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4 protocols using nogo a

1

Western Blot Analysis of Brain Protein Markers

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Brains were homogenized and processed for western blotting as previously described [27 (link)]. Thirty μg of proteins were loaded in each lane and separated followed by transfer to nitrocellulose membranes. The membranes were blocked using 5% non-fat milk in TBST (1% tween 20 in tris buffered saline) and probed with the following antibodies antiBDNF (1:250; abcam; Cambridge, MA), TrkB (1:500, abcam; Cambridge, MA), p75NTR (1:1000, Millipore; Billerica, MA), Nogo-A (1:1000, Millipore; Billerica, MA), CHOP (1:1000) and nNOS (1:1000, Cell Signaling; Danvers, MA), ATF6 (1:500), pJNK (1:1000) and JNK (1:1000, Santa Cruz biotechnologies; Santa Cruz, CA). Expression was assessed by quantification of optical density of respective bands normalized to actin using NIH-image J software.
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2

Protein Expression Profiling in Cellular Samples

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The primary antibodies used were as follows: APC (1:100 mouse monoclonal OP80, Calbiochem), Lef1 (1:200 Rabbit mAb C12A5, Cell Signaling), anti-human Lef1 (1:100 rabbit polyclonal Ab22884, Abcam), RNF43 (1:200 rabbit polyclonal Ab84125, Abcam), ETS2 (1:200 chicken polyclonal Ab17901, Abcam), DUSP4 (1:200 rabbit polyclonal Ab60229, Abcam), SP5 (1:200 rabbit polyclonal Ab36593, Abcam), Tcf4 (1:100 mouse monoclonal 6H5-3, Upstate), Olig2 (1:3000 rabbit polyclonal from CD Stiles, Harvard), Nkx2.2 (1:100 mouse monoclonal, Developmental Studies Hybridoma Bank), PDGFRα (1:200 rat 558774, BD Biosciences), NOGO-A (1:200 rabbit, Millipore), and GFAP (1:500 mouse, Sigma).
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3

Western Blot Analysis of Neuronal Proteins

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Samples were processed using 10% acrylamide gels and transferred to PVDF membranes. Membranes were blocked with 1% blocking buffer (Perfect-block; MoBiTec) in TBS-TritonX (0.1%) for 1 h and incubated overnight with a primary antibody against Nogo-A 1 : 1000 (Millipore), MAG 1:1000 (Cell Signaling Technology), OMgp 1:4000 (Millipore), Troy 1:500 (R&D Systems), NgR 1:1000 (R&D Systems), phospho-S3cofilin 1:1000 (Abcam: ab12866), cofilin 1:1000 (Abcam: ab42824), GluA1 1:1000 (Millipore; clone C3T), NEDD4 1:4000 (Abcam; ab14592), phospho-S845GluA1 1:1000 (Millipore), phospho-S831GluA1 1:1000 (Millipore), β-actin 1:2000 (Sigma), GAPDH 1:2000 (Cell Signaling Technology), or Ubiquitin 1:200 (Santa Cruz: sc8017) at 4°C. Blots were then washed in TBS-TritonX and placed in HRP-conjugated anti-rabbit or anti-mouse secondary antibody at a 1:1000 dilution. Blots were then washed and reacted with electrochemiluminescence (ECL) or ECL-prime reagents. ECL-treated blots were quantified by densitometry using LAS4000 (Fujifilm). Protein phosphorylation data are expressed as percentages of the control.
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4

Protein Expression Profiling in Cellular Samples

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The primary antibodies used were as follows: APC (1:100 mouse monoclonal OP80, Calbiochem), Lef1 (1:200 Rabbit mAb C12A5, Cell Signaling), anti-human Lef1 (1:100 rabbit polyclonal Ab22884, Abcam), RNF43 (1:200 rabbit polyclonal Ab84125, Abcam), ETS2 (1:200 chicken polyclonal Ab17901, Abcam), DUSP4 (1:200 rabbit polyclonal Ab60229, Abcam), SP5 (1:200 rabbit polyclonal Ab36593, Abcam), Tcf4 (1:100 mouse monoclonal 6H5-3, Upstate), Olig2 (1:3000 rabbit polyclonal from CD Stiles, Harvard), Nkx2.2 (1:100 mouse monoclonal, Developmental Studies Hybridoma Bank), PDGFRα (1:200 rat 558774, BD Biosciences), NOGO-A (1:200 rabbit, Millipore), and GFAP (1:500 mouse, Sigma).
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