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Lipophilic tracers

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Lipophilic Tracers are a class of fluorescent dyes used to label and track lipid-rich cellular structures and membranes. They function by selectively partitioning into lipid-rich environments, allowing visualization and monitoring of lipid dynamics within living cells.

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7 protocols using lipophilic tracers

1

Isolation and Analysis of Tumor-Infiltrating Cells

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All biotinylated and fluorescent antibodies, human CD138 microbeads, and Pan T Cell Isolation Kits were purchased from Miltenyi Biotec (Bergisch Gladbach, Germany). DMEM, RPMI-1640, L-glutamine, penicillin-streptomycin, and phosphate buffered saline (PBS) were purchased from Corning (Corning, NY). Fetal bovine serum, live-cell dyes, lipophilic tracers, collagenase, and counting beads were purchased from Life Technologies (Carlsbad, CA). 1,2-dipalmitoyl-sn- glycero-3-phosphocholine (DPPC), 1,2-distearoyl-sn-glycero-3-phosphoethanolamine-N- [amino(polyethylene glycol)-2000] (DSPE-PEG2000), and polycarbonate membranes were purchased from Avanti Polar Lipids (Alabaster, AL). Cholesterol and chloroform were purchased from Millipore Sigma (Burlington, MA). Streptavidin conjugation kit was purchased from Abcam (Cambridge, United Kingdom). Human Cytokine Array Q1 was purchased from Raybiotech (Peachtree Corners, GA). All mice used in this study were NCG (strain: 572), female, 50–56 days old, and purchased from Charles River (Wilmington, MA). All mice experiments in this study was in compliance with the Institutional Animal Care and Use Committee at Washington University.
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2

Isolation and Characterization of Immune Cells

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All biotinylated and fluorescent antibodies, human CD138 microbeads, and Pan T Cell Isolation Kits were purchased from Miltenyi Biotec (Bergisch Gladbach, Germany). DMEM, RPMI-1640, L-glutamine, penicillin–streptomycin, and phosphate buffered saline (PBS) were purchased from Corning (Corning, NY). Fetal bovine serum, live-cell dyes, lipophilic tracers, collagenase, and counting beads were purchased from Life Technologies (Carlsbad, CA). 1,2-dipalmitoyl-sn- glycero-3-phosphocholine (DPPC), 1,2-distearoyl-sn-glycero-3-phosphoethanolamine-N- [amino(polyethylene glycol)-2000] (DSPE-PEG2000), and polycarbonate membranes were purchased from Avanti Polar Lipids (Alabaster, AL). Cholesterol and chloroform were purchased from Millipore Sigma (Burlington, MA). Streptavidin conjugation kit was purchased from Abcam (Cambridge, UK). Human Cytokine Array Q1 was purchased from RayBiotech (Peachtree Corners, GA). All mice used in this study were NCG (strain: 572), female, 50–56 days old, and purchased from Charles River (Wilmington, MA). All mice experiments in this study were in compliance with the Institutional Animal Care and Use Committee at Washington University.
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3

Isolation and Characterization of Immune Cells

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Antibodies and Pan T Cell Isolation Kits were purchased from Miltenyi Biotec (Bergisch Gladbach, Germany). RPMI-1640, 0.25% trypsin, L-glutamine, and penicillin-streptomycin were purchased from Corning (Corning, NY). Fetal bovine serum, lipophilic tracers, collagenase, and counting beads were purchased from Life Technologies (Carlsbad, CA). 1,2-dipalmitoyl-sn- glycero-3-phosphocholine (DPPC), 1,2-distearoyl-sn-glycero-3-phosphoethanolamine-N- [amino(polyethylene glycol)-2000] (DSPE-PEG2000), and extrusion membranes were purchased from Avanti Polar Lipids (Alabaster, AL). Cholesterol was purchased from Millipore Sigma (Burlington, MA). Streptavidin conjugation kit was purchased from Abcam (Cambridge, United Kingdom). Lipophilic tracer DiO was purchased from Invitrogen (Eugene, OR).
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4

Labeling and Tracing of Stem Cell-Derived Extracellular Vesicles

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Pan PPAR-iMSC-EVs were incubated with 1 μg/mL DiR buffer for 10 min at 37 °C according to the protocol mentioned by Lipophilic Tracers (Invitrogen, Waltham, MA, USA). Next, the DiR-labeled pan PPAR-iMSC-EVs were centrifuged for 80 min at 100,000×g and 4 °C and washed with PBS (Gibco). Lastly, 200 or 400 μg of DiR-labeled pan PPAR-iMSC-EVs was resuspended in 0.1 mL of PBS and intravenously injected into C56BL/6 mice. At 24 h, DiR-labeled pan PPAR-iMSC-EVs were detected using an In Vivo Imaging System (Caliper Life Sciences, Waltham, MA, USA) at excitation and emission wavelengths of 740 and 790 nm, respectively. The intensity of the region of interest was plotted in units of the maximum number of photons per second per centimeter square per steradian (p/s/cm2/sr). The procedure for preparing DiD-labeled pan PPAR-iMSC-EVs was identical to the procedure described above. DiD-labeled pan PPAR-iMSC-EVs were used to treat the human primary hepatocytes or THP-1 macrophages for 24 h with or without each stimulus. At 24 h, DiD-labeled pan PPAR-iMSC-EVs were observed under a Nikon Eclipse Ti2-U fluorescent microscope (Nikon, Tokyo, Japan).
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5

Visualizing Exosome Trafficking with Fluorescent Lipophilic Dyes

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A stock solution of the lipophilic tracers (Invitrogen, Carlsbad, CA, USA) DiI (red fluorescence; Ex565 nm, Em594 nm) and DiO (green fluorescence; Ex484 nm, Em501 nm) were prepared in ethanol and DMSO. Exosomes isolated from culture medium were incubated with DiO and DiI (1 μM) dye for 30 min at 37°C. Exosomes were then washed with PBS and purified using ExoQuick™. Fluorescently labeled exosomes (20 μg/mL) were used to treat tumor cells (4T1), endothelial cells (SVEC), macrophages (Raw264.7), stem cells (mBs-MSC), fibroblasts (3T3), and dentritic cells (JAWS2). Fluorescent exosomes in cells were detected using a Zeiss LSM510 META confocal imaging system (Carl Zeiss, Thornwood, CA, USA). We also constructed a pCMV driven GFP/RFP-tagged CD9 vector and imaged exosomes with confocal microscopy.
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6

Tracking IFN-γ-iMSC-EVs Biodistribution

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IFN-γ-iMSC-EVs were incubated with 1 μg/mL DiR buffer for 10 min at 37 °C according to the protocol mentioned by Lipophilic Tracers (Invitrogen, Waltham, MA, USA). Next, the DiR-labeled IFN-γ-iMSC-EVs were centrifuged for 80 min at 100,000×g and 4 °C and washed with PBS (Gibco). Lastly, 100 μg of DiR-labeled IFN-γ-iMSC-EVs were resuspended in 0.2 mL of PBS and subcutaneously injected into DNCB-induced NC/Nga mice. After 8 h, DiR-labeled IFN-γ-iMSC-EVs were detected using an In Vivo Imaging System (Caliper Life Sciences, Waltham, MA, USA) at excitation and emission wavelengths of 740 and 790 nm, respectively. The intensity of the region of interest was plotted in units of the maximum number of photons per second per centimeter square per steradian (p/s/cm2/sr).
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7

Tracking HA-iMSC-EVs Biodistribution

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HA-iMSC-EVs were incubated with 1 μg/mL DiR or DiD buffer according to the protocol provided by Lipophilic Tracers (Invitrogen, Waltham, MA, USA) as described previously [34 (link)]. 500 μg of DiR-labeled HA-iMSC-EVs were resuspended in 0.05 mL of phosphate buffered saline (PBS) and intravenously or intramyocardially injected into rats. DiR-labeled HA-iMSC-EVs were detected at 6 and 24 h using an In Vivo Imaging System (IVIS, Perkin Elmer, Waltham, MA, USA). Human umbilical venous endothelial cells (HUVECs) or neonatal rat cardiac fibroblasts (NRCFs) were treated with DiD-labeled HA-iMSC-EVs. After 24 h, DiD-labeled HA-iMSC-EVs were observed under a Nikon Eclipse Ti2-U fluorescence microscope (Nikon, Tokyo, Japan).
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