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50 protocols using catalase

1

Ozone Exposure Modulates Antioxidant Proteins

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Equal amounts of AM protein lysates for each set of samples from control and O3 exposure mice were separated by sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE), transferred to PVDF membrane, and the expression levels of STAT3, NF-kB-p65, FOXO1, CAT, SOD2, and GAPDH were detected by Western blotting with specific antibodies. Samples from 3 animals/treatment (control and O3) were individually analyzed and quantified relative to GAPDH expression. The antibodies utilized were obtained from the following sources: NF-kB (#8242), FOXO1 (#2880), GAPDH (#2118), STAT3 (#12640), SOD2 (#13194), and catalase (#14097) (Cell Signaling Technology, Danvers, MA).
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2

Apoptosis Detection and Analysis

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Annexin V-FITC Apoptosis Detection Kit, Phalloidin–Tetramethylrhodamine B isothiocyanate and antibody to β-actin were purchased from Sigma (USA). CMH2DCFDA and TMRM from Life Technology, (USA), Suicide Track™ DNA Ladder Isolation Kit from Calbiochem (USA), RapiGest SF Surfactant from Waters (UK). Antibodies Chop, Hsp70, caspase3, caspase7, caspase9, catalase and PARP was purchased from Cell signaling technology (USA). catalase and Peroxiredoxin3 were purchased from Abcam USA and secondary antibodies (HRP-conjugated anti-mouse and anti-rabbit were purchased from Santa Cruz biotechnology (USA).
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3

Immunoblotting for Oxidative Stress Markers

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Collected cells were lysed with RIPA protein extraction reagent (Beyotime, Beijing, China) containing a protease inhibitor cocktail (Roche, Pleasanton, CA, USA). The lysates were then loaded onto sodium dodecyl sulfate (SDS)-polyacrylamide gel electrophoresis (PAGE) gels for separation, transferred to polyvinylidene fluoride (PVDF) membranes and blocked in 5% milk prior to incubation with the indicated primary and secondary antibodies. Autoradiograms were quantified through densitometry, and GAPDH was used as a control. The antibodies against HIF-1α, FoxO1, MnSOD, catalase and Sesn3 were purchased from Cell Signaling Technology (Danvers, MA, USA).
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4

Immunoblot Analysis of Antioxidant Proteins

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For immunoblot analysis, cell lysates were prepared in 1x RIPA buffer (Thermo Scientific, Waltham, MA) with protease inhibitors (Roche Applied Science). Approximately 25 μg of total protein was analyzed by polyacrylamide gel electrophoresis (PAGE). Primary antibodies were used to detect SOD2 (Abcam; Cat #ab13533, Cambridge, MA), catalase (Cell Signaling, Cat #8841, Danvers, MA), GAPDH (Cell Signaling, Cat #2118), actin (Sigma-Aldrich, Cat #A5441, St. Louis, MO), HO-1 (Enzo Life Sciences, Cat #ADI-SPA-895, Farmingdale, NY), and OXPHOS complexes (Abcam, mouse #ab110413, human #ab13533). Immunoreactive proteins were detected using polyclonal goat anti-rabbit or anti-mouse horseradish peroxidase IgG secondary antibodies (Thermo Scientific, Waltham, MA) and visualized using Supersignal™ chemiluminescent horseradish peroxidase substrate (Thermo Scientific, MA). Densitometry analysis was performed using ImageJ analysis software (National Institutes of Health).
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5

Immunoblotting of Cellular Proteins

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Whole cell lysates for immunoblotting were prepared by dissolving cell pellets in Laemmli Sample Buffer containing 5% 2-mercaptoethanol (Bio-Rad). Antibodies used in this study are as follows: lamin A/C (MAB3211; MilliporeSigma, Burlington, MA), catalase (Cell Signaling Technology, Danvers, MA), Nrf2 (sc-722, Santa Cruz), p16 (sc-468; Santa Cruz), and β-actin (A3854; Sigma-Aldrich, USA).
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6

Western Blot Analysis of Antioxidant Proteins

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We performed Western blot analyses using both cell lines and animal tissues as previously described [3 (link)4 (link)]. The following antibodies were used: catalase, SOD, GPx, nuclear factor erythroid 2-related factor (NRF2), Bcl-2-like protein 11 (BIM), B-cell lymphoma-extra large (Bcl-xL), HRP conjugated anti-rabbit IgG, HRP conjugated anti-mouse IgG, and β-actin (All of them, Cell Signaling, Beverly, MA, USA).
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7

Quantifying Oxidative Stress Markers

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Antibodies to G6PDH (#8866), Transketolase (#8616), PHGDH (#13428), SHMT2 (#12762), Catalase (#12980), SOD1 (#4266), GPX1 (#3206), PRDX2 (#46855), GLUT1 (#12939), GLUT4 (#2213), GFAT1 (#3818), O-GlcNAc (#9875), Ribosomal protein L7a (#2415), Ribosomal protein S3 (#9538) were obtained from Cell Signaling Technology (Beverly, MA). Antibodies to HSP60 (#MA3-012), and ISPD (#PA5-25854) from Thermo Fisher (Waltham, MA); FKRP (#sc-374642), TALDO (#sc-365449) and ALDR (#sc-166918) from Santa Cruz Biotechnology (Santa Cruz, CA); Anti-4HNE (#46545) from Abcam (Cambridge, MA) and; α-Dystroglycan (IIH6C4) (#05-593) from EMD Millipore (Burlington, MA). Amersham Protran 0.45 μM nitrocellulose membrane (#10600003) and ECL Prime western blotting detection reagent (#RPN2232) from GE Healthcare Life Sciences (Germany). LI-COR Odyssey blocking buffer, IRDye 680RD Donkey anti-mouse (#926-68072) and, IRDye 800CW Donkey anti-rabbit (#926-32213) from LI-COR (Lincoln, NE). NADP/ NADPH Assay kit (#ab176724) from Abcam (Cambridge, MA) and OxyBlot Protein Oxidation Detection kit (#S7150) from Millipore Sigma (Darmstadt, Germany).
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8

Protein Expression and Regulation Analysis

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The Protein Plus Precision All Blue Standards were acquired from Bio-Rad Laboratories (Hemel Hempstead Hertfordshire, UK). The antibodies employed in this investigation were obtained from different manufacturers. The corresponding catalogue numbers from Abcam (Cambridge, USA) were as follows: pSer40 Nrf2 (no. ab76026), Nrf2 (no. ab62352), Keap1 (no. ab119403), SOD1 (no. ab16831), Sequestosome 1 (SQSTM1/p62) (no. ab56416) and SQSTM1/p62 (pSer349) (no. ab211324). The antibodies purchased from Cell Signaling Technology (Danvers, MA, USA) were: Thr287 CaMKII (no. 12716), AMPKα (no. 2532), Thr172 AMPKα (no. 2535), Catalase (no.14097) and SOD2 (no. 13141). Some secondary HRP-conjugated goat anti-rabbit (no. 111-035-144) and the HRP-conjugated goat anti-mouse (no.115-035-003) antibodies were acquired from Jackson ImmunoResearch (West Grove, PA, USA). Other secondary HRP-conjugated goat antibodies were obtained from Santa Cruz Biotechnology (Dallas, TX, USA): anti-rabbit (no. sc2004) and anti-mouse (no. sc2031). See Supplementary Table 1 for a more detailed description of the antibodies and procedures.
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9

Liver Protein Expression Analysis

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Liver homogenates containing 10 μg of whole cell lysate were separated by 10% SDS-PAGE and transferred to PVDF membranes. After blocking with 5% skim milk, the blot was probed with primary antibodies for IGFBP-3, survivin, SOCS-3, NOX4, β-actin (Santa Cruz Biotechnology, Dallas, TX, USA), Bax, Bcl-2, cleaved caspase-3, cleaved caspase-9, STAT-3, p-STAT-3, catalase (Cell Signaling Technology, Beverly, MA, USA), and NOX2 (Abcam, Cambridge Science Park, Cambridge, UK).
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10

Protein Expression Analysis in Heart Tissues

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Proteins from heart tissues or cells were extracted as previously described 18 (link). 30 μg of protein was separated by SDS-PAGE gel, transferred to PVDF membranes. After blocking with 5% non-fat milk, the membranes were incubated with primary antibodies against cytochrome c (Cell Signaling, 1:1000), CHOP (Abcam, 1:1000), catalase (Cell Signaling, 1:1000), α-SMA (Abcam, 1:1000), IκBα (Abcam, 1:1000), NF-κB (Cell Signaling, 1:1000), p-NF-κB (Abcam, 1:500), p65 NF-κB (Abcam, 1:1000), lamin A/C (Abcam, 1:500), p-IKKα (Abcam, 1:500), IKKα (Abcam, 1:1000) at 4°C overnight, and followed by incubation with HRP-conjugated secondary antibodies. Immunoreactive bands were visualized with ECL chemiluminescence and quantified by using Image-Pro Plus software.
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