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8 protocols using normal goat serum blocking solution

1

Immunocytochemistry of Cardiac Markers

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Cells were fixed in 4% PFA for 15 min at room temperature, blocked with 5% Normal Goat Serum blocking solution (Vector Laboratories, S-1000), and incubated with primary antibodies against atrial natriuretic peptide (ANP; Millipore, AB5490), cTNT (Thermo Scientific, MS-295-P1), cTNI (Abcam, ab47003), GFP (MBL, 598), MLC-2A (Synaptic Systems, 311-011), MLC-2V (Synaptic Systems, 310-111), or sarcomeric α-actinin (Sigma Aldrich, 111M4845). Cells were then incubated with secondary antibodies conjugated with Alexa Fluor 488 or 546, followed by DAPI (Invitrogen, D1306) counterstaining. The percentage of cells immunopositive for GFP, α-actinin, cTNT, and ANP were counted in 10–15 randomly selected fields per well in at least three independent experiments, and 2,000–4,000 cells were counted in total. The measurements and calculations were conducted in a blinded manner.
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2

Immunohistochemical Analysis of Tissue Markers

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Sections were deparaffinized, and the antigen retrieval was performed for 20 min at 98 °C in citrate buffer (10 mM, pH = 6.0). Sections were then blocked in 2.5% Normal Goat Serum Blocking Solution (Vector) for 1 h at room temperature, followed by incubation with primary antibodies (α-SMA, 1:500; Col-1, 1:400; Fibronectin, 1:200; CD31, 1:200; PCNA, 1:200; Arg1, 1:200; CD206, 1:900; iNOS, 1:50; TGFβ1, 1:100; F4/80, 1:200; LIGHT, 1:200) overnight at 4℃. For IHC, the biotinylated secondary antibody (Vector) was applied, and the signal detection was performed using diaminobenzidine (DAB) solution (Vector). For immunofluorescence, sections were incubated with FITC-conjugated secondary antibody (Invitrogen) for 1 h at room temperature. Cell nuclei were counterstained with 4′,6-diamidino-2-phenylindole (DAPI; Invitrogen).
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3

Immunofluorescence Assay for MAGOH/MAGOHB

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For immunofluorescence assays, 200,000 cells were plated on SecureSlip silicone supported coverglasses (Sigma Aldrich) in 6-well plates that had been pre-coated for 60 minutes with 0.01 mg/mL human fibronectin (Calbiochem) in PBS. The following day, cells were fixed in 4% paraformaldehyde (PFA) diluted in PBS for 15 minutes at room temperature. Cells were permeabilized with 0.2% Triton X-100 in PBS for 10 minutes. Blocking was performed in 2.5% normal goat serum blocking solution (Vector Laboratories). Cells were incubated in primary MAGOH/MAGOHB antibody (Abcam, ab38768, rabbit, 1:200) for 1 hr at RT. A Cy-3 conjugated anti-rabbit secondary (Abcam, ab97075, 1:200) and DAPI (1:1000, Life Technologies) were then used for 1 hr at RT. Cells were mounted and imaged on an Axio Observer fluorescent microscope (Zeiss) using AxioVision software (Zeiss). Nuclear/Cytoplasmic ratio was quantified by Image J. Nuclear outlines were determined based on DAPI signal. Cytoplasmic signal was defined as signal in the whole cell minus signal within the nuclear area.
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4

Investigating NOX4's Role in HKMT-Induced Autophagy

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HKMT was purchased from InvivoGen (San Diego, CA, USA). A small interfering RNA (siRNA; BioneerInc, Daejeon, Korea) against NOX4 based on the target region of the NOX4 gene (sense:5′-UCAGACAAAUGUAGACAC-3′ and antisense: 5′-AGUGUCUACAUUUGUCUG-3′; siNOX4) and scrambled siRNA (sense:5′-GGTCAAGACACTATTAACA-3′ and antisense:5′-GGATTCCTAGTGTATTTCA-3′; SiCon) were used in experiments. The mesothelial cells were treated with 10 ng/mL HKMT for the 1 h after transfection with SiCon or SiNOX4.
To assess the effect of NOX4 on HKMT-induced autophagosome formation in Met5A, LC3 puncta was measured using immunofluorescence staining. In brief, Met5Acells were fixed with 4% paraformaldehyde solution and then blocked with 2.5% normal goat serum blocking solution (Vector Laboratories, Burlingame, CA, USA) for 1 h. The samples were treated with the antibody anti-LC3 (Cell signaling Technology, USA) overnight at 4 °C, followed by treatment with secondary antibody Alex Fluor 488 donkey anti-rabbit IgG (Gibco, Grand Island, NY, USA) for 1 h at 37℃.Finally, cells were rinsed with PBS and examined under a fluorescent microscope (Olympus FV500; Olympus, Tokyo, Japan). The number of LC3 puncta was counted in four separate fields.
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5

Immunostaining for Cardiomyocyte Markers

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Immunostaining was performed as previously described [8 (link)]. Briefly, cells were fixed in 4% PFA for 15 min at room temperature, blocked with 5% Normal Goat Serum Blocking Solution (Vector Laboratories, Burlingame, CA, USA, S-1000). The following primary antibodies were used: mouse anti-cTnT (Thermo Fisher Scientific, MS-295-P1); mouse anti-sarcomeric α-actinin (Sigma Aldrich, 111M4845). Cells were then incubated with secondary antibodies conjugated with Alexa Fluor 488, followed by DAPI (Thermo Fisher Scientific, D1306) counterstaining. The numbers of cells immunopositive for cTnT and α-actinin were counted in all fields per well from at least three independent experiments. The measurements and calculations were conducted in a blinded manner.
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6

Immunohistochemical Analysis of Tau Pathology

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Mouse brains were isolated after transcardial perfusion with PBS and drop-fixed in 4% PFA overnight then subject to cryoprotection treatment in 30% sucrose in PBS for 24 h. Free-floating brain sections (35 µm) from brains sectioned in the sagittal plane were used. The sections were incubated at 4 °C overnight with primary antibody diluted in PBS containing 0.3% Triton X-100 and 5% normal goat serum blocking solution (Vector Laboratories, #S-1000). Antibodies were as follows: anti-mouse monoclonal human tau (CP27,1:1,000); pS396 and pS404 (PHF1, 1:1,000); pS202 and pT205 (CP13,1:1,000); p62 (1:1,000). GFP signal was obtained without antibody staining. Following washes, sections were incubated with goat anti-mouse IgG Alexa 594 (ThermoFisher Scientific #A-11005, 1:500). Staining was visualized by confocal microscopy, FV1200 FluoView (FV) 1200 laser-scanning confocal microscope (Olympus) and Zeiss AxioVision Imager Z1 microscope. Images were processed using FLUOVIEW software and AxioVision 4.8 image software. Quantification of the immunofluorescence signal for total and phosphorylated epitopes of tau, p62 and GFP signal was obtained by ImageJ.
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7

Quantification of Tau Pathology in Mouse Brains

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Mouse brains were isolated after transcardial perfusion with PBS, drop-fixed in 4% PFA overnight, and then subjected to cryoprotection treatment in 30% sucrose in PBS for 24 hours. Free-floating brain sections (35 μm) from brains sectioned in the sagittal plane were used. The sections were incubated at 4°C overnight with primary antibody diluted in PBS containing 0.3% Triton X-100 and 5% normal goat serum blocking solution (Vector Laboratories, #S-1000). Antibodies were as follows: anti-mouse monoclonal human tau (CP27, 1:2000); pS396 and pS404 (PHF1, 1:1000). Following washes, sections were incubated with goat anti-mouse IgG Alexa 594 (ThermoFisher Scientific #A-11005, 1:500). Staining was visualized by Zeiss Axio Vision Imager Z1 microscope. Images were processed using AxioVision 4.8 image software. We used ImageJ program to quantify tau positive neurons per area. For generation of graphs and statistical analysis, we used GraphPad Prism.
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8

Immunofluorescence Assay for MAGOH/MAGOHB

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For immunofluorescence assays, 200,000 cells were plated on SecureSlip silicone supported coverglasses (Sigma Aldrich) in 6-well plates that had been pre-coated for 60 minutes with 0.01 mg/mL human fibronectin (Calbiochem) in PBS. The following day, cells were fixed in 4% paraformaldehyde (PFA) diluted in PBS for 15 minutes at room temperature. Cells were permeabilized with 0.2% Triton X-100 in PBS for 10 minutes. Blocking was performed in 2.5% normal goat serum blocking solution (Vector Laboratories). Cells were incubated in primary MAGOH/MAGOHB antibody (Abcam, ab38768, rabbit, 1:200) for 1 hr at RT. A Cy-3 conjugated anti-rabbit secondary (Abcam, ab97075, 1:200) and DAPI (1:1000, Life Technologies) were then used for 1 hr at RT. Cells were mounted and imaged on an Axio Observer fluorescent microscope (Zeiss) using AxioVision software (Zeiss). Nuclear/Cytoplasmic ratio was quantified by Image J. Nuclear outlines were determined based on DAPI signal. Cytoplasmic signal was defined as signal in the whole cell minus signal within the nuclear area.
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