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Gentamicin amphotericin

Manufactured by Thermo Fisher Scientific
Sourced in Germany, United States

Gentamicin/amphotericin is a combination of two antimicrobial agents commonly used in cell culture media. Gentamicin is an antibiotic effective against a broad spectrum of bacteria, while amphotericin is an antifungal agent. This product provides simultaneous protection against both bacterial and fungal contamination in cell culture applications.

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27 protocols using gentamicin amphotericin

1

Culturing Human Endothelial Cells

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Human pulmonary artery endothelial cells (HPAECs) were purchased from PromoCell (Switzerland). HPAECs were cultured in T25 flasks, 6‐well plates or on glass coverslips coated with attachment factor (Gibco), and allowed to grow and reach confluence in endothelial cell growth medium 2 (PromoCell, Switzerland) containing endothelial cell growth medium supplement 2 (PromoCell, Switzerland) and Gentamicin/amphotericin (Gibco).
Human umbilical vein endothelial cells (HUVECs) were purchased from Gibco. HUVECs were cultured in T25 flasks, 6‐well plates or on glass coverslips coated with attachment factor (Gibco), and allowed to grow and reach confluence in medium 200 containing low serum growth supplement and Gentamicin/amphotericin (Gibco).
Cells from passage 3 to 6 were used for all experiments.
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2

Isolation and Propagation of TBEV in A549 Cells

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The TBEV strain Haselmühl 303/16, was isolated in 2016 from an I. ricinus tick pool. A549 cells (ATCC CCL-185) were grown in MEM (Thermo Scientific, Waltham, MA, USA) containing 10% foetal bovine serum (FBS) and antibiotics (penicillin/streptomycin, Pan Biotech; Aidenbach, Germany; gentamicin/amphotericin, Thermo Fisher, Waltham, MA, USA) and maintained at 37 °C under 5% CO2 until use. Cells were inoculated with 100 µL aliquots of TBEV-RNA positive tick homogenate provided form the laboratory of the Bundeswehr Institute of Microbiology in Munich, diluted 1:10 in MEM and incubated for 1 h at 37 °C and 5% CO2. Unabsorbed virus and potential toxic substances from the tick supernatants were removed by rinsing cells three times with sterile PBS. The infected cells were overlaid with 10 mL of MEM supplemented with 2% FBS and antibiotics (penicillin/streptomycin, Pan Biotech; Aidenbach, Germany; gentamicin/amphotericin Thermo Fisher, Waltham, MA, USA). The virus stock titre was determined by 50% endpoint dilution according to Reed & Muench56 (link) and aliquots were stored at − 150 °C. For infection of ticks, the first passage of virus was used.
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3

Osteoblast Isolation and Differentiation

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Osteoblasts were cultured from neonatal α9KO (n = 10) and α9WT (n = 7) C57BL/6J mice at day 1–4 according to the protocol of [27 (link),28 (link)]. The neonatals were a kind gift of Dr. Claudia Dames (Institute of Medical Immunology, Charite - Universitätsmedizin Berlin, Germany). In brief, calvaria and long bones were incubated in 1 mg/mL collagenase (Capricorn Scientific, Ebsdorfergrund, Germany) and 4 mM ethylene diamine tetra acetic acid (EDTA) at 37 °C and centrifuged for 5 min at 1.500 g at 4 °C. Isolates were seeded in 24 well plates for 4 d at 37 °C and 5% CO2 and passaged with 0.005% trypsin (Gibco, Life Technologies, Carlsbad, USA). Cells of passage 2 (13.441 cells/cm2) were used for osteogenic differentiation in α-minimum essential medium (MEM, Gibco) containing 10% fetal bovine serum (FBS, PAN Biotech, Aidenbach, Germany), 10−7M dexamethasone (Sigma, St. Louis, MO, USA), 50 pg/mL sodium L-ascorbate (Sigma), 2 × 10−3 M β-glycero phosphate hydrate (Sigma), and gentamicin/amphotericin (Gibco) for 7 d. Then, mineralization was determined using the Senso- Lyte pNPP alkaline phosphatase assay (AnaSpec, Fermont, CA, USA) and collagen deposition was analyzed by a Picro-Sirius-Red assay (Abcam, Cambridge, UK). Subsequent histomorphometry calculated the area of positive collagen type 1 and 3 staining.
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4

Optimized Cell Culture Media for Urinary Epithelial Cells

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High-glucose DMEM supplemented with 10% FBS (Gibco), MEM non-essential amino acids, 100 mM sodium pyruvate and 100 U/mL penicillin-streptomycin was used as “Standard Medium”. CnT-Prime was purchased from CELLnTEC. “Uromedium” was prepared according to Osborn et al.6 (link) with slight modifications. Briefly, “Uromedium” was comprised of EpiLife medium with 60 µM calcium (Gibco; MEPI500CA) supplemented with 60 μg/mL bovine pituitary extract (Gibco), 5 μg/mL human recombinant insulin (Diagnocine), 500 ng/mL hydrocortisone (Tokyo Chemical Industry), gentamicin/amphotericin (Gibco), 2% FBS, 0.1 ng/mL human recombinant epidermal growth factor (EGF) (RSD) and 100 μM 3-Isobutyl 1-methylxanthine (IBMX) (Sigma-Aldrich). “UCM” was comprised of EpiLife medium with 60 µM calcium supplemented with 60 μg/mL bovine pituitary extract, 5 μg/mL human recombinant insulin, gentamycin/amphotericin, 2% FBS, 0.01 ng/mL human recombinant EGF, 1 mM IBMX and 1 μM tranylcypromine (Abcam).
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5

Osteoblast Isolation and Differentiation

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Osteoblasts were cultured from neonatal α9KO (n = 10) and α9WT (n = 7) C57BL/6J mice at day 1–4 according to the protocol of [27 (link),28 (link)]. The neonatals were a kind gift of Dr. Claudia Dames (Institute of Medical Immunology, Charite - Universitätsmedizin Berlin, Germany). In brief, calvaria and long bones were incubated in 1 mg/mL collagenase (Capricorn Scientific, Ebsdorfergrund, Germany) and 4 mM ethylene diamine tetra acetic acid (EDTA) at 37 °C and centrifuged for 5 min at 1.500 g at 4 °C. Isolates were seeded in 24 well plates for 4 d at 37 °C and 5% CO2 and passaged with 0.005% trypsin (Gibco, Life Technologies, Carlsbad, USA). Cells of passage 2 (13.441 cells/cm2) were used for osteogenic differentiation in α-minimum essential medium (MEM, Gibco) containing 10% fetal bovine serum (FBS, PAN Biotech, Aidenbach, Germany), 10−7M dexamethasone (Sigma, St. Louis, MO, USA), 50 pg/mL sodium L-ascorbate (Sigma), 2 × 10−3 M β-glycero phosphate hydrate (Sigma), and gentamicin/amphotericin (Gibco) for 7 d. Then, mineralization was determined using the Senso- Lyte pNPP alkaline phosphatase assay (AnaSpec, Fermont, CA, USA) and collagen deposition was analyzed by a Picro-Sirius-Red assay (Abcam, Cambridge, UK). Subsequent histomorphometry calculated the area of positive collagen type 1 and 3 staining.
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6

Isolation of Primary Mouse Astrocyte Progenitors

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These experiments were carried out according to the European Regulations for Animal Care under the approval of the university/regional government research ethics committees. Whole brains of newborn (PND1-3) C57BL/6 (Charles River Laboratories; RRID:IMSR_CRL:027) mice were collected in cold DMEM/F12 medium with l-glutamine (Lonza, #BE12-719F). Mechanical dissociation was done by gentle scraping over a 40 μm mesh. The cell suspension was centrifuged, and the cell pellet was resuspended with 4 mL in growth medium DMEM/F12 with l-glutamine; 1% Gentamicin/Amphotericin (GIBCO, #R01510) and 10% FBS. Cells were plated on uncoated T25 flasks. After 5 days of incubation (37 °C, 5% CO2), fresh growth medium was added and incubated for 48 h. Then, the flasks were placed at 300 rpm in a shaker at room temperature for 12 h, then 1 h at 37 °C (5% CO2), and finally for an additional 12 h in the shaker at room temperature to remove oligodendrocytes and microglial cells from culture and obtain isolated primary mouse astrocyte progenitor cell cultures. After shaking, the medium was replaced with growth medium.
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7

3D Spinal Cord Neuron Culture

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Isolated SpC were cut in three sections (apical, central, and caudal; ~1 × 1 × 2 mm) and cultured within 5 μL drop of 100% Matrigel Growth Factor Reduced (Corning 354 230) casted onto glass coverslip. For oSpC 3D culture onto decell muscles, scaffolds were cut in ~1 × 2 × 4 mm sections and put on a glass coverslip; then a single oSpC section was added onto each scaffold section and covered by 10 μL Matrigel droplet. To evaluate neural attractant effects of decell muscles, SpC sections were placed side by side with scaffold or with a sterile hydrophilic cotton gauze (~1 × 1 × 2 mm) onto a glass coverslip; 15 μL Matrigel droplet was used to embed the samples. The inert and decell scaffolds were placed approximately the same distance from each other (~1.5 mm) using a millimeter grid that was located under the petri dish at the moment of seeding. Samples were cultured in Neurobasal medium (Gibco 21 103 049), B‐27 supplement (Gibco 17 504 044) 1X, 2% Horse serum (Gibco 16 050 122), 0.5 mM GlutaMAX Supplement (Gibco 35 050 038), 25 μM 2‐Mercaptoethanol (Gibco 31 350 010), 25 μM L‐Glutamic acid (Sigma G5889), Gentamicin/Amphotericin (Gibco R01510), 10 ng/mL ciliary neurotrophic factor (CNTF, PeproTech 450‐13), and 10 ng/mL glial‐cell‐line‐derived neurotrophic factor (GDNF, Peprotech 450‐10). oSpC sections were maintained in culture for 14 days. Half medium was changed every 4 days.
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8

Cell Culture Conditions for Diverse Cell Lines

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HeLa, 293T, SiHa and C33A cells were cultured in Dulbecco's modified Eagle’s medium (DMEM; Cytiva, previously Hyclone) supplemented with 10% bovine calf serum (BCS; Hyclone) and 1% penicillin–streptomycin (Gibco). The normal neonatal human foreskin primary keratinocytes [nHFKs (HEKn, PCS-200–010)] were purchased from ATCC and grown in EpiLife medium (Gibco) with 1% human keratinocyte growth supplements (HKGS, Gibco) and 0.2% gentamicin/amphotericin (Gibco). This medium was also used for propagation of the immortalized human keratinocyte cell line JJM9721 established here by stable transfection of HFKs with pC97ELsL. The HeLa, SiHa and JJM9721 cell lines used here have been subjected to the Cell Line Authentication Test (Eurofins Genomics).
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9

Rat Fetal Spinal Cord Culture Protocol

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For rat fetal spinal cord cultures, E14 fetuses were obtained from pregnant Sprague Dawley rats (Charles River Laboratories, Wilmington, MA, USA). Rat fetal spinal cords were isolated following the ethical approval (D2784.N.I6Q) and culture as previously described12 (link). Briefly, isolated spinal cords were cut in three sections and cultured within 15 μL drop of 100% Matrigel (Corning) casted onto glass coverslips. Samples were cultured in Neurobasal medium (Gibco 21-103-049), B-27 supplement (Gibco 17-504-044) 1X, 2% Horse serum (Gibco 16-050-122), 0.5 mM GlutaMAX Supplement (Gibco 35-050-038), 25 μM 2-Mercaptoethanol (Gibco 31-350-010), 25 μM L-Glutamic acid (Sigma-Aldrich, G5889), Gentamicin/Amphotericin (Gibco R01510), 10 ng/mL ciliary neurotrophic factor (CNTF, PeproTech 450-13), and 10 ng/mL glial-cell-line-derived neurotrophic factor (GDNF, Peprotech 450-10).
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10

PBMC Isolation from Whole Blood

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Blood was dispensed into polypropylene tubes (BD Falcon™) and diluted 1:2 in sterile filtered phosphate-buffered saline (PBS). This solution was added to polypropylene tubes (BD Falcon™) containing Ficoll-Hypaque PLUS™ (Amersham Biosciences) (1:3). Cells were separated by centrifugation for 30 min at 900 x g 20°C, and the PBMC ring formed between the Ficoll interface and plasma was collected. Cells were washed twice by centrifugation and resuspended in DMEM medium (SIGMA™) supplemented with 10% FBS and 1% gentamicin-amphotericin (GIBCO®). Cells were counted in a Neubauer chamber using Trypan Blue dye (Sigma™).
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