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3 protocols using bdnf sc 546

1

Dendrobium Extract: Alkaloid Profiling and Neuroprotection

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Dendrobium was collected from Dendrobium planting regions of Xintian Traditional Chinese Medicine Industry Development co., LTD of Guizhou Province in 2014. The dried stems of the herb (10 kg) were extracted by 95% ethanol solution. DNLA was isolated from the extracts, and analyzed by LC-MS/MS. Alkaloids accounted for 79.8% of DNLA, and mainly contained Dendrobine (C16H25O2N, 92.6%), Dendrobine-N-oxide (C16H25O3N, 3.3%), Nobilonine (C17H27O3N, 2.0%), Dendroxine (C17H25O3N, 0.9%), 6-Hydroxy-nobilonine (C17H27O4N, 0.32%), and 13-Hydroxy-14-oxodendrobine (C16H23O4N, 0.07%). The chemical structures of these ingredients were shown in the Fig. 1A, and the chromatograms of the sample solutions were shown in the Fig. 1B.
25–35 (Sigma, St Louis, MO, USA) was dissolved in physiological saline to a final concentration of 2.5 g/L, and incubated for one week at 37 °C to reach a state of aggregation. CNTF antibodies (ab190985) and GDNF antibodies (ab18956) were obtained from Abcam (Cambridge, England). BDNF (sc-546) was purchased from Santa Cruz Biotechnologies (Santa Cruz, CA, USA). TUNEL kits (In Situ Cell Death Detection Kit and POD) were purchased from Roche (Switzerland).
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2

Protein Extraction and Western Blotting

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For total protein extraction, the frozen liver tissue was homogenised in Nonidet P-40 lysis buffer. The following antibodies were used for western blotting: Nrf2 (sc-722), IL-1β (sc-7884), IL-6 (sc-7920) and BDNF (sc-546) (Santa Cruz Biotechnology, Dallas, TX); pIKK (#2697), STAT3 (#4904), FOXO1 (#2880), SOCS3 (#2932), and PTP1B (#5311) (Cell Signalling Technology, Beverly, MA). Both nuclear and cytosolic protein levels of Nrf2 were analysed. The bands corresponding to the proteins of interest were scanned and the band density analysed using the automatic imaging analysis system, Quantity One (Bio-Rad Laboratories, Hercules, California) as described in our previous study (Camer, Yu, Szabo et al., 2015) . All quantitative analyses for total and cytosolic proteins were normalised to β-actin.
Nuclear proteins were normalised to Lamin B.
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3

Protein Expression Analysis in Cell Cultures

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Proteins were extracted with the use of PRO-PREP Protein Extraction Solution (iNtRON Biotechnology, Sungnam, Korea) and transferred to nitrocellulose membranes. The membranes were incubated with primary antibodies for TrkB (1:250), BDNF (sc-546, Santa Cruz Biotechnology, 1:250), GAPDH (sc-32233, Santa Cruz Biotechnology, 1:500), MMP-2 (sc-10736, Santa Cruz Biotechnology, 1:200), MMP-9 (sc-6840, Santa Cruz Biotechnology, 1:200), E-cadherin (clone-36/E-Cadherin, BD Transduction Laboratories, Franklin Lakes, NJ, USA, 1:2500) and vimentin (clone-V9, Dako, 1:200) at 4 °C overnight, followed by peroxidase-labeled secondary antibodies at 37 °C. Immunoblots were identified using the ECL prime western blotting detection system (GE Healthcare Life Science, Buckinghamshire, UK) with a
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