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7 protocols using cy3 labeled goat anti rabbit igg

1

Immunohistochemical Characterization of Spinal Cord

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The vertebra segments were harvested from six experimental models of each time point, post-fixed, and sectioned. The sections were blocked with 0.01 M PBS containing 3% BSA, 0.1% Triton X-100 and 10% normal goat serum for 1 h at 37 ℃, and incubated overnight at 4 ℃ with primary antibodies: GFAP (1:400, Sigma); OX42 (1:200, Abcam); MBP (1:500, CST); NeuN (1:1000, Abcam); D-DT (1:200, Abcam); S100β (1:400, Abcam); p65NF-κB (1:200, CST). Thereafter, the sections were rinsed with PBS and incubated with the Cy3-labeled goat anti-rabbit IgG (1:400, Abcam) or the Alexa Fluor 488-labeled donkey anti-mouse IgG (1:400, Abcam). Sections were observed under a fluorescence microscope (ZAISS, axio image M2).
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2

PLAGL2 Immunofluorescence Imaging

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A total of 3×105 cells were plated into the 24-well plates for 24 h at −20°C and each well was covered by a glass coverslip. Cells were fixed in 4% paraformaldehyde for 24 h at room temperature and blocked in 10% BSA for 2 h at room temperature. Cells were labeled with anti-PLAGL2 antibodies (dilution 1:100; cat. no. 139509; Abcam) at 4°C for 12 h. The following day, the cells were stained for 1 h with cy3-labeled goat anti-rabbit IgG (dilution 1:100; cat. no. KGIF010; Nanjing KeyGen Biotech Co., Ltd.) at 37°C and slides were washed three times for 5 min with PBS. Nuclei were stained with DAPI (Nanjing KeyGen Biotech Co., Ltd.) for 5 min at 37°C. PLAGL2 immunofluorescence was imaged using a Zeiss LSM 800 confocal microscope (Carl Zeiss AG, Oberkochen, Germany).
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3

Immunohistochemical Evaluation of Neuronal Markers

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After being fixed with 4% paraformaldehyde at 37°C for 24 h, brain tissue was embedded in paraffin and sectioned at a thickness of 4 µm. The slices were incubated at 50°C for 1 h and then washed with PBS. Next, blocking at 37°C was performed by addition of 10% goat serum (cat. no. 16210064; Gibco; Thermo Fisher Scientific, Inc.) for 1 h, followed by addition of mouse monoclonal antibody against rat NeuN (1:1,000; cat. no. ab104224; Abcam) and rabbit anti-rat microtubule-associated proteins 1A/1B light chain 3B (LC3B) polyclonal antibody (1:100; cat. no. ab222776; Abcam) overnight at 4°C. Next, fluorescently labeled secondary antibody (FITC-labeled goat anti mouse IgG; 1:1,000; cat. no. ab678; Abcam) and Cy3-labeled goat anti-rabbit IgG (1:500; cat. no. ab6939; Abcam) were incubated with the membrane at room tem-perature for 1 h. DAPI staining (5 µg/ml) was conducted for 5 min at 25°C, followed by fluorescence quenching agent sealing, fluorescence microscope observation with the magnification of ×400 and imaging.
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4

Immunofluorescence Analysis of Goblet Cells, Mast Cells, and KCa3.1 in Mice

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The mice were decapitated and the heads were fixed with 4% paraformaldehyde for 2 days and decalcified for 21 days in 10% ethylene diamine tetra acetic acid (EDTA).Then the samples were paraffin-embedded and serially sectioned. The sections were stained with PAS for counting goblet cell numbers, stained with toluidine blue for assessing mast cell infiltration, and stained with immunofluorescence for assessing KCa3.1 immunolabelling. Following deparaffinization and rehydration, the sections were rinsed using PBS for three times and then microwaved for antigen retrieval in EDTA buffer (PH8.0). The sections were incubated with primary antibody (rabbit anti-mouse KCa3.1, 1:100 dilution, Abcam) at 37 °C for 60 min, rinsed for three times and incubated with secondary antibody (cy3-labeled goat anti-rabbit IgG, 1:300 dilution, Abcam) for 30 min. Then, 4,6-diamidino-2-phenylindole (DAPI) was added for nuclear staining. Goblet cell, mast cell and KCa3.1 positive cell numbers were microscopically counted under high-powered field (HPF, ×400), and five fields of each section were randomly selected and mean value per HPF was calculated. All pathology slides images were reviewed independently by three blinded reviewers whose inter-interviewer variability was not statistically significant.
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5

Isolation and Characterization of PMVECs

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The collected lung tissues were cut into small pieces and grinded to obtain cell suspension. Subsequently, CD45 and CD31+ PMVECs selected by the CD45 and CD31 magnetic beads (Miltenyi Biotec, Gladbach, Germany; 10 μL beads/107 cells) were inoculated onto Dulbecco’s Modified Eagle Medium/Nutrient Mixture F-12 (DMEM/F12) medium (Biosharp, Hefei, China) supplemented with 10% fetal bovine serum (FBS) in 5% CO2 at 37℃. Immunofluorescence was used to detect the expression of CD31 and vascular endothelial cadherin (VE-cadherin) in the PMVECs. Briefly, the PMVECs were fixed in 4% paraformaldehyde (Sinoreagent, Shanghai, China) and permeabilized in 0.1% Triton X-100 (Beyotime Biotech, Shanghai, China). The PMVECs were incubated with anti-rabbit CD31 (1:100; Abclonal, Shanghai, China) and VE-cadherin (Abclonal, Shanghai, China) at 4℃ overnight. Then, the cells were incubated with Cy3-labeled goat anti-rabbit IgG (1:1000; Abcam, Cambridge, UK) at room temperature for one hour. 2-(4-amidinophenyl) 6-indolecarbamidine dihydrochloride (DAPI; Aladdin, Shanghai, China) was used for counterstaining nuclei. The images were captured using a fluorescence microscope (Olympus, Japan).
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6

Visualizing Actin Remodeling and Epithelial-Mesenchymal Transition

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SMMC-7721 cells were cultured on coverslips. FITC–phalloidin was used to probe the samples for 1 h to analyze the actin remodeling. Additional coverslips were incubated overnight at 4°C with primary antibodies (diluted 1:50) directed against E-cadherin and vimentin. After the cells were washed, they were exposed to FITC-conjugated secondary antibodies (1:1000; Invitrogen, Carlsbad, CA, M30101, L42001), and then stained with DAPI for 20 min. The coverslips were washed and mounted. All tissue samples were embedded in paraffin blocks and then sectioned. Immunofluorescence staining was performed on 6 μm paraffin sections of the tumor tissue, which was blocked with 20% goat serum and then incubated with anti-mouse vegf mAb 1/1000 (Abcam, USA), anti-mouse ctgf 1/1000 (Abcam, USA) or anti-mouse ET-1 1/1000 (Abcam, USA) at 4°C overnight. To detect the bound antibodies, CY3-labeled goat anti-rabbit IgG at 1/1000 (Abcam, USA) or FITC-labeled goat anti-mouse at 1/200 (Abcam, USA) was used at 22°C for 45 min. Nuclear staining was performed with DAPI at a 1/1000 dilution (Abcam, USA) at 22°C for 10 min. At least three sections per mouse were examined for each immunostaining condition. Images were acquired using a confocal microscope.
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7

Immunohistochemical Analysis of Spinal Cord

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The segments of spinal cord were harvested, post-fixed in 4% paraformaldehyde for 4 h, and then stored overnight at 4 °C in 0.2 M phosphate buffer. The samples were subsequently cryoprotected in 30% sucrose for 48 h. Segments were embedded in OCT (VWR International), and frozen sectioned at 10 μm. After being blocked with 0.01 M PBS containing 3% BSA, 0.1% Triton X-100, and 10% normal goat serum for 1 h at 37 °C, the sections were incubated overnight at 4 °C with primary antibodies: GFAP (1:400, Sigma); PAR1 (1:400, Novusbio). Thereafter, the sections were washed with PBS and incubated with the Cy3-labeled goat anti-rabbit IgG (1:400, Abcam) or the Alexa Fluor 488-labeled donkey anti-mouse IgG (1:400, Abcam). Sections were photographed with fluorescence microscope (ZAISS, axio image M2).
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