The largest database of trusted experimental protocols

10 protocols using hematoxylin and eosin

1

Immunohistochemical Analysis of sFGFR2IIIc Mutant

Check if the same lab product or an alternative is used in the 5 most similar protocols
Tissues were fixed in 4% paraformaldehyde in PBS for 24 h at 4°C and were then dehydrated in a graded series of ethanol, embedded in paraffin, and sectioned at 7-µm intervals. After the sections were dewaxed and rehydrated, they were stained with hematoxylin and eosin (Wako). To detect whether sFGFR2IIIcS252W was applied, immunohistochemical staining was performed using polyclonal anti-FLAG (primary) and anti-rabbit IgG HRP-conjugated (secondary) antibodies. Immunoreactivity was subsequently visualized using a VECTASTAIN ABC Kit (Vector Laboratories, Peterborough, UK) according to the manufacturer's instructions. Sections were counterstained with Nuclear Fast Red (Vector Laboratories). BrdU incorporation was also examined as described above. For immunodetection of incorporated BrdU, cells were incubated with fluorescein isothiocyanate-conjugated anti-BrdU monoclonal antibodies for 45 min at 37°C. Cell nuclei were stained with 5 mg/mL 4′,6-diamidino-2-phenylindole (DAPI; Sigma) in PBS prior to mounting slides. Fluorescence was visualized using a fluorescence microscope (AF6000; Leica, Solms, Germany). The frequency of S-phase cells was calculated as the ratio of BrdU-positive nuclei to total DAPI-stained nuclei.
+ Open protocol
+ Expand
2

Histological Analysis of Interdigit Development

Check if the same lab product or an alternative is used in the 5 most similar protocols
For histological analysis of the interdigit, the forelimbs were harvested from adult mice and fixed with 4% paraformaldehyde in phosphate-buffered saline at 4 °C overnight. Tissues were dehydrated, embedded in paraffin, and sectioned; these sections were stained with hematoxylin and eosin (Wako). Skeleton specimens from 3-month-old adult Bhlha9-knockout and wild-type littermate control mice were stained with Alcian blue/alizarin red as previously described [18 ]. The length of the limb skeleton was measured by analysis of an image obtained with an SZX16 stereoscopic microscope (Olympus).
+ Open protocol
+ Expand
3

Histological Analysis of Mouse Skin

Check if the same lab product or an alternative is used in the 5 most similar protocols
In the Protocol 5-treated mice, dorsal skin tissue was removed before and 1–5 days after the second painting session. The excised skin specimens were fixed in 10% neutral formalin (Wako Pure Chemical Industries) or 4% paraformaldehyde (nacalai tesque) and embedded in paraffin (nacalai tesque). Sections (6 µm thick) were prepared and stained with hematoxylin and eosin (Wako Pure Chemical Industries) or toluidine blue (Sigma). toluidine blue specifically stains mast cells. The definition of lymphocyte is described in the legend of Supplementary Fig. S4.
+ Open protocol
+ Expand
4

Immunohistochemical Analysis of Tumor Angiogenesis and Macrophages

Check if the same lab product or an alternative is used in the 5 most similar protocols
Frozen tumor sections were stained with hematoxylin and eosin (Wako Pure Chemical Industries Ltd.). Collagen was stained using a Masson’s trichrome staining kit (25088-100, Polysciences, Inc.). For immunochemical staining, frozen tumor sections were fixed in 10% formalin for 10 min at room temperature. After washing with 1 × TBS, sections were incubated with 0.3% H2O2 in methanol at room temperature, followed by washing in 1 × TBS. To inhibit non-specific staining, sections were incubated in serum-free protein block solution (X0909, Dako) for 15 min at room temperature. The sections were then incubated with primary antibodies: rat anti-mouse CD31 monoclonal antibody (BD557355, BD Biosciences, 1:100) or rat anti-mouse F4/80 monoclonal antibody (MCA497, Bio-Rad, 1:100). After washing with 1 × TBS, signal stain boost IHC detection reagent (anti-rabbit, Cell Signaling Technology) or rabbit anti-rat IgG H&L (horseradish peroxidase conjugated) (ab6734, Abcam, 1:500) was added, and sections were incubated at room temperature for 30 min. After reaction with diaminobenzidine (8059S, Cell Signaling Technology), sections were counterstained with hematoxylin. A BZ-X710 microscope (Keyence, Osaka, Japan) was used for histologic observation and evaluation.
+ Open protocol
+ Expand
5

Metanephros Histology and Immunohistochemistry

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cross sections of metanephroi were stained with hematoxylin and eosin (Wako), dehydrated by ethanol, clean in xylene (Wako) and subject to microscopy (Keyence, VB-7010). Immunohistochemistry analysis was performed by following the method described previously [23] . Briefly, cross sections of samples were fixed in 10% formalin, permeabilized by 0.1% saponin (Sigma), treated with 0.1% BSA/PBS for blocking, and then applied to primary antibodies (1:200) against PECAM-1, synaptopodin (Santa Cruz Biotechnology) and αSMA (abcam), followed by secondary antibody (1:400) conjugated to Alexa Flour 488 or 568, and finally submerged in 20 μl fluoroshield mounting medium containing DAPI (abcam).
+ Open protocol
+ Expand
6

Histological Analysis of Micro-CT Scanned Skulls

Check if the same lab product or an alternative is used in the 5 most similar protocols
After imaging with micro-CT, the skulls were isolated and fixed in 4% paraformaldehyde in PBS for 24 h at 4 °C and they were then dehydrated in a graded series of ethanol, embedded in paraffin, and sectioned at 7-mm intervals. After the sections were dewaxed and rehydrated, they were stained with hematoxylin and eosin (Wako Pure Chemical Industries, Ltd., Osaka, Japan).
+ Open protocol
+ Expand
7

Histological Analysis of Wound Healing

Check if the same lab product or an alternative is used in the 5 most similar protocols
The skin tissues were collected and fixed overnight with 4% paraformaldehyde following by washing with PBS and soaking in 10% sucrose for 2 h and then 20% sucrose overnight. The wound tissues were embedded in O.C.T compound (Sakura Finetek, Tokyo, Japan) and frozen in liquid nitrogen to make frozen blocks of samples. The frozen wound tissue sections were mounted, stained with hematoxylin and eosin (Wako), and observed under a microscope (Olympus, Kyoto, Japan) to assess the tissue structure.
Immunohistochemical staining was used to analyze the role of AT-MSCs in recruiting inflammatory cells and forming vessels at wound sites. The inflammatory cells recruited to the ischemic area were examined by immunohistochemical staining of the wound tissues with rat anti-mouse CD45 (553078; BD Pharmigen Inc., San Diego, CA, USA), and rat anti-mouse Mac1 (rat anti-mouse CD11b 550282; BD Pharmigen). The neovascularization was analyzed by immunohistochemical staining of wound tissues with rat anti-mouse CD31 (553370; BD Pharmigen), according to the manufacturer’s instructions. The numbers of positive cells were counted in 10 randomly selected fields, and the average was determined.
+ Open protocol
+ Expand
8

Wound Histology and Vascularization Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
The skin tissues were fixed overnight with 4% paraformaldehyde, then washed with PBS and soaked in 20% sucrose for 2 h. The wound tissues were embedded in O.C.T compound (Sakura Finetek, Tokyo, Japan) and frozen in liquid nitrogen. The frozen wound tissue sections on the seventh day post-injection were mounted, stained with hematoxylin and eosin (Wako, Osaka, Japan), and observed under a microscope (Olympus, Kyoto, Japan) to assess the tissue structure. Neovascularization was analyzed by immunohistochemical staining of wound tissues with rat anti-mouse CD31 (Lot. 53198; BD Pharmigen), according to the manufacturer’s instructions. The numbers of positive cells were counted in 10 randomly selected fields, and the average number was determined. For PKH26-labeled EV tracking, the tissue sections on the first day post-injection were mounted, stained with DAPI, and observed under a fluorescence microscope (Keyence, BZ-X710). The number of PKH26-positive signals was counted in 30 randomly selected sections per group, and the average number was determined.
+ Open protocol
+ Expand
9

Synovial Tissue Analysis in Arthropathy

Check if the same lab product or an alternative is used in the 5 most similar protocols
Synovial tissues were collected from the hip joints of OA, ONFH, and RDC patients who were undergoing total hip arthropathy. Tissues from inflamed synovial membranes were selected according to standardized macroscopic criteria. 19 Synovial tissues were fixed with formalin, embedded in paraffin, and then sectioned into slices (3 mm thick) for staining with hematoxylin and eosin (Wako, Tokyo, Japan). These specimens were stained using a stain for tartrate-resistant acid phosphatase (TRAP; Wako) 20 and antibodies targeting CD68 (Dako Agilent, Santa Clara, CA), NF-kB P65 (Sigma-Aldrich, St. Louis, MO), nod-like receptor family protein 3 (NLRP3; Novus Biologicals, Centennial, CO), and GSDMD (Cell Signaling, Danvers, MA). Signals were amplified with horseradish peroxidaseeconjugated, streptavidin-specific antibodies, followed by counterstaining with hematoxylin.
+ Open protocol
+ Expand
10

Histological Analysis of Rat Optic Nerve

Check if the same lab product or an alternative is used in the 5 most similar protocols
The rats were euthanized 24 hours after LPS injection, and the eyes were enucleated immediately, stored in 4% paraformaldehyde in 0.1 M PBS (Wako Pure Chemicals), and then embedded in paraffin. Sagittal sections (5 lm) were cut through the optic nerve head and stained with hematoxylin and eosin (Wako Pure Chemicals).
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!