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5 protocols using renoir red

1

Immunohistochemical Staining of CD147 and E-cadherin

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Samples were processed and stained by immunohistochemistry (IHC) as previously described [16 (link), 17 (link)]. Tissues were stained using mouse monoclonal anti-CD147 (Meridian Life Science, Memphis, TN; 1:75 in Renoir Red [Biocare, Concord, CA]), mouse monoclonal anti-E-caderin (Dako, Carpinteria, CA; 1:200 in Biocare Renoir Red), and Mach 2 Mouse HRP-Polymer (Biocare) as a secondary antibody. Bajoran Purple chromogen (Biocare) was used to detect CD147 and Deep Space Black (Biocare) was used to detect E-caderin.
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2

Quantifying NGF Expression in Colonic Tissue

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Frozen sections of colon tissue from control, CAS, CPS and CPS + CAS female rats were mounted on glass slides, and rehydrated in phosphate buffered saline at room temperature. The slides were treated for antigen retrieval and blocked with 10% normal goat serum diluted in 0.3% phosphate buffered saline-Triton for 1 h, and then incubated with NGF primary antibody in antibody diluent (Renoir Red, Biocare Medical, Concord, CA) at 4 °C overnight. The slides were exposed to fluorescent dye-conjugated secondary antibody for 2 h at room temperature, counterstained with 4',6-diamidino-2-phenylindole and coverslipped. Images were taken in fluorescence mode on an Olympus laser scanning confocal microscope and the average signal intensity was calculated by the bundled software.
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3

Osteopontin Immunohistochemistry in Tissue Sections

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The sections were deplastified with a xylene/chloroform mixture and with 2-methoxyethyl-acetat, rehydrated, pre-treated in EDTA [0.5 M EDTA + 0.4% paraformaldehyde (pH 8.0)], and blocked with 0.5% casein (Sigma-Aldrich, Copenhagen, Denmark) in TBS [0.05 M Tris-HCl (pH 7.6)+0.15
M NaCl] and a avidin/biotin blocking kit (DAKO, Glostrup, DK). The sections were then incubated with biotinylated goat anti-osteopontin antibodies (BAF1433, R&D systems, Minneapolis, MN, US) diluted in Renoir Red (PD904, Biocare Medical, Concord, CA, US), which were detected with alkaline phosphatase conjugated streptavidin (016-050-084, Jackson ImmunoResearch, Suffolk, UK) and visualized with Liquid Permanent Red (DAKO, Glostrup, DK). Finally, the sections were counter-stained with Mayer's hematoxylin and mounted with Aquatex.
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4

Dual Immunolabeling of PAX5 and CD20

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Double-immuno-labelling experiments were performed on 3-µmthick FFPE sections, using anti-human PAX5 clone DAK-Pax5 (Agilent/Dako, cat. no. M7307, Glostrup, Denmark) and CD20 clone L26 (Agilent/Dako, cat. no. M0755). All incubation steps were performed automatically on the Omnis (Agilent/Dako). Briefly, FFPE sections were exposed to deparaffinization, followed by antigen retrieval using EnVision™ FLEX Target Retrieval solution (3-in-1) pH 9 (Agilent/Dako, cat. no. GV800/821) at 97°C (24 min). In the first sequence, slides were incubated with PAX5 diluted 1:30 in Renoir Red (Biocare Medical, cat. no. PD904, Pacheco, CA, USA) for 30 min (32°C), and reactions were visualized with EnVision™ FLEX /HRP/DAB Detection Reagent (Dako, cat. no. GV800/GV821). After visualization with DAB, slides were incubated with CD20, diluted 1:500 in Envision Flex Antibody Diluent (Agilent/Dako, cat. no. K8006) for 30 min (32°C), reactions were detected with EnVision™ FLEX/HRP Reagent (Dako, cat. no. GV800/GV821) and visualized using Magenta Substrate chromogen system (Agilent/Dako, cat. no. GV925). All slides were counterstained with haematoxylin and mounted with Pertex.
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5

Simultaneous Double-Immunofluorescence Staining

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Double-immunofluorescence (dIF) studies (simultaneous technique) were performed on representative cases (5 ES-MF and 2 AS-MF) to investigate whether the neoplastic T-cells and the subpopulation PAX5/CD20+ cells were malignant T-cells displaying an aberrant CD20 expression. The dIF staining was performed as described in detail elsewhere (26 (link)). In brief, after deparaffinization and antigen retrieval, as described above, the slides were incubated for 30 min (32°C) with a mixture of anti-human CD3 clone EP41 (Cell Marque, cat. no. AC-0004, Rocklin, CA, USA) and anti-human CD20 clone L26 (Agilent/Dako, cat. no. M0755) diluted in Renoir Red (Biocare, cat. no. PD904) 1:20 and 1:250, respectively. Slides were incubated with a mix of goat anti-rabbit conjugated with Alexa Fluor 594 (Fisher Scientific, cat. no. 11012, Roskilde, Denmark) and goat anti-mouse conjugated with Alexa Fluor 488 (Fisher Scientific, cat. no. 11001), both diluted 1:200 in Envision Flex Antibody Diluent (Agilent/Dako, cat. no. K8006), for 30 min (32°C). After washing, the slides were air-dried and mounted with Vectashield with DAPI (Vector Labs, cat. no. H1200, Burlingame, CA, USA). Slides were evaluated with a Nikon Eclipse 80 fluorescence microscope with standard sets of filters for each fluorochrome.
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