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16 protocols using glow discharged holey carbon grid

1

Cryo-EM Examination of Vesicle Structures

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We performed cryo-electron microscopy (cryo-EM) to examine the presence of vesicle structures in selected, pooled column eluates. Around 5 µl of the specimen was directly adsorbed onto glow-discharged holey carbon grids (QUANTIFOIL, Germany). Grids were blotted at 95% humidity and rapidly plunged into liquid ethane with the aid of VITROBOT (Maastricht Instruments BV, The Netherlands). Vitrified samples were imaged at liquid nitrogen temperature using a JEM-2200FS/CR transmission cryo-electron microscope (JEOL, Japan), equipped with a field emission gun and operated at an acceleration voltage of 200 kV.
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Negative Staining and Cryo-EM of Extracellular Vesicles

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For negative staining, vesicles were adsorbed onto glow-discharged Formvar-Carbon Niquel grids, washed with distilled water and stained with freshly prepared 2% uranyl acetate in aqueous suspension. Negative stained samples were imaged at room temperature using a JEM-1230 transmission electron microscope (JEOL) equipped with a thermionic tungsten filament and operated at an acceleration voltage of 120 kV. Images were taken using the ORIUS SC1000 (4008 × 2672 pixels) cooled slow-scan CCD camera (GATAN). For cryo-electron microscopy, EV preparations were directly adsorbed onto glow-discharged holey carbon grids (QUANTIFOIL, Germany). Grids were blotted at 95% humidity and rapidly plunged into liquid ethane with the aid of a VITROBOT (Maastricht Instruments BV, The Netherlands). Vitrified samples were imaged at liquid nitrogen temperature using a JEM-2200FS/CR transmission cryo-electron microscope (JEOL, Japan) equipped with a field emission gun and operated at an acceleration voltage of 200 kV.
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Cryo-EM and Negative Staining Imaging

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Negative-staining was achieved by adsorbing ~5 μL of sample on a glow-discharged formvar/carbon coated copper grid (Electron Microscopy Sciences) and staining with 2% uranyl formate. Imaging was performed on a JEOL JEM-1400 Plus microscope operated at 80kV. Samples for cryo-EM were first concentrated using centrifugal filters with 30-kD nominal molecular weight limit (EMD Millipore) to remove iodixanol and achieve ~50 nM DNA-ring concentration. The concentrated samples were then adsorbed on glow-discharged holey carbon grids (Quantifoil MicroTools GmbH), which were subsequently washed with buffer solution with 10% reduced salt concentration, blotted, and flash frozen in liquid ethane using FEI Vitrobot. Imaging was performed on an FEI Tecnai-F20 microscope operated at 200kV.
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Cryo-EM Imaging of Vitrified EVs

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For cryo-electron microscopy, EV preparations were directly adsorbed onto glow-discharged holey carbon grids (QUANTIFOIL, Germany). Grids were blotted at 95% humidity and rapidly plunged into liquid ethane with the aid of a VITROBOT (Maastricht Instruments BV, The Netherlands). Vitrified samples were imaged at liquid nitrogen temperature using a JEM-2200FS/CR transmission cryo-electron microscope (JEOL, Japan) equipped with a field emission gun and operated at an acceleration voltage of 200 kV.
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5

Cryo-EM Imaging of Extracellular Vesicles

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The cryo-electron microscopy (EM) was performed following the protocol used by Perez and colleagues (29 (link)). Briefly, 10 μl of EV preparations were directly adsorbed onto glow-discharged holey carbon grids (QUANTIFOIL Micro Tools GmbH). Grids were blotted at 95% of humidity and rapidly plunged into liquid ethane with the aid of VITROBOT (Maastricht Instruments B). Vitrified samples were imaged at liquid nitrogen temperature using a JEM-2200FS/CR transmission cryo-electron microscope (JEOL) equipped with a field emission gun and operated at an acceleration voltage of 200 kV.
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6

Cryo-EM and Immuno-EM of Niosomes

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For cryo-EM, niosome samples were directly adsorbed onto glow-discharged holey carbon grids (QUANTIFOIL). For vitrification, grids were blotted at 95% humidity and rapidly plunged into liquid ethane with VITROBOT (Maastricht Instruments BV).
For immuno-EM, samples were fixed in 2% paraformaldehyde in PBS and deposited onto Formvar/carbon-coated EM grids, previously pre-coated with Poly-L-lysine (MW of 15,000–30,000 kDa, Sigma Aldrich) as described before [19]. The niosome-coated grids were washed with PBS and finally blocked with PBS/1% BSA for 15 min. Blocked grids were transferred to a drop of PBS/0.1% BSA containing primary antibody and incubated ON at 4°C in a humidified chamber. The grids were washed on a drop of PBS, transferred to a drop of PBS/0.1% BSA containing secondary antibodies conjugated to 15 nm gold-particles (Aurion) and incubated for 2 h at RT in a humidified chamber. Grids were washed with dH2O and fixed with 1% glutaraldehyde, washed with H2O and stained with 2% uranyl acetate for 1 min at RT. Afterwards, samples were vitrified as described above and visualised using a JEM-2200FS Field Emission TEM equipped with a digital camera (JEOL).
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7

Negative Staining and Cryo-EM Imaging of Extracellular Vesicles

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For negative staining, vesicles were adsorbed onto glow-discharged Formvar-Carbon Niquel grids, washed with distilled water and stained with freshly prepared 2% uranyl acetate in aqueous suspension. Negative stained samples were imaged at room temperature using a JEM-1230 transmission electron microscope (JEOL) equipped with a thermionic tungsten filament and operated at an acceleration voltage of 120 kV. Images were taken using the ORIUS SC1000 (4008 × 2672 pixels) cooled slow-scan CCD camera (GATAN). For cryo-electron microscopy, EV preparations were directly adsorbed onto glow-discharged holey carbon grids (QUANTIFOIL, Germany). Grids were blotted at 95% humidity and rapidly plunged into liquid ethane with the aid of a VITROBOT (Maastricht Instruments BV, The Netherlands). Vitrified samples were imaged at liquid nitrogen temperature using a JEM-2200FS/CR transmission cryo-electron microscope (JEOL, Japan) equipped with a field emission gun and operated at an acceleration voltage of 200 kV.
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8

Cryo-EM Imaging of Extracellular Vesicles

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EVs were directly adsorbed onto glow‐discharged holey carbon grids (QUANTIFOIL, Germany) and processed as described.21 Images were obtained in a JEM‐2200FS/CR transmission cryo‐electron microscope (JEOL, Japan).
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9

Cryo-EM and Negative Staining Imaging

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Negative-staining was achieved by adsorbing ~5 μL of sample on a glow-discharged formvar/carbon coated copper grid (Electron Microscopy Sciences) and staining with 2% uranyl formate. Imaging was performed on a JEOL JEM-1400 Plus microscope operated at 80kV. Samples for cryo-EM were first concentrated using centrifugal filters with 30-kD nominal molecular weight limit (EMD Millipore) to remove iodixanol and achieve ~50 nM DNA-ring concentration. The concentrated samples were then adsorbed on glow-discharged holey carbon grids (Quantifoil MicroTools GmbH), which were subsequently washed with buffer solution with 10% reduced salt concentration, blotted, and flash frozen in liquid ethane using FEI Vitrobot. Imaging was performed on an FEI Tecnai-F20 microscope operated at 200kV.
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10

Vitrifying Nanoparticles for Cryo-TEM Imaging

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Nanoparticle preparations were plunge-frozen onto glow discharged holey carbon grids (Quantifoil Micro Tools, Jena, Germany) in liquid ethane using the environment-controlled Vitrobot (Vitrobot MarkIV, FEI, Eindhoven, The Netherlands). Briefly, 3 μl of the nanoparticle solution were applied onto the grid which was held by tweezers inside the climate chamber (22°C, 100% relative humidity) of the Vitrobot. The solution was automatically blotted with filter paper leaving a thin film of the nanoparticle solution over the holes. The film was allowed to relax for 10 s prior to plunge freezing the sample on the grid in liquid ethane cooled near to its freezing point. Vitrified nanoparticle samples were imaged at −170°C using a Gatan cryo-transfer holder (Gatan 626, Gatan Inc. Pleasanton, USA) and standard low-dose imaging conditions (1 e2.s)64 (link) at a Tecnai G2 F20 transmission electron microscope (FEI, Oregon, USA), operated at 200 kV. Images were acquired at × 25,000 magnification on a 2k × 2k CCD camera (894 Ultrascan 1000, Gatan Inc., Pleasanton, USA).
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