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Mpk1096

Manufactured by Thermo Fisher Scientific

The MPK1096 is a laboratory equipment designed for general laboratory use. It is a multi-purpose instrument that can perform various tasks, such as mixing, heating, and incubating samples. The core function of the MPK1096 is to provide a controlled environment for sample preparation and analysis.

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7 protocols using mpk1096

1

CRISPR/Cas9 Genome Editing in ES Cells

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TracrRNA, crRNA, and Cas9 protein were purchased from IDT (Coralville, IA, USA). TracrRNA and crRNA were dissolved in Duplex Buffer (IDT, 200 µM each) and annealed in a thermal cycler at 95 °C for 10 min followed by − 1 °C/min stepdown cycles until 25 °C. Annealed RNA (100 µM) were then incubated with 3 µg/µL Cas9 protein at 37 °C for 20 min to form Cas9-RNP. A Neon Transfection System (MPK5000, ThermoFisher) was used for electroporation of plasmid and Cas9-RNP into ES cells. In brief, 1 × 105 ES cells with 1 µg of targeting vector were electroporated with or without all-in-one CRISPR/Cas9 vector (0.5 µg) or Cas9-RNP (at a final concentration of 10 µM annealed RNA and 0.3 µg/µL Cas9 protein) in a 10 µL tip (MPK1096, Thermo). The Neon system used two pulses at 1200 V and 20 ms or a single pulse at 1400 V and 30 ms for all-in-one vector transfection or Cas9-RNP transfection, respectively. Electroporated ES cells were cultured in ESCM with or without MEFs.
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2

Cell Viability Assay with siRNA

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MT2 and C8166-45 cells (1 × 106) were transfected with 50 nM siNC, or NPM1/B23-specific siRNA-21 and siRNA-22 using the Neon® Transfection System and transfection kit (Thermofisher Scientific Inc., MPK5000 and MPK1096). Cells were next seeded into triplicate wells on 96-well plate. After 48 h, 10 μl Cell counting KIT-8 buffer (CCK-8, Sigma-Aldrich) was added into each well and incubated for 4 h at 37°C. Absorbance was measured at 450 nm with the EnSpire 2,300 Multilabel Reader (PerkinElmer) at room temperature.
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3

Episomal iPSC Generation from Fibroblasts

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1×105 fibroblasts (cultured without antibiotics for 24 hours) were electroporated with 0.5 µg iPSC episomal vector mixture(17 (link)) using a 10 µl kit neon transfection system (Thermo Fisher MPK1096) (1300V, 20ms, 2 pulses), and plated into one well of a Matrigel-coated 6-well plate. Cells were cultured in E8 media(18 (link)) plus 0.1µM hydrocortisone until confluency was ~20% (typically 5–10 days), at which point cells were cultured in E7 media (E8 without TGF-β) until PSC colonies were visible (typically 25–30 days post-electroporation). Individual colonies were picked and transferred to Matrigel-coated 24-well dishes and expanded and maintained in E8. For TSC2-shRNA transduced fibroblasts: cultures were transferred to E8 + hydrocortisone 48 hours following electroporation.
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4

Neon Transfection for U2OS Cells

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Electroporation was performed using the Neon Transfection system with the 10-μl Neon electrode tips (MPK5000; MPK1096; Thermo Fisher) according to the manufacturer’s instructions. U2OS cells were washed once with Dulbecco’s phosphate buffered saline (DPBS, 14190136; Gibco) then trypsinized (0.25% Trypsin-EDTA; 25200–056; Gibco) for 3 min at 37 °C. Cells were then resuspended in R buffer to obtain 105/10 μl cell suspension. 105 cells were mixed with 2 μl of 50 nM origami constructs and electoporated in the electrode tips using the following settings: 1550 V, 3 pulses, and 10 ms per pulse. The electroporated sample was then transferred directly into one well of an 8-well microscopy slide (Nunc Lab-Tek II for widefield imaging) containing 300 μl prewarmed medium without antibiotics and was incubated for 24 hr in 5% CO2 atmosphere at 37 °C.
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5

Optimizing Electroporation Conditions

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For electroporation, cells were dissociated to singlets as described above. For testing of electroporation conditions, cells were resuspended at a concentration of 20,000 cells/μL in Neon Buffer R, and pMax-GFP was added at 100 ng/μL of buffer. After electroporation with a 10 μL Neon tip (ThermoFisher MPK1096), cells were seeded onto a single well of a collagen-coated 24-well plate with MM + Y and allowed to recover overnight at 37°C. Media were replaced after 24 h with MM, and cells were analyzed for transfection and survival after 72 h. After optimization, all other transfections were performed using the Neon Electroporator 100 μL tips (ThermoFisher Scientific MPK10096) with preset #5 (1,700 V, 1 pulse, 20 ms), electroporating 6,000–12,000 cells/μL and plating onto a single collagen-coated well of a six-well plate. Media was changed after 24 h with MM. For transfections requiring selection, media were changed with MM + puromycin (2 μg/mL, Sigma P8833) after 72 h and every other day thereafter for 7 days. To account for experimental variability in single plasmid integration rates, the transfection efficiency for each plasmid was normalized to the efficiency of a control transfection using a constitutively expressing EGFP plasmid (Figure 4B).
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6

Isolation and Culture of Mouse Adrenal Chromaffin Cells

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Mice ACCs were prepared as described previously.[26] Briefly, the adrenal glands were isolated from anesthetized animals (25% ethyl carbamate), then the cortex was removed, cut into pieces, and digested by papain enzyme for 40 min at 37 °C under 5% CO2. The pieces were then triturated gently through a 200‐µL pipette tip. After centrifugation, the cells were plated on coverslips pre‐coated with 0.1% poly‐L‐lysine, incubated at 37 °C under 5% CO2, and used within 24–96 h. Chromaffin cells were transfected for genetic manipulations using a 10‐µL Neon electroporation system (Invitrogen, MPK1096) according to the manufacturer instruction.
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7

Sendai Virus and Episomal Reprogramming of HDFs

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A frozen stock of HDFs was thawed and cultured for four days, and then 1 × 105 cells were collected by trypsinization. With SeV, HDFs were transduced with the CytoTune-iPS 2.0 (c-MYC) or CytoTune-iPS 2.0L (MYCL) Sendai Reprogramming Kit (DV-0304, DV-0305, ID Pharma). With EpiP, HDFs were electroporated with 1.2 μg of plasmid mixtures with the Neon Transfection System (MPK1096 and MPK10096, Invitrogen). The plasmid mixtures included pCXLE-SOX2, -KLF4, -OCT3/4-shp53, -LIN28A, and pCXWB-EBNA1 with wild-type or mutant pCXLE-c-MYC or -MYCL17 (link). The mixing ratio of SOX2, KLF4, OCT3/4-shp53, LIN28A, EBNA1, and c-MYC/MYCL was 1:1:2:1:0.5:2. After that, the cells were plated in a 6-well plate and cultured in StemFit AK03N without bFGF with iMatrix-511 at 0.25 μg/cm2 in SeV or 0.125 μg/cm2 in EpiP. The culture medium was changed the next day and every three days after that. The colonies were counted 21 days after plating.
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