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6 protocols using cacl2

1

Yoghurt Starter Culture and Probiotics

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A commercial yoghurt starter culture (YOFLEX®—consisting of Streptococcus thermophilus and Lactobacillus delbrueckii subsp. bulgaricus) and three probiotic strains (Lacticaseibacillus rhamnosus LGG, Lacticaseibacillus casei 431, Bifidobacterium animalis subsp. lactis BB-12) were kindly supplied by Chr. Hansen, Bayswater, VIC, Australia. Powdered skim milk (Australian instant skim milk powder, Coles) was obtained from a local supermarket in Melbourne, VIC, Australia. Pancreatin was purchased from Alfa Aesar (Ward Hill, MA, USA). Mangiferin, pyrogallol, gallic acid, caffeic acid, 3-hydroxy phenyl acetic acid, 3-(2-hydroxyphenyl) propionic acid, porcine pepsin, α-amylase from aspergillus oryzae, p-nitrophenyl-α-d-glucopyranoside, bile salts, LC-MS grade formic acid, acetic acid, 4-methyl valeric acid, guar, casein, tryptone, cysteine HCl, peptone, mucin, pectin, potato starch, yeast extract, and MRS agar were acquired from Sigma–Aldrich (Castle Hill, NSW, Australia). Sodium carbonate (anhydrous), HCl, NaHCO3, NaOH, (NH4)2CO3, KCl, NaCl, KH2PO4, MgCl2(H2O)6, CaCl2, K2HPO4, Na3PO4, MgSO4.7H2O Tween 80, orthophosphoric acid, acetonitrile, and methanol of HPLC grade were acquired from Chem-supply Pty Ltd. (Melbourne, VIC, Australia).
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2

High-Throughput SrtA Inhibition Assay

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𝛽-LG, tris (hydroxymethyl) aminomethane (Tris) hydrochloride, TC, QC, BR, CUR, resazurin, agar, methanol (MeOH), ethanol (EtOH), sodium dodecyl sulfate (SDS), hydrochloric acid (HCl), Mueller—Hinton broth (MHB), and dimethylsulfoxide (DMSO) were purchased from Merck (Castle Hill, NSW, Australia). Propylene glycol liquid (USP) was purchased from the Melbourne Food Ingredient Depot (Melbourne, VIC, Australia). Triton X-100, CaCl2 and NaCl were purchased from Chem-Supply (Gillman, SA, Australia). Triisopropylsilane (TIPS) was purchased from Alfa Aesar (Tewksbury, MA, USA). The SrtAΔN59 enzyme was expressed and purified as previously described [4 (link)]. Dulbecco’s modified eagle medium (DMEM), fetal bovine serum (FBS), and penicillin/streptomycin were purchased from Thermo Fisher Scientific (Scoresby, VIC, Australia). PEX, INDO, MASTO, the quenched fluorescent resonance energy transfer (FRET) peptide (Abz-LPETGK(Dnp)-NH2), and Gly3-amide peptides were synthesized as previously described [9 (link)]. The bacterial library used herein consisted of S. aureus (ATCC25923), MRSA (ATCC43300), E. coli (ATCC25922), and P. aeruginosa (ATCC27853).
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3

Antioxidant and Enzyme Inhibition Assays

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Caffeic acid, quercetin, quercetin-3-galactoside, gallic acid, p-coumaric acid, chlorogenic acid, rutin, luteolin, phloretin, epicatechin, kaempferol-3-glucoside, catechin, quercetin, procyanidin B1, pyrogallol, epicatechin 3′-O-gallate, 3-hydroxybenzoic acid, protocatechuic acid, benzoic acid, cinnamic acid, polydatin, Folin-Ciocalteu phenol reagent (FCR), α-amylase from aspergillus oryzae, porcine pepsin, acarbose, rat intestinal powder, ammonium molybdate, Trolox (6-hydroxy-2,5,7,8-tetramethylchroman-2-carboxylic acid), DPPH (2,2-diphenyl-1-picrylhydrazyl), ABTS 2,2′-azino-bis (3-ethylbenzothiazoline-6-sulfonic acid), p-nitrophenyl-α-d-glucopyranoside, potassium persulfate, bile salts, LC-MS grade formic acid, and HPLC grade acetic acid were purchased from Sigma-Aldrich (Castle Hill, NSW, Australia). Pancreatin was obtained from Alfa Aesar (Ward Hill, MA, USA). NaCl, Na2CO3, KCl, NaOH, HCl, NaHCO3, (NH4)2CO3, MgCl2(H2O)6, CaCl2, KH2PO4, K2HPO4, Na3PO4, HPLC grade methanol and acetonitrile were purchased from Chem-supply Pty Ltd. (Melbourne, VIC, Australia).
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4

Probiotic Bacteria and Cocoa Compounds Interaction

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The L. delbrueckii subsp. bulgaricus probiotic bacteria were used from the stock culture collections in the Food Microbiology Laboratory at the University of Melbourne. Fructooligosaccharides (FOS), Na-alginate, enzymes (salivary α-amylase, porcine pepsin, pancreatin), HCl, acetone, acetic acid, epicatechin, catechin, procyanidin B1, procyanidin B2, quercetin 3-O-galactoside, quercetin 3-O-glucoside were purchased from Sigma Aldrich (Castle Hill, NSW, Australia). A standard mixture of short chain fatty acids (SCFAs) was purchased from Cayman Chemical (Ann Arbor, MI, USA). The selective media DeMan, Rogosa and Sharpe (MRS), nutrient agar & broth, AnaeroGen sachets, yeast extract, beef extract, protease peptone, n-hexadecane, L-cysteine hydrochloride, bile salts, and trichloroacetic acid were purchased from Thermo Fisher Scientific Pty Ltd (Melbourne, VIC, Australia). NaOH, phosphate-buffered saline, CaCl2, dextrose, K2HPO4, (NH4)2SO4, MgSO4·7H2O, NaCl, KCl, NaHCO3, MgCl2(H2O)6, (NH4)2CO3, potassium persulfate, potassium acetate, aluminum chloride were ordered from the Chem-Supply Pty Ltd. (Melbourne, VIC, Australia). Chocolates with 45% and 70% cocoa mass, cocoa powder (pure), cocoa liquor, cocoa butter, sugar, soy lecithin were purchased from local supermarket (VIC, Australia).
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5

Probiotic Encapsulation and Gut Simulation

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The L. rhamnosus LGG strain was kindly provided by Chr. Hansen, Bayswater, VIC, Australia. Na-alginate, Fructooligosaccharides-FOS, hi-maize resistant starch, skim milk powder and enzymes (salivary α-amylase, porcine pepsin, pancreatin), acetone, HCl, acetic acid were bought from Sigma Aldrich (NSW, Australia). Whey protein concentrate was gifted by Murray Goulburn Co-operative Co. Limited (Victoria, Australia). The nutrient agar & broth, selective media DeMan, Rogosa and Sharpe (MRS), AnaeroGen sachets, beef extract, yeast extract, protease peptone, bile salts, and trichloroacetic acid were purchased from Thermo Fisher (Thermo Fisher Scientific Pty Ltd, VIC. Australia). NaOH, phosphate-buffered saline, CaCl 2 , dextrose, K 2 HPO 4 , (NH 4 ) 2 SO 4 , MgSO 4 •7H 2 O, NaCl, KCl, NaHCO 3 , MgCl 2 (H 2 O) 6 , (NH 4 ) 2 CO 3 , potassium acetate, aluminium chloride, potassium persulfate were procured from the Chem-Supply Pty Ltd, (Melbourne, Australia)
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6

Surface Modification of ePTFE Membranes for Biomineralization

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The expanded poly(tetrafluoroethylene) (ePTFE) membrane was obtained from Pall Corporation under the trade name of Zefluor™ 1.0 μm, where the 1.0 μm refers to the pore size in the membrane. This membrane has a thickness of 0.01 mm. Grafted membranes were prepared as previously published. Samples AA(0.3)-R and AA(1.3)-R were prepared by gamma irradiation grafting of acrylic acid (AA) at a dose of 10 kGy and monomer concentrations of either 0.3 or 1.3 M with the addition of Mohr's salt [17] , [18] . Sample AA/IA(3)-R was prepared by gamma irradiation induced grafting at a dose of 10 kGy of a monomer mixture of AA (70%) and itaconic acid (IA) with a total monomer concentration of 3.0 M with the addition of Mohr's salt [18] . Sample AA-P was prepared by argon plasma-induced grafting exposing the membrane to the plasma generated at 100 W for 150 s and subsequently reacting with a 2.6 M solution of AA for 3 h [19] . HAP and tricalcium phosphate (TCP) were from Merck. The chemicals used for preparation of simulated body fluid (SBF and 1.5 × SBF) were: NaCl (99%), NaHCO3 (99.7%), K2HPO4.3H2O (≥99%) and Na2SO4 (99%) were from Ajax Finechem, KCl (≥99.5%) was from Merck, MgCl2.6H2O (98%) was from Sigma Aldrich, Tris(hydroxymethyl)aminomethane (99.8%) was from Spectrum Chemical MFG Corp. and CaCl2 (93%) was from Chem-Supply. MilliQ water was used throughout.
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