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Anti vimentin rabbit monoclonal antibody

Manufactured by Cell Signaling Technology
Sourced in United States

The Anti-vimentin rabbit monoclonal antibody is a laboratory research tool used to detect and analyze vimentin, an intermediate filament protein expressed in various cell types. It provides a specific and sensitive means to identify and study vimentin in biological samples.

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8 protocols using anti vimentin rabbit monoclonal antibody

1

Western Blot Analysis of Cellular Signaling

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Cells were lysed with Nonidet P-40 (NP-40) lysis buffer (50 mM Tris–HCl [pH 8.0], 150 mM NaCl, 1% NP-40) containing protease inhibitor cocktail. Proteins were separated on sodium dodecyl sulfate‑polyacrylamide gel electrophoresis gels and were electroblotted onto polyvinylidene fluoride membrane (GE Healthcare Bio-sciences, Piscataway, NJ). The polyvinylidene fluoride membranes were incubated with anti-phospho-Smad2 antibody (Ser465/467), anti-phospho-extracellular-signal-regulated kinases (ERK) 1/2 monoclonal antibody (Thr202/Tyr204), anti-total-Smad2 mouse monoclonal antibody, anti-total-ERK1/2 rabbit monoclonal antibody, anti-E-cadherin rabbit monoclonal antibody, anti-vimentin rabbit monoclonal antibody, anti-N-cadherin rabbit monoclonal antibody (Cell Signaling, Danvers, MA), anti-α-SMA rabbit polyclonal antibody, anti-collagen I rabbit polyclonal antibody (Abcam), or anti-fibronectin mouse monoclonal antibody (BD Biosciences). The HRP‑conjugated goat anti-rabbit or anti-mouse IgG (GE Healthcare Bio-sciences) served as the secondary antibodies. The immunolabeled proteins were visualized by enhanced chemiluminescence. The band intensity was analyzed densitometrically by using ImageJ software (NIH).
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2

Western Blotting Protocol for Protein Analysis

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Western blotting (WB) was performed as previously described [11 (link)]. The primary antibodies employed were anti-DAB2 rabbit monoclonal antibody (dilution 1/500), anti-E-cadherin mouse monoclonal antibody (cat no. 3195; dilution 1/500, Cell Signaling Technology, Danvers, MA, USA), anti-N-cadherin mouse monoclonal antibody (cat no. 33-3900; dilution 1/500, Thermo Fisher Scientific), anti-vimentin rabbit monoclonal antibody (cat no. 5741; dilution 1/500, Cell Signaling Technology), anti-phospho-AKT rabbit monoclonal antibody (cat no. 4060; dilution 1/1000, Cell Signaling Technology), anti-phospho-ERK1/2 rabbit monoclonal antibody (cat no. 9101; dilution 1/1000, Cell Signaling Technology). Anti-actin mouse monoclonal antibody (clone AC-15; dilution 1/10,000, Sigma-Aldrich, Tokyo, Japan) was used as an inner loading control. Secondary antibody, horseradish peroxidase-conjugated goat anti-rabbit IgG (dilution 1/5000) or anti-mouse IgG antibody (dilution 1/10,000) (Santa Cruz Biotechnology), was incubated at 37 °C for 1 h.
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3

Antibody Profiling for Cell Characterization

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Anti‐human apoA‐I rabbit polyclonal antibody was obtained from ProteinTech. Anti‐human mast cell tryptase mouse monoclonal antibody was obtained from Chemicon International Inc. Anti‐human mast cell chymase (CC1) mouse monoclonal antibody and anti‐human β‐actin antibody were obtained from Abcam. Anti‐E‐cadherin rabbit monoclonal antibody, anti‐N‐cadherin rabbit monoclonal antibody, and anti‐vimentin rabbit monoclonal antibody were purchased from Cell Signaling Technology. Secondary biotin‐conjugated goat anti‐rabbit IgG antibody and goat anti‐mouse IgG antibody were obtained from Vector Laboratories.
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4

Immunofluorescence Staining of E-cadherin and Vimentin

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PC9 cells were fixed in 4 wt% paraformaldehyde (Sigma, St Louis, MO, USA) for 30 min and rinsed three times with PBS for 10 min each time. The samples were immersed in 0.2% Triton X-100 for 10 min, rinsed three times for 10 min each time with PBS, and then blocked in 4% goat serum for 1 h at room temperature. Then sample sections were incubated overnight in anti-E-cadherin rabbit monoclonal antibody (1:200, Cell Signaling Technology) and anti-vimentin rabbit monoclonal antibody (1:200, Cell Signaling Technology) at 4°C. After rinsed with PBS three times, the samples were subsequently incubated in anti-rabbit immunoglobulin G secondary antibody conjugated with fluorescein isothiocyanate (FITC) or APC (1:100, eBioscience) for 1 h in the dark. For nuclei observation, the samples were dipped in 4,6-diamidino-2-phenylindole dihydrochloride (DAPI) solution (Sigma, 3 μg/mL) and immediately rinsed with PBS. In the stained image, the E-cadherin displayed red fluorescence, the vimentin displayed green florescence, and the nuclei displayed blue fluorescence.
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5

Immunohistochemical Analysis of Tumor Markers

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Immunohistochemistry analyses were performed on 5-μm, formalin-fixed, paraffin-embedded slides from tumors arising in the mutant mice. The following antibodies were used: rabbit polyclonal anti-E-cadherin antibody (1:200; Cell Signaling, #3195, Danvers, MA), rabbit polyclonal anti-Ki-67 antibody (1:200; Abcam, ab15580, Cambridge, UK), mouse monoclonal anti-β-catenin antibody (1:200; BD Transduction Laboratories, 610154, San Diego, CA), rabbit monoclonal anti-vimentin antibody (1:100; Cell Signaling, #5741), and rabbit monoclonal anti-MMP7 antibody (1:100; Cell Signaling, #3801). The invasive front of the tumor was defined as the microscopic interface between normal tissue of the host mouse and the tumor mass invading the submucosa or deeper regions of the stomach [20 (link)]. Differences in the percentage of positive immunostaining between the various genotypes were evaluated using the Student t-test.
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6

Western Blot Analysis of 2D and 3D Cancer Cells

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Cancer cells cultured as 2D monolayers were harvested using trypsin–EDTA and the cells pelleted using standard tissue culture techniques. Cells cultured as 3D tumouroids in 24-well plates were pre-treated with 200 units/mL collagenase I (Gibco, UK) in HBSS buffer (450 µL per well) for 60 min on a plate shaker at 37 °C, centrifuged at 1,700×g for 5 min and the cell pellet collected. SDS PAGE and western blotting was performed using the cell pellets as described previously 18. The resulting blots were incubated with rabbit monoclonal anti-vimentin antibody (Cell Signalling Technology, USA) at 1:100 and rabbit monoclonal anti-ErbB 2 antibody (ab134182, Abcam, UK) at 1:1,000. Rabbit polyclonal anti-GAPDH antibody (Abcam, UK) was used as loading control on the same blot at 1:5,000 for 90 min. Goat polyclonal anti-rabbit IgG (HRP) pre-adsorbed (Abcam, UK) was used as secondary antibody at 1:5,000 for 60 min. The resulting blot was visualised using enhanced chemiluminescence (ECL) detection system (Thermofisher, USA) by adding a mixture of equal parts of peroxide solution and the luminol/enhancer solution on the blot and incubate it for 5 min. The images were captured using a Biospectrum UVP imaging system following 20 and 60 s exposure times.
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7

Immunohistochemical Analysis of EMT and CSC Markers

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Formalin-fixed, paraffin-embedded tumor tissue was cut into 4-μm thick sections and immunohistochemistry was performed using a protocol previously reported by our group but with some modifications[15 (link)]. The most representative section of tumor for each case was selected for analysis. We analyzed not only DCLK1 expression, but also the expression of E-cadherin, N-cadherin, vimentin, and Snail as EMT markers, and CD24, CD44, CD133, and epithelial cell adhesion molecule (EpCAM) as CSC markers. The primary antibodies used for immunohistochemistry were: rabbit polyclonal anti-DCLK1 antibody (1:80 dilution; Abcam, Cambridge, MA, United States); rabbit polyclonal anti-Snail antibody (1:80 dilution; Abcam); mouse monoclonal anti-E-cadherin antibody (1:50 dilution; Dako Co., Carpinteria, CA, United States); rabbit monoclonal anti-vimentin antibody (1:100 dilution; Cell Signaling, Danvers, MA, United States); rabbit polyclonal anti-N-cadherin antibody (1:100 dilution; Abcam); goat polyclonal anti-CD24 antibody (1:20 dilution; Santa Cruz Biotechnology, Dallas, TX, United States); mouse monoclonal anti-CD44 antibody (1:50 dilution; Dako Co); mouse monoclonal anti-CD133 antibody (1:10 dilution; Miltenyi Biotec, Gladbach, Germany); and mouse monoclonal anti-EpCAM antibody (1:500 dilution; Cell Signaling).
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8

Histological Analysis of Tumor Implants

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At the endpoint of the study (day 6, 24, or 31) or upon the development of abnormal phenotypes, mice implanted with RSV-M or U87MG cells were euthanized by terminal anesthesia, and perfusion fixation was performed with 4% paraformaldehyde. Perfusion-fixed brain tissue was processed for paraffin embedding or frozen, sectioned, and stained with H & E. For immunohistochemistry, 5-µm sections were prepared and examined for CD146, vimentin, and Ki-67 expression. Proteins were stained with rabbit monoclonal anti-CD146 antibody (1:200; Abcam), rabbit monoclonal anti-vimentin antibody (1:100; Cell Signaling Technology Inc.), and rabbit monoclonal anti-Ki-67 antibody (1:200; Novus Bio). Slides were scanned microscopically using a Biorevo BZ-9000 and BZ-X800 (Keyence), and three representative fields were photographed (magnification ×400). Ki-67-positive cells were counted using software (BZ-II dynamic cell count) embedded within the BZ-9000 system.
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