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2 protocols using ab50533

1

Immunofluorescence Microscopy of H. pylori Infection

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Antibodies used in this work are commercially available, as follows: from Abcam (Cambridge, UK), anti-H. pylori (ab20459) [24 (link)], rabbit anti-Lamp-1 (ab25030-100), mouse anti-EEA1 (ab2900), rabbit anti-Rab7 (ab50533), rabbit anti-Na+K+ ATPase (ab76020), rabbit anti-cathepsin D (ab75852), and rabbit anti-histone H3 (ab1791); from Sigma-Aldrich (Missouri, USA), rabbit anti-LC3B (L7543). Additionally, the following reagents were purchased: LysoTracker® Red DND-99 (Invitrogen, California, USA; L7528), cholera toxin B staining kit (Invitrogen; V34404), Magic Red™ cathepsin B staining kit (Bio-Rad, California, USA; ICT937), Oregon Green™ 488 BAPTA-5N (Invitrogen California, USA; O6812), Dextran Alexa Fluor™ 568 (Invitrogen California, USA; D22912), LysoSensor™ Yellow/Blue DND-160 (Invitrogen California, USA; L7545), 3-methyl adenine (Sigma; M9281), chloroquine (Sigma; C6628), rapamycin (Sigma; R8781), bafilomycin-A1 (Sigma; B1793), and concanamycin A (Sigma; C9705).
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2

Western Blot Analysis of Pancreatic Proteins

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Protein lysates from whole pancreas were prepared in 1 mL of RIPA buffer supplemented with phosSTOP phosphatase and protease inhibitors (Roche). Protein concentrations were measured using the BCA kit (Thermo Scientific) and then diluted in 4 x Laemmeli buffer (40% glycerol, 8% SDS, 240 mM Tris-HCl pH 6.8, 5% b-mercaptoethanol, 12.5 mM EDTA, 0.04% bromophenol blue) and RIPA buffer at 10 mg/mL. 10 mL of lysate was resolved on 8% SDS-PAGE and transferred to Nitrocellulose membrane (BioRad). Membranes were blocked with 5% milk in Tris-buffered saline with 1% Tween 20 (TBST) for 1hr, followed by overnight incubation at 4 C with primary antibodies such as NFIA (Fancy et al., 2012 ; at 1:1000), Chga (DSHB at 1:200), Sox9 (Santa Cruz Biotech. SC20095 at 1:200), Chmp4c (Abcam, ab155668 at 1:500), Mib1 (Novus, NBP1-85210 at 1:500), Dll1 (from Christel Brou at 1:1000), Notch1 (from Christel Brou at 1:1000), NICD1 (Abcam, ab8925 at 1:1000), Hes1 (VWR, 100192-118 at 1:500), Rab5 (Abcam, ab18211 at 1:200), Rab7 (Abcam, ab50533 at 1:200), and b-actin (Sigma, A5441 at 1:5000). Membranes were washed three times with TBST before incubation for 1 hour with either anti-rabbit IgG conjugated to horseradish peroxidase (HRP) for NFIA (GE Life Sciences) or anti-mouse IgG-HRP for b-actin (GE Life Sciences). Expression was quantified using ImageJ and normalized to b-actin.
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