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4 protocols using ab82592

1

Proteinase K Digestion and Bacterial Plasmolysis

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For the proteinase K digestion assay, equal amounts of MS_WT and MS_Rv0790c were collected and incubated with 100 μg/mL proteinase K at 37°C. PMSF (100 nM) was added at different time points to stop the reaction. Equal volumes of these bacteria were harvested and analyzed by western blotting, using an anti-Flag antibody for Rv0790c. For the bacterial plasmolysis assay, MS_WT and MS_Rv0790c bacterial cultures were ultrasonicated, and the cell lysates were centrifuged at 3,000 × g for 5 min. The supernatant was ultra-centrifuged at 27,000 × g for 40 min, after which they were identified as membrane-cytosol fractions and the pellets were identified as cell wall fractions. The expression of Rv0790c protein in each fraction was detected by western blotting using an anti-Flag antibody. GroEL, a mycobacterial cytosolic marker, was detected using an anti-GroEL antibody (Abcam, ab82592).
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2

Immunoblotting Analysis of Protein Samples

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Protein samples were boiled in 1 × SDS loading buffer and separated using a 4–12% gradient Bis-Tris Gel (M00653; GenScript) by SDS-PAGE. Subsequently, the separated proteins were transferred onto a 0.45 µm PVDF membrane (IPVH00010; Millipore) and blocked with 5% skimmed milk at room temperature for 2 h. Then, the blots were incubated for another 2 h at room temperature with the following primary antibodies: anti-FLAG (1:1000, F1804; Sigma), anti-GFP (1:1000, K200047M; Solarbio), anti-cytochrome c (1:1000, MA5–11674; Invitrogen), anti-Drp1 (1:1000, ab184247; Abcam), anti-SipA (Shanghai Willget Biotech Co., Ltd.), anti-GroEL (1:1000, ab82592; Abcam), anti-Tomm20 (1:1000, ab56783; Abcam), and anti-β-Actin (1:1000, CW0096; CWBIO). To detect proteins, the blots were incubated with the corresponding horseradish peroxidase (HRP)-conjugated anti-rabbit (EF0002; SparkJade) or anti-mouse (EF0001; SparkJade) secondary antibodies at room temperature for 1 h. Finally, the blots were visualized with an ECL detection kit (D601039; Sangon Biotech) using an AmershamTM Imager 600 system (General Electric). Immunoblotting bands were quantified using the ImageJ software. The data were collected from three biological replicates.
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3

Bacterial Lysate Immunoblotting Protocol

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Whole-cell lysates of bacterial cultures were prepared as described previously and analyzed by SDS-PAGE (12%) for immunoblotting. Mouse anti-serum against TlyA was used at a dilution of 1:10000, and monoclonal antibodies of anti-GroEL (BEI resources, NR-13813) and anti-HBHA (BEI resources, NR-13804) at 1:500 dilutions. The anti-mouse peroxidase-conjugated antibody (#7076 cell signaling) was used as a secondary antibody. The E. coli specific anti-GroEL (Abcam ab-82592) and anti-β-lactamase (Abcam ab-12251) antibodies were used at a dilution of 1:500.
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4

Identification of Endogenous Chaperones in E. coli

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Endogenous chaperones in the E. coli lysates were prepared and identified by western blot. After electrophoresis, the gel was transferred to PVDF membranes (Thermo Fisher Scientific) by using iBlot2 Transfer Stacks and iBlot2 Dry Blotting System. The membranes were blocked with 5% skim milk in TBST (20 mM Tris, 137 mM NaCl, 2.7 mM KCl, and 0.1% Tween-20) for 1 hour and then washed 3 times with TBST buffer. The blocked membranes were incubated with primary antibodies α-TF (M201, Takara), α-DnaK (ab69617, Abcam), α-DnaJ (ADI-SPA-410, Enzo), α-GroEL (ab82592, Abcam), and α-GroES (ab69823, Abcam) diluted in TBST overnight at 4°C. The membranes were washed 3 times in TBST, then incubated with a secondary antibody—α-mouse or α-rabbit IgG Ab conjugated with horseradish peroxidase (Sigma), depending on the origin of the first antibody – diluted 1:20,000 in TBST, for 40 minutes, and washed 3 times in TBST. The membranes were reacted with an ECL mixture using WEST-ZOL (Intron Biotechnology) and exposed to an X-ray film in a dark room.
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