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3 protocols using gsk2141795

1

Comprehensive Immune Profiling Assays

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For flow cytometry and immunofluorescence assays, we used antibodies specific for given antigens: monoclonal antibody to VSV glycoprotein (Vi10, made in-house); CD103 (M290), CD11b (M/70) and CD16/CD32 (2.4G2) were purchased from BD Biosciences; CD103 (2E7), CD8a (53-6.7), CD11c (N418), MHC Class II (I-A/I-E) (M5/114.15.2), F4/80 (BM8), CD115 (AFS98), Ly6C (HK1.4) and Ly6G (RB6-8C5) were purchased from Thermo Fisher Scientific; IFNAR-1 (MAR1-5A3; BE0241) and isotype control IgG1 κ (MOPC-21; BE0083) were bought from Bioxcell.
Reagents used for other analysis were bought from following companies, recombinant mouse interferon alpha 4 (12115-1): PBL assay science; AKT inhibitor, GSK2141795 (HY-15965): MedChem Express; mTOR inhibitor, Rapamycin (1292): Tocris and DAPI (4’,6-diamidino-2-phenylindole, Dilactate) 2 (D3571): Thermo Fisher Scientific.
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2

EGFR and Akt Inhibitor Protocol

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Parental PC9 cells were kindly provided by F. Hoffman-La Roche Ltd (Basel, Switzerland) with the authorization of Dr. Mayumi Ono (Kyushu University, Fukuoka, Japan). Parental 11–18 cells were kindly provided by Dr. Mayumi Ono. All cell culture materials were obtained from Biological Industries (Kibbutz Beit Haemek, Israel) or Gibco Life Technologies (Carlsbad, CA, USA). Cells were cultured in a humidified atmosphere with 5% CO2 at 37 °C in RPMI1640 + 10% fetal bovine serum (FBS), 50 µg/mL penicillin-streptomycin and 2 mM l-Glutamine. EGFR inhibitors (erlotinib, gefitinib, afatinib, dacomitinib, and osimertinib (AZD9291)) and the Akt inhibitor AZD5363 were purchased from Selleck Chemicals (Houston, TX, USA). The Akt inhibitor GSK2141795 (Uprosertib) was purchased from Medchemexpress LLC (Monmouth Junction, NJ, USA). All drugs were dissolved in DMSO, aliquoted and kept at −20 °C.
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3

FGFR-Targeted Therapy in Cancer Cell Lines

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Human cancer cell lines DMS114 (small cell lung cancer; FGFR1 amplification) and RT112 (bladder cancer; FGFR3 fusion and amplification) were obtained from ATCC (Rockville, MD, USA) and CLS (Eppelheim, Germany), respectively during December 2012. All the cell lines (control and resistant) were authenticated at the University of Arizona Genetic Core facility (STR profiling) during February 2016. BGJ398 was purchased from Selleck Chemicals (Houston, TX, USA). Akt inhibitor, GSK2141795 was purchased from MedChem Express (Princeton, NJ, USA). Inhibitors were prepared as 10 mM stock solutions in dimethyl sulfoxide (DMSO). CellTiter-Glo reagent was purchased from Promega Corporation (Madison, WI, USA). Lipofectamine 2000 was obtained from Invitrogen (Carlsbad, CA, USA). Control and Akt siRNA were obtained from Cell Signaling Technology (Boston, MA, USA). Antibodies to phospho-FRS2α (y196), FGFR1, GSK3α, GSK3β, p-GSK3 α/β S9/S21, p-GSK3 β S9, p-Akt S473, p-Akt T308, pan-Akt, pMEK1/2, MEK1/2, pERK1/2, ERK1/2, pYAP-S127, YAP, TSC1, Cyclin B1, FOXM1 antibodies were obtained from Cell Signaling Technology. Antibodies against FGFR3, FRS2α, and GAPDH were obtained from Santa Cruz Biotechnology (Dallas, TX, USA). Antibodies to p-FGFR1 (y653/y654) from EMD Millipore (Billerica, MA, USA); and p-FGFR3 (y724) from Abcam (Cambridge, MA, USA) were also utilized.
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