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Flow cytometry

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Flow cytometry is a laboratory technique that uses a beam of light to analyze and count particles, such as cells, within a fluid sample. It measures multiple physical characteristics of a particle, including its size, granularity, and fluorescence intensity. This information can be used to identify and quantify different cell types within a heterogeneous population.

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95 protocols using flow cytometry

1

Quantification of CSC Phenotype and Apoptosis

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Cells were suspended in PBS and incubated with anti-CD44 (APC-conjugated, BD PharMingen, San Jose, CA, USA) and anti-CD133 (PE-conjugated, Miltenyi Biotec, San Diego, CA, USA). Positive-staining cells were analyzed by Flow cytometry (Millipore, Temecula, CA, USA). To evaluate cell apoptosis, cells were collected and washed twice with PBS while spinning at 1000 r.p.m. for 10 min. Cell pellets were resuspended in a FITC-labeled Annexin V and propidium iodide (PI) staining solution (Annexin V-FITC Apoptosis Detection Kit, KeyGEN BioTECH, Jiangsu, China) and incubated for 15 min at room temperature. The apoptotic cells were then analyzed by Flow cytometry (Millipore).
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2

Apoptosis and Cell Cycle Analysis

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PANC-1 and SW1990 cells were inoculated into 6-well plates (2 mL/well) for 5 days.
For apoptosis analysis, the cell precipitates were successively washed by precooled D-hanks (pH = 7.2~7.4) and 1×binding buffer (eBioscience), resuspended by 200 μL 1× binding buffer, stained with 10 μL Annexin V-APC (eBioscience) at room temperature in the dark for 15 min and detected by flow cytometry (Millipore). For cell cycle analysis, the cells were centrifuged for 5 min, the cell precipitates were eluted with precooled PBS (pH = 7.2~7.4), fixed with 70% ethanol for at least 1 h, stained with PI (Sigma) and monitored by flow cytometry.
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3

Cell Cycle Analysis by PI Staining

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PI staining was used to detect the cell cycle. The cells were washed with cold D-Hanks solution (4°C) and fixed with cold 75% ethanol (4°C) for 12h. After being washed with cold D-Hanks solution again, the cells were suspended with cell staining solution 1mL. The formulation of the staining solution was as follows: 40 × PI mother solution (2mg/mL, Sigma, USA): 100 × RNase mother solution (10 mg/mL, Fermentas, MD, USA): 1 × D-Hanks = 25:10:1000. After incubation in the dark for 30 min at 4°C, the percentages of the stained cells in each phase were measured by flow cytometry (Millipore, MA, USA).
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4

Evaluating Luteolin's Antiapoptotic Effects

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The Annexin V FITC apoptotic detection kit was applied for apoptotic cells detection according to the supplier’s instructions. SH-SY5Y cells were seeded at a density of 1 × 106 cells/dish onto a 35-mm dish for 24 h. The cells were pre-incubated with 20 µM luteolin for 1 h. After treatment with 100 µM MPP+ for 24 h, the cells were stained with 100 µL Annexin V/7-ADD solution, and incubated at room temperature for 20 min in the dark. The number of apoptotic cells was analyzed using a flow cytometry (Millipore, Burlington, MA, USA).
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5

Murine Splenocyte Immunophenotyping

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As previously reported, single-cell suspensions were obtained on day 41 by density gradient centrifugation from the mouse spleen tissue suspension [45 (link)]. The cells were labeled with anti-CD3, anti-CD4, anti-CD19, anti-Foxp3, anti-FcεRI, and anti-c-KIT on the surface. Intracellular expression markers were stained with Foxp3-PerCP-Cy5.5 after fixing and permeabilizing as described in the protocol. The cells were gated and demonstrated by flow cytometry(Millipore, Billerica, MA, USA), and data were analyzed with a Guava easyCyte 6-2L system using Guava Soft 3.1.1 software.
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6

Quantifying Cell Apoptosis by Flow Cytometry

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flow cytometry was performed to detect cell apoptosis. The transfected cells were cultured on a 6-well plate until the cells covered more than 70% of the well, then apoptosis kit was used to detect apoptosis. Briefly, the cells were digested with trypsin to obtain the cell suspension, and collected with the cell supernatant in a 5ml centrifuge tube. After centrifuging for 5 min, precipitated cells were collected and centrifugated again for 3 min. Then 200 uL 1×binding buffer and 10 um Annexin V-APC staining was added, and the cell apoptosis was detected by flow cytometry (Millipore) after 15 min at room temperature in dark.
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7

Cell Cycle Analysis by Flow Cytometry

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Cells were harvested with trypsin when they have grown to a coverage rate of about 80%. After centrifuging at 1300 rpm for 5 min, the cells were washed by D-Hanks (pH 7.4) precooled at 4 °C and fixed in 75% ethanol precooled at 4 °C for 2 h. Then, the cells were washed with D-Hanks once again after discarding ethanol. Finally, cells were stained by the working solution (PI: RNase stock solution: D-Hanks = 25: 10: 1000) for 30 min in the dark. The cell solution was collected for cell cycle analysis by flow cytometry (Millipore, USA).
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8

Annexin V-PI Apoptosis Assay

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Analysis of apoptosis on the indicated cell lines was performed by Annexin V/propidium iodide double staining followed by Flow cytometry (Guava Technologies, Millipore, USA). The cells 2 days after transfection were collected and subjected to analysis. A minimum of 5000 cells were then analyzed by FACScan with guavaSoft 3.1.1 software (Guava Technologies, Millipore, USA) for acquisition and analysis in three independent biological replicates.
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9

Quantifying Apoptosis with Annexin V-FITC

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The cells were harvested 48 h after the transfection and washed twice using cold PBS. Then cells were re-suspended in binding buffer (BD Biosciences). Annexin V-FITC was utilized to stain the cells which were then resuspended using binding buffer (100 μL), before 5 mL of allophycocyanin-annexin V (BD Biosciences) and 50 mg/mL propidium iodide (Invitrogen) were added to it. Subsequently the cells were mixed and incubated for 15 min in the dark at room temperature. Flow cytometry (Millipore Guava) was used to detect and quantify the apoptotic cells based on the manufacturer's instructions.
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10

Apoptosis Detection in PANC-1 Cells

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Seven days after transfection, apoptosis of transfected PANC-1 cells was detected by Annexin V-APC (eBioscience, CA, USA) single staining. In brief, these cells were washed two times with complete culture medium and were incubated in 200 µl binding buffer and 10 µl Annexin V-APC at room temperature for 15 min in the dark. Then, the stained cells were analysed by flow cytometry (Millipore, MA, USA).
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