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6 protocols using β actin antibody

1

Western Blot Analysis of iNOS and Caspase-3

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Following protein isolation, equivalent amounts of protein were loaded onto a 10% (for inducible nitric oxide synthase (iNOS)) and 12% (for caspase-3) polyacrylamide gel for electrophoresis and blotting. After being blocked for 1 h at ambient temperature, the membrane was incubated overnight at 4°C with polyclonal anti-mouse iNOS antibody (BD Transduction Laboratories, Lexington, KY, USA) or polyclonal anti-rabbit cleaved caspase 3 antibody (Cell Signaling Technology, Danvers, CO, USA) at a 1: 1000 dilution. The blots were washed and incubated with horseradish-peroxidase-coupled secondary antibody (diluted 1∶1500; BD Transduction Laboratories, Lexington, KY, USA) for 1 h at ambient temperature. The blots were then stripped and reprobed with β-actin antibody (1∶3000; BD Transduction Laboratories, Lexington, KY, USA) as internal control. Immunoreactivity was visualized using an enhanced chemiluminescence reaction kit (Amersham Pharmacia Biotech, Buckinghamshire, UK) and quantified by scanning densitometer.
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2

Apigenin-Induced Apoptosis and Cell Cycle Arrest

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Apigenin (purity≧99%) was purchased from Extrasynthese (Genay, France); dimethylsulfoxide (DMSO), sodium dodecyl sulphate (SDS), phenylmethylsulfonyl fluoride, and bovine serum albumin (BSA) were purchased from Sigma-Aldrich Chemical Co. (St. Louis, MO, USA); the Annexin V-Alexa Fluor 488 and propidium iodide (PI) apoptosis detection kit were purchased from Invitrogen (Molecular Probe, Inc, Eugene, OR, USA). The protein assay kit was obtained from Bio-Rad Labs. (Hercules, CA, USA). Dulbecco’s phosphate-buffer saline (PBS), and trypsin-EDTA were purchased from Gibco-BRL (Gaithersburg, MD, USA). Mouse- or rabbit-monoclonal antibodies specific for cytochrome c, caspase-3, caspase-7, caspase-9, Cyclin B1, Cyclin E, and CDK2 were purchased from Santa Cruz Biotechnology (Santa Cruz, CA, USA). Mouse- or rabbit-monoclonal antibodies specific for phospho-p53, p53, p21, p27, Bcl-2, Bcl-xL, Mcl-1, Bax, Bad, Bak, poly( ADP-ribose) polymerase (PARP), Cdc2, Cdc25C, and Cyclin A were purchased from Invitrogen Corporation (Camarillo, CA, USA). β-Actin antibody was purchased from BD Transduction Laboratories (San Diego, CA, USA). The enhanced chemiluminescence (ECL) kit was purchased from Amersham Life Science (Amersham, UK).
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3

Analyzing NLRP3 Inflammasome in Macrophages

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To analyse the expression of NLRP3 inflammasome, primary PMs were incubated for 3 h after seeding in the culture plate. Macrophages were assayed in opti‐MEM media (Gibco, 31985) in the presence or the absence of trehalose or saccharin 15 min prior to LPS stimulation (Invivogen, tlrl‐eklps; 10 ng/ml) for 3 h followed by adding ATP (Sigma–Aldrich, A6419; 5 mM) for 30 min to release IL‐1β. To confirm Atg7 protein deficiency in macrophage of Atg7fl/fl or Atg7fl/fl;Lyz2‐Cre mice, PMs were harvested, seeded, incubated for 3 h, and the adherent macrophages were collected for further analysis. Human T1R3 was analysed from cell lysates obtained from THP‐1 cell line or PBMCs, as described.86 Proteins in the culture supernatant were concentrated by chloroform‐methanol precipitation, as described previously.90 Primary antibodies used were goat anti‐mouse IL‐1β antibody (R&D Systems, AF‐401‐NA; 1:1000), mouse monoclonal anti‐NLRP3 antibody (Adipogen, AG‐20B‐0014; 1:1000), mouse monoclonal anti‐caspase‐1 antibody (AdipoGen, AG‐20B‐0042; 1:1000), rabbit anti‐Atg7 antibody (Cell Signaling, 2631; 1:1000), rabbit anti‐human T1R3 (abcam, ab229015; 1:1000), and mouse antiβ‐Actin antibody (BD Biosciences, 612657; 1:5000).
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4

Lentiviral Knockdown of HDAC6 in Breast Cancer

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Puromycin-resistant, lentiviral shRNA constructs against HDAC6 or scrambled shRNA (Thermo Scientific GIPZ; Waltham, MA USA 02451) were co-transfected into Phoenix cells along with helper packaging plasmids in order to produce viruses. The jETPEI transfection reagent and protocol was used (Polyplus Transfection). Media were changed at 24 hours. Another 24 hours later, media were collected and filtered through a 0.45-μ syringe unit (BD Falcon). The breast cancer cells of interest were then transduced with the virus and selected for puromycin resistance for 48 hours and allowed to recover for another 48 hours. Protein was harvested to assess knockdown. HDAC6 antibody (rabbit polyclonal, Santa Cruz sc-11420) was used at 1:1000, for 2 hours at room temperature, and β-actin antibody (mouse, monoclonal, BD Biosciences, 558624) was used at 1:5000.
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5

Wnt Signaling Pathway Protein Analysis

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Samples were harvested at each time point into protein extraction buffer. Equal amounts of protein were denatured for 5 min at 95°C in sample buffer and separated by SDS–PAGE. Western blot analysis was performed using antibodies against Porf-2 (1:1,000; Millipore, United States), Wnt3a (1:500), Disheveled (1:1,000), Dkk-1 (1:1,000), Wif-1 (1:1,000), GSK-3β (1:1,000), p-GSK-3β (1:500), β-catenin (1:1,000), TCF (1:1,000), cyclin D1 (1:1,000), p21 (1:1,000), and β-actin (1:10,000) diluted in 10% horse serum in TBS-T buffer (0.2 M NaCl, 25 mM Tris, pH 7.5, and 0.5 ml/L Tween-20), followed by incubation with a horseradish peroxidase (HRP)-coupled mouse secondary antibody (1:10,000). Blots were re-probed with a β-actin antibody (BD Bioscience, United States). Signals were quantified with an image analyzer (UVtec, United Kingdom). Porf-2 and β-catenin signals were normalized by comparison with the corresponding β-actin signal of the samples. The data are presented as the percentages of the normalized control signal.
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6

Quantifying Protein Expression via Western Blot

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Western blot was performed to determine the protein expression level. The protein samples were denatured for 5 min at 95°C in a sample buffer and separated by SDS–PAGE. Western blot analysis was performed using antibodies against mouse monoclonal antibody-anti-human OAS3, and mouse monoclonal antibody-anti-human β-actin (Santa Cruz Biotechnology), followed by incubation with horseradish peroxidase (HRP)-coupled mouse secondary antibody (1:10,000). The blots were re-probed with a β-actin antibody (BD Bioscience, United States), and the signals were quantified using an image analyzer (UVtec, United Kingdom). The data were shown as percentages of the normalized control signal.
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