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Trypsin ethylenediaminetetraacetic acid

Manufactured by Thermo Fisher Scientific
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Trypsin-ethylenediaminetetraacetic acid is a laboratory reagent used in cell culture applications. It functions as a proteolytic enzyme that breaks down proteins, facilitating the detachment of adherent cells from the culture surface. Ethylenediaminetetraacetic acid (EDTA) is included as a chelating agent to remove divalent cations that are necessary for cell-cell and cell-substrate adhesion.

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159 protocols using trypsin ethylenediaminetetraacetic acid

1

Cholesterol Metabolism Regulation Assay

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Dulbecco’s modified eagle medium (DMEM-F12), fetal bovine serum (FBS), penicillin and streptomycin solution, and trypsin-ethylenediaminetetra acetic acid were purchased from Life Technologies (Eugene, OR, USA). Phosphate buffered saline (PBS) was obtained from Biochrom AG (Berlin, Germany). HMG-CoA reductase assay kit was purchased from Sigma Chemical Co. (St. Louis, MO, USA). (1α,2α(n)-3H) Cholesterol (specific activity, 49 Ci/mmol) was purchased from Perkin-Elmer (Wellesley, MA, USA). NPC1L1 antibody was bought from Novus Biologicals (Littleton, CO, USA). Ezetimibe was purchased from Schering-Plough Research Institute (Kenilworth, NJ, USA). Folin-Ciocalteu reagent, sodium bicarbonate, 1,2-di-O-lauryl-rac-glycero-3-glutaric acid 6’-methylresorufin ester, taurocholic acid sodium salt hydrate, glycodeoxycholic acid, taurodeoxycholic acid, and hydrazine hydrate solution were received from Sigma-Aldrich Co. (St. Louis, MO, USA). All other chemical reagents used in this study were obtained from commercial sources.
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2

Culturing Human Osteosarcoma and Synovial Sarcoma Cell Lines

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Human osteosarcoma cell lines SaOS-2 were obtained from Dr. Massimo Serra’s Laboratory (IRCCS Istituto Ortopedico Rizzoli, Bologna, Italy) and cultured in Dulbecco’s Modified Eagle Media supplemented with 10% heat-inactivated fetal bovine serum (FBS; Sigma Aldrich, St. Louis, USA), 2 mM L-glutamine, 100 U/ml penicillin, and 100 µg/ml streptomycin (all from MP Biomedicals, Milan, Italy) at 37°C humidified atmosphere with 5% CO2. Human synovial sarcoma cell line SYO-1, bearing the pathogenetic translocation (X;18)(p11.2;q11.2), was obtained from Dr Akira Kawai (National Cancer Center, Tokyo, Japan) and Dr. Aki Yoshida Laboratories (Okayama University, Tokyo, Japan) and cultured in Iscove’s Modified Dulbecco’s Media supplemented with 10% heat-inactivated FBS (Sigma Aldrich), 2 mM L-glutamine, 100 U/ml penicillin, and 100 µg/ml streptomycin (all from MP Biomedicals) at 37°C humidified atmosphere with 5% CO2. The cells were split twice a week. Before cell treatment or usage, SaOS-2 and SYO-1 were removed from culture flasks using 0.05% trypsin-ethylenediamine tetraacetic acid (Life Technologies, Waltham, USA) and washed in PBS. After cell-counting, the cells were resuspended in PBS or cell culture medium.
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3

Optimizing PLGA-based Paclitaxel Delivery

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Resomer RG 503 was used as a commercial source of PLGA (Boehringer, Rhein Ingelheim, Germany) with a 50:50 lactide to glycolide ratio and a molecular weight of 33,000 Da. Dimethyl sulfoxide (DMSO), PTX, and 1,1,1,3,3,3-hexafluoro-2-propanol (HFIP) solvents were purchased from Sigma-Aldrich Co. (St. Louis, MO, USA).
Fetal bovine serum, antibiotics (penicillin-streptomycin), trypsin-ethylenediaminetetraacetic acid, trypan blue stain, and all medium additives were obtained from Life Technologies (Gaithersburg, MD, USA). An enhanced chemiluminescence kit was purchased from Amersham (Arlington Heights, IL, USA). An anti-CD31 antibody (sc-376764) was acquired from Santa Cruz Biotechnology (Santa Cruz, CA, USA). Antibodies specific for cleaved-PARP (#5625), PCNA (#2586) and Ki-67 (#9027) were obtained from Cell Signaling Technology (Danvers, MA, USA).
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4

Phenotypic Characterization of Canine BMSCs

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Phenotypic characterization of canine BMSCs was performed as described.18 Adherent cells were dissociated with 0.05% trypsin‐ethylenediaminetetraacetic acid (Life Technologies) and resuspended in DMEM containing 10% fetal bovine serum. The cells were washed once with phosphate‐buffered saline (Life Technologies), and after centrifugation the phosphate‐buffered saline was removed and replaced with phosphate‐buffered saline containing 2% canine serum (AbD Serotec, Oxford, UK). The cells were placed on ice for 20 minutes, followed by incubation for a further 20 minutes on ice with monoclonal antibodies against cluster of differentiation 11b (CD11b; AbD Serotec), CD29‐PE (Abcam, Cambridge, UK), CD44‐APC (Biolegend, San Diego, CA), CD45‐eFlour (ebioscience, San Diego, CA), and CD90‐APC (ebioscience). The CD11b antibody was detected using goat polyclonal secondary antibody to mouse immunoglobulin G heavy and light chains (DyLight 488; Abcam). Isotype‐identical antibodies were used as controls. Flow‐cytometric analyses were performed using the Gallios system (Beckman Coulter, Danvers, MA). Propidium iodide (Sigma‐Aldrich, St. Louis, MO) was used to exclude dead cells from analyses. Each sample was assessed at least in triplicate. Data were analyzed using Kaluza software (Beckman Coulter).
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5

Porcine Muscle Satellite Cell Isolation

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Before starting the isolation of porcine muscle satellite cells, the following reagents need to be purchased, including Dulbecco’s Modified Eagle Medium, high glucose (DMEM-HG) (Invitrogen, Grand Island, USA. cat. no. 11995-065), fetal bovine serum (FBS) (Invitrogen, Carlshad, CA, USA. cat. no. 12664-025), horse serum (HS) (Invitrogen, New Zealand, cat. no. 26050-070), 2-[4-(2-hydroxyethyl)-1-piperazine]-1-ethanesulfonic acid buffer (HEPES buffer, 1 M) (Life Technologies, Grand Island, NY, USA. cat. no. 15630106), Phosphate-buffered saline (PBS) (Life Technologies, Grand Island, NY, USA. cat. no. 10010-023), 0.25% Trypsin-ethylenediaminetetraacetic acid (Life Technologies, NY, Grand Island, USA. cat. no. 25200056), Protease from Streptomyces griseus (Sigma, St. Louis, MO, USA. cat. no. P8811, 3.5 U/mg); Collagenase from Clostridium histolyticum (Sigma, St. Louis, MO, USA. cat. no. C7657), 100×Penicillin-Streptomycin (10,000 U/mL) (Invitrogen, Carlsbad, CA, USA. cat. no. 15140-122) and 100% ethanol (GB 678-2002, Beijing, China).
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6

HIV Env Entry Assay in Dendritic Cells

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Monocyte-derived DC from healthy donors were cultured and induced to maturation as described [24 (link),32 (link)]. Purity of DC was always ≥99%. Tat-mediated Env entry in monocyte-derived DC was assessed as described [32 (link)]. Briefly, sera were diluted 1:30 in phosphate buffered saline and incubated for 60 min at 37°C with trimeric Env (0.4 μM) previously premixed for 10 min at 25°C with Tat (0.4 μM) or degassed PBS (control). Samples were then added to DC (2×105 cells/mL) to a 1:5 final dilution and incubated for 10 min at 37°C. Cells were then washed with cold medium and treated for 10 min at 37°C with trypsin-ethylenediaminetetraacetic acid (Life Technologies, Paisley, UK) to remove any externally bound protein. After fixation and permeabilization, DC were stained with rabbit anti-gp120 polyclonal Abs (Chem Progress, Milan, Italy) or purified rabbit IgG control Abs (Sigma-Aldrich, Milan, Italy), followed by FITC-conjugated anti-rabbit Ig (Pierce, Rockford, IL, US). Fluorescence was analyzed by flow cytometry, and results expressed as the percentage of Env positive cells as compared to isotype stained samples. A pool of sera from six healthy donors and a monoclonal Ab against Tat (mAb 2A4.1, obtained from the AIDS Research and Reference Reagent Program, Division of AIDS, NIAID, NIH) were used as negative and positive controls, respectively.
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7

Relative BDKRB1/Bdkrb1 mRNA Expression Quantification

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The skin tissues were treated with RNAlater, (Life Technologies, Carlsbad, CA, USA) followed by liquid nitrogen refrigeration were collected. The cultured cells were digested by 0.25 % trypsin-ethylene diaminetetraacetic acid (Life Technologies) and washed twice with PBS before homogenizing. Total RNA was extracted using TRIzol (Life Technologies) according to the manufacturer’s instructions. Relative BDKRB1/Bdkrb1 mRNA expression levels were analyzed by qRT-PCR with double-stranded, DNA-binding dyes as reporters, using GoTaq qPCR Master Mix (Promega, Madison, WI, USA). Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) mRNA expression was used as the internal reference. RT-PCR primers were: Bdkrb1 forward: 5’-CCCAACTACAGTTGTGAACGC-3’, Bdkrb1reverse: 5’-AGGATGATGCCATGCACAGT-3’; Gapdh forward: 5’-CTCCTCCTGTTCGACAGTCAGC-3’; Gapdh reverse: 5’-CCCAATACGACCAAATCCGTT-3’; BDKRB1 forward: 5’-GGCAGCTTCTGATCTGGTGT-3’, BDKRB1 reverse: 5’-GTAGCGGTCCTGACTGATGG-3’; GAPDH forward: 5’-GTGTTCCTACCCCCAATGTGT-3’; GAPDH reverse: 5’-TGAAGTCGCAGGAGACAACC-3’.
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8

Cell Cycle and Apoptosis Analysis

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Hep3B and HepJ5 cells were seeded as 5 × 105 cells per 6 cm dish, incubated overnight, and then treated with 1 or 2 mg/mL TCEE, respectively, for 24 hr. After treatment, cells were washed by phosphate buffered saline (PBS) and harvested by 0.05% trypsin-ethylenediaminetetraacetic acid (Life Technologies, Carlsbad, CA, USA). Cell pellets were collected by centrifuge and resuspended in 1 mL PBS with 4 mL 75% ethanol in −20°C overnight for cell fixation. Fixed cells were centrifuged and washed by 5 mL PBS in room temperature. Before analysis, cell suspensions were mixed with 1 mL propidium iodide buffer alone (RNase A 0.2 mg/mL, triton X-100 0.1%, and 20 μg/mL propidium iodide, PI) or in combination with the FITC-labelled annexin V binding buffer (Invitrogen, Life Technologies, Carlsbad, CA, USA) in room temperature for 15 min staining. Stained cells were finally measured by the FACScan flow cytometer (BD Biosciences, CA, USA) and analyzed by the CellQuest software (BD Biosciences, CA, USA).
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9

Lipid-Based Nanoparticle Characterization

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1,2-Hydrogenated-L-α-phosphatidylcholine (HSPC) was from Northern Lipids Inc, Vancouver, Canadá. CUR, cholesterol (Chol), Tween 80, (6-Dodecanoyl-N,N-dimethyl-2-naphthylamine (Laurdan), 3-(4,5-dimetiltiazol-2-yl)-2,5-diphenyl tetrazolium bromide (MTT), phorbol 12-13-acetate (PMA), Mowiol, 2-mercaptoethanol, lipopolysaccharide (LPS) and dexamethasone 21-phosphate disodium salt (DEX) were from Sigma-Aldrich (MO, USA). Hoechst 33342, CellMask Deep Red Plasma membrane stain, 5-(and-6)-chloromethyl-2′,7′-dichlorodihydrofluorescein diacetate, acetyl ester (carboxy-H2DCFDA), Lucifer Yellow (LY), Roswell Park Memorial Institute 1640 (RPMI), Modified Eagle Medium (MEM), penicillin-streptomycin sulphate, glutamine, sodium pyruvate and trypsin/ethylenediamine tetra acetic acid were from Life Technologies (NY, USA), fetal bovine serum (FBS) was from Internegocios (Buenos Aires, Argentina). The other reagents were of analytic grade from Anedra, Research AG (Buenos Aires, Argentina).
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10

Cell Adaptability to Metallic Vessels

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MCF-7 (RIKEN BRC, Saitama, Japan) and NHDF cells (Cosmo Bio Co., Ltd., Tokyo, Japan) were cultured in Dulbecco’s modified Eagle’s medium (11965092; Thermo Fisher Scientific Inc.) supplemented with 10% fetal bovine serum (Funakoshi Co., Ltd., Tokyo, Japan) and 1% penicillin (15140122; Thermo Fisher Scientific Inc.) at 37 °C under 5% CO2. Cells were detached using 0.05% trypsin-ethylenediaminetetraacetic acid (25300; Life Technologies, Carlsbad, CA, USA). Except for the experiments, the cells were cultured in conventional plastic culture dishes.
To demonstrate the cell adaptability (Fig. 2E to H), 1.0 × 106 cells were seeded into the metallic culture vessels and cultured for 24 h, while cells with the same density on culture surfaces were seeded and cultured in 35-mm plastic culture dishes. After culturing, the supernatant was collected to count the number of cells detached from the culture surface. To measure cell viability, live and dead cells were stained with calcein-AM and propidium iodide, respectively. The ratios of live-cell areas were used to determine cell viability.
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