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12 protocols using chick embryo extract

1

Isolation of Rat Aortic Smooth Muscle Cells

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MVSCs were isolated from rat aortic explants as described previously [5 (link)]. Briefly, male Sprague Dawley rats were first anesthetized with pentobarbital sodium (0.1 mg/g) and then perfused with 10 mL of PBS. Arterial tissues were harvested as quickly as possible and further dissected in DMEM supplemented with 1% fetal bovine serum (FBS). The aorta was then isolated from the lower thoracic aorta to the upper abdominal aorta. The endothelium was removed by scraping off the cell layer on the luminal surface with sterile scalpel blade before the adventitia was carefully removed from media following brief enzymatic digestion with 2.5 mg/mL of collagenase for 15 min at 37°C using forceps under a dissection microscope. The remaining media was cut into 1-mm pieces, placed onto the surface coated with 1% CellStart (Invitrogen) in 6-well plates and grown in MVSC culture medium containing DMEM with 2% chick embryo extract (MP Biomedical), 1% FBS, 1% N2 (Invitrogen), 2% B27 (Invitrogen), 100 nM retinoic acid (Sigma-Aldrich), 50 nM 2-mercaptoethanol (Sigma-Aldrich), 1% P/S and 20 ngml-1 bFGF (R&D Systems) (maintenance medium). All procedures were approved by the University Animal Care Committee and were carried out in accordance with EU guidelines for the Protection of Animals used for Scientific Purposes, (Amendment) Regulations 2013 (S.I. No 434 of 2013).
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2

Isolation and Differentiation of Mouse CD34+ Cells

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Isolation of mouse heart cells and CD34+ cells was performed as previously described [29 (link), 30 (link)]. Then, cells were sorted with anti-CD34 magnetic beads (Miltenyi Biotec) according to manufacturer’s instructions. The cells were cultured as specified previously [31 (link)]. The purified CD34+ cells were seeded onto dishes with 0.1% gelatin (Sigma, G1393) and maintained in complete stem cell culture medium, which consists of DMEM, 1% FBS, 2% chick embryo extract (MP Biomedical), 100 nM retinoic acid (Sigma-Aldrich), 50 nM 2-mercaptoethanol (Sigma-Aldrich), 2% B27 (Invitrogen), 1% N2 (Invitrogen), 20 ng /ml bFGF (R&D Systems) and 1% P/S.
For cell differentiation experiments, CD34 + cells were cultured on gelatin-coated plates and maintained in complete stem cell culture with 50 ng/mL CTGF (Recombinant Human Connective Tissue Growth Factor, PeproTech, 120–19-20), which is sufficient to differentiate MSCs into fibroblast cells [32 (link)]. In the presence of recombinant TGFβ1 (5 ng/mL) (R&D systems, 7666-MB-005), cells were also treated with inhibitors including SB525334 (a selective TGFβ1 receptor inhibitor) (2 μM).
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3

Isolation and Culture of YFP-Labeled MuSCs

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YFP-labeled MuSCs were isolated by FACS from control and cKO mice specified in text, figures, and legends. Briefly, hindlimb muscles were minced and digested with 0.2% collagenase (Worthington Biochemical) for 90 min followed by 0.2% dispase (Thermo Fisher Scientific) for 30 min in 37°C shaking water bath. Triturated muscle suspension was filtered through a 40 μm cell strainer (Corning) and subjected to isolation by BD FACSAriaIII. For culture, mononuclear cells were seeded on Matrigel (Corning) coated plates in growth media (DMEM with 20% FBS, 5% horse serum, 1% pen-strep, 1% glutamax (above from Gibco), 0.1% chick embryo extract (MPbio) and 2 ng/mL FGF2; R&D systems) for specified time in text and legends, before fixation and analysis.
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4

Cultured Myofiber Aging Protocol

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Myofibers from EDL (Extensor Digitorum Longus) of young and aged mice were isolated in accordance with ref. 62 . The isolated myofibers digested using Collagense Type I (Cat# SCR103, Sigma-Aldrich) were grown cultured in 8-well Chamber Slide (177445PK, Thermo Fisher Scientific) coated with Corning® Matrigel® (734-0272, VWR) in DMEM,1% Pen/Strep, 1% Chick embryo extract (092850145, MP Biomedicals) at 37 °C. After 24 h in culture with and without CASIN, the myofibers were fixed for immunostainings.
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5

Murine Satellite Cell Expansion

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Prior to cell seeding, culturing dishes (12, 24, and 48 wells) were coated with Matrigel (Corning, 354248; 30 min at 37°C or overnight at 4°C) and filled with MuSC growth medium: 10 ng/ml FGF, 20% fetal bovine serum (FBS), 5% HS, 1% Pen/Strep, 1% Glutamax (Gibco), 0.1% chick embryo extract (MP biomedicals) in DMEM (Gibco). YFP‐positive and DAPI‐negative cells were plated at appropriate cell densities into the culturing plates and cultured at 37°C in tissue culture incubators with 5% CO2 for 4 days to allow for cell expansion and downstream assays.
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6

Single Myofiber Satellite Cell Activation Assay

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Single myofibers were obtained by collagenase digestion of EDL and peroneus muscles, as previously described (Hawke et al. 2003 (link)). Briefly, following collagenase digestion, muscles were triturated with plastic Pasteur pipettes and moved to cell culture dishes with a glass Pasteur pipette. Floating cultures were achieved by coating dishes with 10% normal horse serum prior to addition of plating media (10% normal horse serum, 0.5% chick embryo extract [MP Biomedicals] in low-glucose [1 g/L] Dulbecco’s modified Eagle’s medium [DMEM; Invitrogen]). Single myofibers were incubated in one of three conditions: basal (plating media alone), Recombinant Mouse HGF (R&D, 10 ng/mL), or dimethylsphingosine (DMS, 10 μmol/L) for 45 min, prior to the addition of BrdU to the medium. Satellite cell activation was determined by performing immunoflu-orescence on single myofibers following a 24-h incubation in 5-bromo-2-deoxyuridine (BrdU; Sigma, 10 μmol/L), as previously described (Nissar et al. 2012 ). The number of BrdU-positive SCs per myofiber were counted on at least 12 myofibers per treatment group as a measure of the functionality of SCs becoming activated by HGF.
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7

Immortalized Myoblast Culture and Differentiation

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MB135-DUX4i myoblasts were grown essentially as described previously (36 ) in MB135 media (20% FBS, 1% antibiotic antimycotic, 10 ng/mL FGF [Gibco PHG0026], 10 mM dexamethasone [Sigma, St. Louis, MO, D4902] in Ham’s F10 media). Immortalized 16ABic and 01ABic myoblasts were grown on gelatin-coated (Sigma G9391) plates in HMP media (20% FBS, 1% antibiotic/antimycotic, 1.2 mM CaCL2, 0.5% chick embryo extract [MP Biomedicals, Santa Ana, CA, 092850145]). Myotubes were generated by plating 4–6X105 myoblasts per well on gelatin-coated 6-well plates. The following day cells were washed with PBS, and media was replaced with 15% KOSR differentiation media, essentially as described (80 (link)) (glutamax substituted for L-glutamine), and allowed to differentiate for 4 days. Media was then replaced and supplemented with the relevant compound for 24 hours. All experiments were performed on three independently grown cell cultures unless otherwise noted.
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8

Expansion of Muscle Stem Cells

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Prior to cell seeding, culturing dishes (12-, 24-, and 48 wells) were coated with Matrigel (Corning, 354248; 30 min at 37 °C or overnight at 4 °C) and filled with MuSC growth medium: 10 ng/ml FGF, 20% Fetal Bovine Serum (FBS), 5% HS, 1% Pen/Strep, 1% Glutamax (Gibco), 0.1% chick embryo extract (MP biomedicals) in DMEM (Gibco). YFP positive and DAPI negative cells were plated at appropriate cell densities into the culturing plates and cultured at 37 °C in tissue culture incubators with 5% CO2 for 4 days to allow for cell expansion and downstream assays.
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9

Culturing Neural Tube Derived Cells

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Neural tube derived cells were cultured in NC medium (DMEM with 4.5 g/L glucose (Corning), 7.5% chick embryo extract (MP Biomedicals, Santa Ana,California), 1X B27 (Life Technologies), basic fibroblast growth factor (bFGF, 20 ng/mL) (Peprotech, Stockholm, Sweden), insulin growth factor‐I (IGF‐I, 20 ng/mL) (Sigma Aldrich, Darmstadt, Germany), retinoic acid (RA; 60 nM for cranial and 180 nM for trunk, respectively) (Sigma Aldrich), and 25 ng/mL BMP‐4 (for trunk) (Peprotech)) in low‐adherence T25 tissue culture flasks as described previously.24, 25
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10

Culturing Human Skeletal Muscle and Breast Cancer Cells

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Human skeletal muscle cells (CC-2561; BioWhittaker, Walkersville, MD) were cultured on collagen-coated tissue culture dishes in F-10 nutrient mixture medium (Thermo Fisher Scientific) supplemented with 20% fetal bovine serum (FBS; Atlanta Biologicals, Flowery Branch, GA), 0.5% chick embryo extract (MP Biomedicals, Santa Ana, CA), and 1% glutamine-penicillin-streptomycin (Thermo Fisher Scientific). To promote differentiation, skeletal muscle cells were subsequently cultured in 1:1 Dulbecco’s modified Eagle’s medium (DMEM)/F-12 medium (Thermo Fisher Scientific) supplemented with 2% horse serum (Thermo Fisher Scientific). Human breast cancer cells (MDA-MB-231; ATCC, Manassas, VA) were cultured in 1:1 DMEM/F-12 medium supplemented with 10% FBS and gentamicin (50 μg/ml; Sigma-Aldrich). Both cell lines were maintained in an incubator at 37°C under 5% CO2.
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