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5 protocols using alexa fluor 488 anti rabbit a11034

1

Immunofluorescence Labeling of VTA Neurons

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Under general anesthesia with 1% pentobarbital sodium (40 mg/Kg, i.p.), the mice were intracardially perfused with 30 mL cold PBS (pH 7.4) and 30 mL 4% paraformaldehyde. The brains were removed and post-fixed at 4°C overnight, then kept in 30% sucrose for 2 days. Coronal sections (30 µm) were cut on a freezing microtome (VT1000S, Leica Microsystems). VTA sections were directly imaged for lumafluor, EGFP, and mCherry expression on a laser scanning confocal microscope (FluoView FV1000; Olympus).
For immunofluorescence staining, the sections were blocked for 1 h with 3% donkey serum and 0.25% Triton X-100 in PBS at room temperature. Then they were incubated with the primary antibodies rabbit anti-Kv7.2 (KCNQ2, 1:100; APC-050, Alomone Labs), rabbit anti-Kv7.3 (KCNQ3, 1:100; APC-051, Alomone Labs), and mouse anti-tyrosine hydroxylase (1:600, 318; Millipore), at 4°C overnight. The sections were then incubated for 2 h at room temperature with the secondary antibodies Alexa Fluor 488 anti-rabbit (A-11034), AlexaFluor 594 anti-mouse (A-11032), and AlexaFluor 488 anti-mouse (A-32723) (1:200, Molecular Probes), and rinsed three times with PBS before mounting. Afterwards, the sections were visualized under an Olympus confocal microscope.
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2

Immunostaining of C. elegans Embryos

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Immunostaining was performed using a methanol-4%formaldehyde fix as previously described71 (link), and the following primary antibodies were used: anti-ATX-2 mouse monoclonal (1:100;Ciosk, 200421) and anti-GFP rabbit polyclonal (1:100; ab6556; Abcam) diluted in 1X PBS and 1% BSA (PBSB). Following an overnight incubation at 4°C, unbound primary antibodies were washed with PBST (1x PBS, 0.5% Tween). The secondary antibodies used were Alexa Fluor 568 anti-mouse (A-11004; Molecular Probes) and Alexa Fluor 488 anti-rabbit (A-11034; Molecular Probes) diluted 1:200 in PBSB. Secondary antibodies incubated at room temperature for 2 hours, and unbound secondary antibodies were removed with PBST washes. Embryos were mounted with Vectashield containing DAPI (H-1200; Vector Laboratories). Confocal imaging was performed on a departmental Zeiss 510 Confocal LSM operated with ZEN software (Carl Zeiss, Germany).
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3

Multicolor Immunostaining of Pancreatic Islets

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Immunohistochemistry was performed, as previously described (9 (link), 24 (link), 110 (link)). In brief, pancreas samples were fixed in 4% paraformaldehyde and paraffin embedded. Sections were deparaffinized in a xylene ethanol series and placed in Tris-EDTA (TE) buffer for antigen retrieval (10 mM Tris, 1 mM EDTA, 0.05% Tween, pH = 9.0) and then blocked in 5% BSA. Sections were immunostained for insulin using a monoclonal anti-mouse antibody (Santa Cruz Biotechnology, SC-377071; 1:100) and for glucagon using a monoclonal anti-rabbit antibody (Santa Cruz Biotechnology, SC-7779R; 1:200). Separate sections were immunostained for GLP-1 using a monoclonal anti-mouse antibody (Abcam, ab26278; 1:100) and glucagon using a monoclonal anti-rabbit antibody (Santa Cruz Biotechnology, SC-7779R; 1:200). Separate sections were immunostained for PC1/3 using a monoclonal anti-mouse antibody (Abcam, ab3532; 1:200) and glucagon using a monoclonal anti-rabbit antibody (Santa Cruz Biotechnology, SC-514592; 1:200). Detection of primary antibodies was performed with Alexa Fluor 488 anti-rabbit (A11034), Alexa Flour 488 anti-mouse (A11001), Alexa Flour 633 anti-mouse (A21052), and Alexa Fluor 633 anti-rabbit (A21070) secondary antibodies (1:200) (Invitrogen). Nuclei were detected with DAPI (Invitrogen, P36962).
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4

Quantification of Protein Expression

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Primary antibodies (TRX #2429, p-ASK1 #3765, p-JNK1/2 #9251, JNK1/2 #9252, Cleaved Caspase-3 #9664, HA-Tag #3724, GAPDH #5174) were purchased from Cell Signaling Technology (Danvers, MA, USA). Secondary antibodies (Alexa Fluor® 488 anti-rabbit #A-11034 and anti-rabbit #sc-2004) were purchased from Invitrogen (Carlsbad, CA, USA) and Santa Cruz Biotechnology (Santa Cruz, CA, USA), respectively. CONPs were purchased from the NanoScale Corporation (Manhattan, KS, USA) or synthesized as previously described [14 (link),36 (link)]. For western blotting, cells were plated in 10 cm dishes and left to attach overnight. Media was then removed and replaced with media containing 0 or 10 µM CONPs. 24 h later, cells were exposed to 0 or 5 Gy RT with cell lysates collected 24–72 h after radiation. Proteins were separated on 12.5% SDS-PAGE gels, transferred to nitrocellulose membranes using the iBlot system (Invitrogen, Carlsbad, CA, USA), and blotted following standard procedures. The chemiluminescence in the blots were recorded and quantified by selecting the same exposure duration for all the membranes using Image Lab 3.0 (Bio-Rad, Hercules, CA, USA) as described previously [35 (link)].
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5

Immunofluorescence Assay for xCT and TOMM20

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Cells (1 × 105 cells/well) were seeded in 24-well plates and cultured either in control or stimulated/challenged conditions. After 16 h of experimental conditions, cells were fixed with 4% paraformaldehyde for 15 min at 4°C and permeabilized with saponin 0.1% in PBS-BSA (PBS buffer containing 0.5%, w/v, bovine serum albumin) for 15 min at room temperature. Cells were then incubated with anti-xCT (ab175186, abcam) for 30 min (diluted 1:100 in PBS-BSA) and incubated with secondary antibody for 2 h at room temperature (Alexa Fluor® 488 anti-rabbit, A-11034, Invitrogen) (1:1000 in PBS-BSA). The protocol was repeated for anti-TOMM20 (1:100 in PBS PBS-BSA; ab186734 from abcam) for 2 h at room temperature and incubated with secondary antibody for 2 h at room temperature (Alexa Fluor® 594 anti-rabbit, A-11037, Invitrogen) (1:1000 in PBS-BSA).
The slides were mounted in VECTASHIELD media with 4′-6-diamidino-2-phenylindole (DAPI) (Vector Labs) and examined by standard fluorescence microscopy (Zeiss Imajer.Z1 AX10 microscope). Images were acquired and processed with CytoVision software.
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