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Faststart universal sybr green master rox system

Manufactured by Roche

The FastStart Universal SYBR Green Master (Rox) system is a laboratory equipment product offered by Roche. It is a ready-to-use reagent mix designed for real-time quantitative PCR (qPCR) applications using the SYBR Green detection method and the ROX passive reference dye.

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2 protocols using faststart universal sybr green master rox system

1

Quantitative gene expression analysis

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Total RNA was purified from cells using the RNeasy Universal Mini Kit (Qiagen) following manufacturer’s specifications. Purified RNA was then transcribed to cDNA using the SuperScript III Reverse Transcriptase system (Thermo Fisher Scientific), and subjected to qPCR reactions using the FastStart Universal SYBR Green Master (Rox) system (Roche) with primers targeting mouse GAPDH, IL-6, MIP-1α and Arg1. Primer sequences are as follows:
TREM2,forward 5’-AGGGCCCATGCCAGCGTGTGGT-3’,
Reverse 5’-CCAGAGATCTCCAGCATC-3’;
GAPDH,forward 5’-CCCTTCATTGACCTCAACTA-3’,
reverse 5’-CCTTCTCCATGGTGGTGAA-3’;
IL-6,forward 5′-TAGTCCTTCCTACCCCAATTTCC-3′,
reverse 5′-TTGGTCCTTAGCCACTCCTTC-3′.
MIP-1α,forward 5′-CCCAGCCAGGTGTCATTTTCC-3′,
reverse 5′-GCATTCAGTTCCAGGTCAGTG-3′;
Arg1,forward 5′-CACAGTCTGGCAGTTGGAAGC-3′,
reverse 5′-CTTTGGCAGATATGCAGGGAG-3′.
These experiments were repeated 3 times. Randomization procedures are not applicable to this assay. Data were collected and analyzed in a double-blind fashion. No statistical methods were used for sample size estimation. No data were excluded.
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2

Quantifying Gene Expression via RT-qPCR

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Total RNA was extracted using the TRIzol reagent (Thermo Fisher Scientific), and first-strand complementary (c)DNA was synthesized using a Revert Aid First Strand cDNA Synthesis Kit (Thermo Fisher Scientific). Quantitative real-time PCR was conducted using a FastStart Universal SYBR Green Master (Rox) system (Hoffman-La Roche Ltd.). SYBR green real-time PCR mix was used with 7.5 μM each of forward and reverse primers, which are listed in Table 1, for PCR. The reaction conditions were as follows: predenaturation at 95°C for 10 minutes; 40 cycles of 95°C for 15 seconds; 60°C for 60 seconds; 72°C for 20 seconds; and a final extension at 60°C for 5 minutes. GAPDH was used as the reference gene. Relative quantification of gene expression for both target and reference genes was performed by the 2−ΔΔCt method and based on Ct values. Real-time PCR analysis results are presented as the mean ± standard deviation (SD) of fold-change in expression.
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