA) were utilized.
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10

Peptide-induced Inflammation Modulation

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PAR4-AP (AYPGKF-NH2; to elicit BHA) and corresponding scrambled peptide (YAPGKF-NH2; as control) were from Peptides International, Inc. (Louisville, KY). N-Acetylcysteine amide was purchased from Tocris (Minneapolis, MN). FR180204, ethyl pyruvate and methyl cellulose were from Sigma-Aldrich. H&E staining reagents were from Fisher Scientific. Mouse HMGB1 enzyme-linked immunosorbent assay (ELISA, MBS2701751) kits were obtained from MyBioSource, Inc. (San Diego, CA). The rest of the materials used were from Sigma-Aldrich or as described in the methods.
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