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11 protocols using ab119992

1

Integrin-Mediated Signaling Pathway Analysis

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Anti-FAK (D2R2E; Cell Signaling Technology), anti-pFAK (D20B1; Cell Signaling Technology), anti-integrin β3 (ab119992; Abcam), anti-MMP2 (ab92536; Abcam), anti-MMP9 (ab76003; Abcam), anti-integrin αv (ab179475; Abcam), anti-integrin α2b (ab134131; Abcam) and anti-GAPDH (ab181602; Abcam) antibodies were used as primary antibodies and a horseradish peroxidase (HRP)-conjugated goat anti-rabbit IgG (ZB2301; Zhongshan Biotechnology) was used as the secondary antibody for Western blotting. The anti-integrin αvβ3 antibody (ab78289; Abcam) and the anti-integrin α2bβ3 antibody (ab11027; Abcam) were used to inhibit the function of integrin αvβ3 and integrin α2bβ3 fin vitro, respectively. The anti-integrin β3 (ab119992; Abcam), anti-integrin αv (ab179475; Abcam), and anti-integrin α2b (ab134131; Abcam) were used for immunoprecipitation.
The specific integrin inhibitor cyclo(Arg-Gly-Asp-d-Tyr-Lys) peptides (cyclo(RGDyK)(S7844; Selleck Chemicals) was used for disturbing the function of integrin. The FAK specific inhibitor PF-573228 (S2013; Selleck Chemicals) and ERK inhibitor Magnolin (S9102; Selleck Chemicals) were used to study FAK-MAPK signaling.
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2

Immunoblotting Analysis of Integrin, Signaling Proteins

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Samples were solubilized with an equal volume of loading buffer (125 mM Tris/HCl, pH 6.8, 4% sodium dodecyl sulfate, 20% glycerol, 0.05% Bromophenol Blue, 5% β-mercaptoethanol) and were boiled for 10 min, then samples were separated by SDS/PAGE, followed by transferring to PVDF membranes and detecting by immunoblotting with primary antibodies against human integrin αvβ3 (Abcam, ab119992, 1:500, Cambridge, U.K.), Galectin-3 (CST, 87985, 1:1000, Boston, U.S.A.), KRAS (Abcam, ab180772, 1:200, Cambridge, U.K.), RalB (CST, 3523, 1:1000, Boston, U.S.A.), TBK1 (CST, 3504, 1:1000, Boston, U.S.A.), p-TBK1 (CST, 5483, 1:1000, Boston, U.S.A.), respectively, at 4°C overnight. Then HRP–conjugated secondary antibody (CST, Boston, U.S.A.) was incubated for 1 h at room temperature, and visualized by using ECL detection kit (CST, Boston, U.S.A.). β-actin (CST, 58169, 1:1000, Boston, U.S.A.) was used as an internal control.
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3

Western Blot Analysis of Cell Markers

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The samples were denatured and loaded into 8–12% SDS-polyacrylamide gel. The proteins were then transferred onto polyvinylidene fluoride (PVDF) membranes, blocked with milk at 25 °C for 1 h, and incubated with primary antibodies: CD61 (ab119992; 1:1000 dilution), CD14 (ab221678; 1:1000 dilution), and Melan-A (ab210546; 1:1000 dilution; all from Abcam) at 4 °C overnight. The PVDF membranes were further incubated with horseradish peroxidase-conjugated secondary antibody (Thermo Fisher Scientific) and the blots were developed by using a West Pico PLUS Chemiluminescent Substrate kit (Thermo Fisher Scientific).
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4

Western Blot Analysis of Exosome Proteins

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The cells or exosomes were lysed with RIPA lysate (Sigma) to obtain proteins. The BCA Assay kit (Solarbio, Beijing, China) was used to determine the protein concentration. An equal amount of protein was added onto 10% SDS-PAGE gels, and the protein was then transferred onto polyvinylidene difluoride membranes (Roche, Basel, Switzerland). The blots were then incubated with primary antibodies, Anti-PI3Kγ antibody (1 : 1,000, ab32089, Abcam), Anti-CD163 antibody (1 : 1,000, ab213612, Abcam), Anti-CD206 antibody (1 : 1,000, sc-58986, Santa Cruz Biotechnology), Anti-PTEN antibody (1 : 1,000, ab267787, Abcam), Anti-AKT antibody (1 : 1,000, ab213612, Abcam), Anti-pAKT antibody (1 : 1,000, ab38449, Abcam), Anti-Vimentin antibody (1 : 1,000, ab20346, Abcam), Anti-α-SMA antibody (1 : 1,000, ab108424, Abcam), Anti-IL-10 antibody (0.5 µg/ml, ab134742, Abcam), Anti-CD63 antibody (1 µg/ml, ab38418, Abcam), Anti-CD61 antibody (1 : 1,000, ab119992, Abcam), Anti-HSP70 antibody (1 : 1,000, ab2787, Abcam), and anti-Actin (1 µg/ml, ab8286, Abcam) overnight at 4°C. The horseradish peroxidase-conjugated secondary antibody was then added to incubate the blots at room temperature for 2 h. At last, the blots were visualized with the Novex™ chemiluminescent substrate reagent kit (Waltham, MA, USA).
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5

Western Blotting Analysis of Key Proteins

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Western blotting analysis was performed as previously described [34 (link)] using antibodies against METTL3 (1:1,500; ab221795, Abcam), HOXA10 (1:2,000; A8550, Abclonal), ITGB3 (1:1,000; ab119992, Abcam), EMX2 (1:1,500; ab171818, Abcam) and GAPDH (1:6,000; KC-5G5, Aksomics). GAPDH was used as an endogenous control to normalize protein loading. The relative band intensities were measured using a quantitative scanning densitometer and image analysis software, ImageJ.
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6

Integrin Protein Expression Analysis

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Cells were lysed in whole cell lysis buffer (50 mM Tris-HCl pH7.4, 150 mM NaCl, 1 mM EDTA, 1% Triton X-100). Lysates were resolved on SDS-PAGE and Western blotted with antibodies for Kindlin3 (Abcam; #ab68040), Talin1 (Abcam; #ab71333) and integrinβ3/CD61 (Abcam; #ab119992).
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7

Integrin Blockade in Fibroblast Cells

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Fibroblast cells cultures were treated with 10 μg ml−1 of α5, β1, β3 integrins, or combinations of α5/β 1, αv/β3 blocking antibodies and were analysed after 24 h. The antibodies used are: β1 integrin (Millipore AB1952); β3 integrin (abcam ab119992); α5 (abcam ab72663); α5 β3 (abcam ab78289).
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8

Integrin and Neuropilin-1 Expression Analysis

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To examine the integrin receptors and neuropilin-1 (NRP-1) expression, we collected cells (B16F10, C6, 4T1, Hela and A549) and obtained cellular proteins using T-PER Tissue Protein Extraction Reagent (Thermo Pierce). The total protein concentration was then quantified by a BCA protein assay kit (P0010, Beyotime Company). Western blot tests were processed in the standard fashion, and analyzed quantitatively protein expressions by the ImageJ software. The following antibodies were used in the procedure: integrin αv (ab179475, Abcam), integrin β3 (ab119992, Abcam), NRP-1 (ab81321, Abcam), integrin β5 (ab184312, Abcam), GAPDH (ab181602, Abcam), and goat anti-rabbit IgG (H+L) secondary antibody (31,210, Thermo Pierce).
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9

Protein Extraction and Western Blot Analysis

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A protein extraction kit (Ding Guo, China) was used to extract total cell protein. The extracted proteins from platelets, Pex and PexD were boiled for 5 min and separated by SDS-PAGE. Coomassie blue staining was used to visualize proteins. Proteins were prepared for western blotting as previously stated. Following gel electrophoresis, proteins were transferred to polyvinylidene fluoride membranes (Bio-Rad). After 2 h of blocking in 5% skim milk, the membranes were incubated with anti-TSG101 (Abcam, ab125011), anti-CD9 (Abcam, ab92726), anti-CD63 (Abcam, ab217345), anti-CD61 (Abcam, ab119992), anti-CD41 (Abcam, ab63983) or anti-P-selectin (Abcam, ab6632). The antibodies were added at a dilution of 1:1000 and incubated at 4 °C overnight, and the blots were then incubated with 5% skim milk for 2 h. Then, the membranes and an appropriate secondary antibody (1:10,000) were incubated at room temperature for 1 h.
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10

Exosome Protein Extraction and Characterization

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A protein extraction kit (Ding Guo, China) was used to extract total cell protein. The extracted proteins from platelets, Pex and PexD were boiled for 5 min and separated by SDS-PAGE. Coomassie blue staining was used to visualize proteins. Proteins were prepared for western blotting as previously stated. Following gel electrophoresis, proteins were transferred to polyvinylidene fluoride membranes (Bio-Rad). After 2 h of blocking in 5% skim milk, the membranes were incubated with anti-TSG101 (Abcam, ab125011), anti-CD9 (Abcam, ab92726), anti-CD81 (Abcam, ab79559), anti-CD61 (Abcam, ab119992), anti-CD41 (Abcam, ab63983) or anti-P-selectin (Abcam, ab6632).
The antibodies were added at a dilution of 1:1000 and incubated at 4 °C overnight, and the blots were then incubated with 5% skim milk for 2 h. Then, the membranes and an appropriate secondary antibody (1:10000) were incubated at room temperature for 1 h.
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