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Karyomax colcemid

Manufactured by Thermo Fisher Scientific
Sourced in United States

KaryoMAX colcemid is a laboratory reagent used in cytogenetic analysis. It functions to arrest cells in metaphase, allowing for the visualization and analysis of chromosomes. The product is intended for research use only and not for use in diagnostic procedures.

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101 protocols using karyomax colcemid

1

Metaphase Arrest and Telomere FISH

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Cells were seeded out into 6 cm dishes and treated with PDS for 24 h. Karyomax colcemid (50 μl of 10 μg/ml, Gibco) was added to the cells for 1–4 h to arrest cells at the metaphase stage of mitosis. Cells were then trypsinised and collected. Pre-warmed hypotonic solution (75 mM KCl) was then added to the cells and incubated for 15 min at 37°C. Cells were spun down and fixative (3:1 methanol:glacial acetic acid) was gently added dropwise to the pellet to a final volume of 10 ml. Cells were incubated at –20°C for 30 min, spun down, and fixative was replaced twice. Cells were then resuspended in an appropriate volume of fresh fixative and cells were dropped onto warmed glass slides. Spreads were hardened for 5 days at room temperature and then Telo-FISH was carried out as above. Fragile telomeres were scored when multiple telomeric signals were seen that were spatially separated from chromatid ends, as in (8 (link)).
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2

Metaphase Chromosome Preparation Protocol

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Metaphase chromosomes were prepared as described elsewhere [14 (link)]. Cells were treated with KaryoMAX colcemid (Gibco; Cat# 15212012) at a final concentration of 75 ng/mL for 20 min to arrest cells in metaphase. Cells then were washed with PBS without Ca2+ and Mg2+ (Gibco; Cat# 14190250), followed by trypsin treatment to dislodge adherent cells, and centrifuged at 1000 rpm at room temperature. The supernatant was removed, and the cell pellet was gently resuspended in prewarmed hypotonic solution (75 mM KCl; Gibco; Cat# 10575090). Cells then were incubated in a 37°C water bath for 15 min. After hypotonic treatment, cells were fixed by gently adding 500 μL of acetomethanol fixative (3:1, methanol: acetic acid) with gentle and thorough agitation. After centrifugation for 10 min at 1000 rpm, the cell pellet was gently resuspended in 2 mL of supernatant and fixative was added in a dropwise manner with constant agitation for a total of 4 mL. An additional 4 mL of fixative was added and the cells were allowed to rest at room temperature for 20 min. After two additional washes with fixative solution, cells were dropped onto pre-cleaned glass slides at 20–25 °C with 42–45% humidity to obtain optimum spreading of metaphase chromosomes.
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3

Fosmid-based Cytogenetic Analysis of Adam10

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Fosmid clones for detection of Adam10 (WI1-600D17) were selected using UCSC Genome Browser online tool (University of California, Santa Cruz, USA), and obtained from BACPAC Resources (Children's Hospital Research Institute, Oakland, USA). mCCDcl1 cells were cultured until confluency, treated for 10 min at 37°C with colcemid (KaryoMAX Colcemid, Gibco), trypsinized and burst (10 min at 37°C) using a hypotonic solution (KCl and sodium citrate). The cell nuclei were then fixed using a 3:1 methanol/acetic acid solution and dropped on microscope slides. FISH analysis was conducted as previously described.22 (link)
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4

Karyotyping of iPSCs Using Colcemid

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MUi027-A iPSCs were seeded on a Matrigel-coated 6-well plate and allowed to grow until they reached 80% confluence. Cells were treated with 10 μg/mL KaryoMAX colcemid (Gibco) for 2 h before being harvested by incubation with 0.25% trypsin-EDTA (Gibco, Waltham, MA, USA). The cells pellet was washed once with PBS (HyClone, UT, USA) and incubated with 0.56% KCL for 15 min at 37 °C, then the cell pellet was resuspended in a fixative solution (3:1 v/v methanol/glacial acetic acid). The fixed cells were dropped onto a glass slide and air-dried. Karyotyping was performed on G-banded metaphase chromosomes using standard cytogenetic procedures. The result was examined and analyzed by Genetic Laboratory, Institute of Molecular Biosciences, Mahidol University.
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5

Karyotyping of Induced Pluripotent Stem Cells

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iPSCs were treated for about 45 minutes with Karyo
MAX Colcemid (Gibco, USA), harvested, and fixed
with methanol:acetic acid (3:1). The cell pellet was
washed, resuspended, dropped on a slide, and dried
on a hotplate. Cells were stained with Giemsa and
the metaphase chromosome number from individual
nuclei were counted microscopically (Olympus BX51,
Japan, 100X), imaged by CytoVision software, and
subjected for G-band karyotyping at Xinxiang Medical
University. Karyotypes were described according
to the International System for Human Cytogenetic
Nomenclature (ISCN) (19 (link)).
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6

Detecting EWSR1-FLI1 Translocation in Cells

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Fresh cells with few passages were harvested after 1-6 hours with 10μl/mL of KaryoMAX colcemid (Gibco) treatment, resuspended in 0.075M KCl at 37 °C for 30 minutes and fixed in methanol/acetic acid (3:1). Cells were dropped onto glass slides and dried. FISH was performed on the metaphases using EWSR1 and FLI1 probes (LPS007, Cytocell) to detect the t(11;22) chromosomal translocation. Cell images were captured with the Zeiss Spinning Disk Confocal microscopy 63x. Alternatively, for multicolor FISH imaging metaphase spreads were stained with 24XCyte, Multicolor Painting mFISH Probe Kit (MetaSystems), which was prepared following supplier’s instructions. Metaphases were imaged using a ZEISS AxioImager.Z2 microscope and the Metafer automated capture system (MetaSystems). Karyotyping was performed using Isis software (MetaSystems). For conventional karyotypes, metaphase spreads, R-banded chromosomes were analyzed by standard procedures.
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7

Karyotyping Organoids via Colcemid

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Karyotyping was performed as previously described 24 (link). Briefly, cultures were incubated with 0.1ug/ml Karyomax Colcemid (Gibco). After 24 hours, organoids were harvested and dissociated using TrypLE (Gibco). Cells were incubated with KCL 0.0075M hypotonic solution for 10 min, fixed in methanol:acetic acid (3:1) and dropped on a microscope slide for visualization. Nuclei were mounted and stained using Vectashield with DAPI (Vector Labs). A minimum of 15 metaphases per sample were counted.
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8

Chromosomal Analysis via Metaphase Spread

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Cell cultures were arrested in metaphase by incubation with KaryoMAX Colcemid (Gibco; 0.1 mg/mL). Cells were treated with a hypotonic solution (0.075 M KCl in ddH2O; Merck) for 30 min at 37 °C and were then fixed with Carnoy’s solution (methanol and acetic acid 3:1; Sigma-Aldrich). For GTG banding, slides were trypsinized (ThermoFisher Scientific) and stained with Giemsa (ThermoFisher Scientific). Metaphase spreads were analyzed on a Zeiss Axioplan microscope with Ikaros v5.20 karyotyping platform (Metasystems GmbH). Between 40 and 100 metaphases were analyzed.
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9

Metaphase Chromosome Preparation and Imaging

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Cells were cultured until about 70% confluence, treated with KARYOMAX Colcemid (120 ng/ml; Gibco, 15212-012) for 2 hours. Cells were then digested with 0.05% trypsin-EDTA (Invitrogen, 25200072), resuspended with hypotonic buffer [10 mM tris-HCl (pH 7.4), 40 mM glycerol, 20 mM NaCl, 1.0 mM CaCl2, and 0.5 mM MgCl2] for 15 min at 37°C to swell the cells, followed by fixation with methanol/glacial acetic acid (3:1) for 30 min. Cells were dropped onto ice-cold wet glass slides, air-dried, incubated at 37°C for 24 hours, and stained with 3% Giemsa solution (Gibco, 10092013) at pH 6.8 for 10 min. Images were captured using a Leica TCS SP5 confocal microscope system (Leica Microsystems). At least 50 metaphases were analyzed in three independent replications.
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10

Karyotyping of Mouse Embryonic Stem Cells

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ESC were cultured on mitotically inactivated mouse embryonic fibroblasts feeder layers and subsequently cultured on feeder-free 0.1% geletin-treated dishes prior to being treated with 10 uL/mL Karyo-MAX colcemid (Gibco) for 60 minutes. ESC were washed with PBS, trypsinized, and harvested. ESC pellets were resuspended in hypotonic solution (75 mM KCl) for 7 minutes at 37°C, followed by fixation with Carnoy’s solution (3 volumes of methanol to 1 volume of acetic acid) for 30 minutes. Fixed cells were concentrated and dropped onto an angled, humidified microscope slide. The slide was washed with 1 mL of fixation solution to clean up the debris and subsequently dried. The chromosomes were stained with Hoechst dye (1:1,000 dilution) for 60 minutes at room temperature in the dark and imaged with an Olympus fluorescence microscope.
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