The largest database of trusted experimental protocols

Uk bileve axiom array chip

Manufactured by Thermo Fisher Scientific

The UK BiLEVE Axiom Array chip is a high-density genotyping microarray designed for whole-genome association studies. It contains probes for the detection of genetic variants across the human genome.

Automatically generated - may contain errors

Lab products found in correlation

5 protocols using uk bileve axiom array chip

1

UK Biobank Interim GWAS Protocol

Check if the same lab product or an alternative is used in the 5 most similar protocols
Our GWAS analysis is performed using data from the interim release of the first ˜150k UK Biobank (UKB) participants (Supplementary Note): ˜100k individuals from UK Biobank genotyped at ˜800,000 single nucleotide variants (SNVs) with a custom Affymetrix UK Biobank Axiom Array chip and ˜50k individuals genotyped with a custom Affymetrix UK BiLEVE Axiom Array chip from the UK BiLEVE study63 (link), a subset of UKB. SNVs were imputed centrally by UKB using a merged UK10K sequencing + 1000G imputation reference panel. UK Biobank array design and protocols are available on the UK Biobank website.
+ Open protocol
+ Expand
2

Comprehensive UK Biobank Cohort Study

Check if the same lab product or an alternative is used in the 5 most similar protocols
UK Biobank is a prospective cohort study with over 500,000 individuals with an age range of 38 to 73 years at recruitment between 2006 and 2010 from 22 study centers in England, Scotland, and Wales. Data on anthropometry, lifestyle, health-related indicators, and biological samples were collected (42 , 43 (link)). Up to 488,377 individuals were genotyped using either a custom Affymetrix UK Biobank Axiom Array chip or a custom Affymetrix UK BiLEVE Axiom Array chip (43 (link)).
+ Open protocol
+ Expand
3

GWAS Analysis of UKB Participants

Check if the same lab product or an alternative is used in the 5 most similar protocols
We conducted a Genome Wide Association Study (GWAS) analysis among 458,577 UKB participants of European descent, identified from a combination of self-reported and genetic data. The details of the selection of the participants has been described elsewhere14 (link). These comprise 408,951 individuals from UKB genotyped at 825,927 variants with a custom Affymetrix UK Biobank Axiom Array chip and 49,626 individuals genotyped at 807,411 variants with a custom Affymetrix UK BiLEVE Axiom Array chip from the UK BiLEVE study, which is a subset of UKB. For our analyses, we used SNPs imputed centrally by UKB using the Haplotype Reference Consortium (HRC) panel.
+ Open protocol
+ Expand
4

UK Biobank Genome-Wide Association Study

Check if the same lab product or an alternative is used in the 5 most similar protocols
We performed a Genome Wide Association Study (GWAS) analysis in 458,577 UKB participants13 (link) (Supplementary Methods). These consist of 408,951 individuals from UKB genotyped at 825,927 variants with a custom Affymetrix UK Biobank Axiom Array chip and 49,626 individuals genotyped at 807,411 variants with a custom Affymetrix UK BiLEVE Axiom Array chip from the UK BiLEVE study57 (link), which is a subset of UKB. SNPs were imputed centrally by UKB using a reference panel that merged the UK10K and 1000 Genomes Phase 3 panel as well as the Haplotype Reference Consortium (HRC) panel58 . For current analysis only SNPs imputed from the HRC panel were considered.
+ Open protocol
+ Expand
5

UK Biobank Interim GWAS Protocol

Check if the same lab product or an alternative is used in the 5 most similar protocols
Our GWAS analysis is performed using data from the interim release of the first ˜150k UK Biobank (UKB) participants (Supplementary Note): ˜100k individuals from UK Biobank genotyped at ˜800,000 single nucleotide variants (SNVs) with a custom Affymetrix UK Biobank Axiom Array chip and ˜50k individuals genotyped with a custom Affymetrix UK BiLEVE Axiom Array chip from the UK BiLEVE study63 (link), a subset of UKB. SNVs were imputed centrally by UKB using a merged UK10K sequencing + 1000G imputation reference panel. UK Biobank array design and protocols are available on the UK Biobank website.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!