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29 protocols using cd4 bv421

1

Tumor-Infiltrating Immune Cell Analysis

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M-chlorin e6 PDT was performed as described above. Mice were euthanized by cervical dislocation on day 2 after LED irradiation. The tumors were removed and treated with 10% collagenase (Wako), shredded using a gentleMACS™ Dissociator (Miltenyi Biotec, Bergisch Gladbach, Germany), and passed through a 70-μm filter. Next, 1.0 × 106 cells were mixed with 1 μL of Fc-block/100 μL of stain buffer (BD Biosciences, San Jose, CA) and left on ice for 10 min. Subsequently, 1 μL of fluorescent antibody (CD11b-APC [BD Biosciences], CD206-BV421 [Biolegend, San Diego, CA], CD80-PE [BD Biosciences], CD86-PE-Cy7 [BD Biosciences], CD45-PE-Vio®770 [Miltenyi Biotec], CD3-FITC [Miltenyi Biotec], CD8a-APC-H7 [BD PharMingen, San Diego, CA], CD127-APC [BD PharMingen], CD25-PE [BD Biosciences], or CD4-BV421 [Biolegend]) diluted with 100 μL of stain buffer was added and left on ice for 30 min. The cells were then washed with 500 μL of phosphate-buffered saline (PBS) and suspended in 500 μL of stain buffer. Next, 5 μL of 7-AAD (BD Biosciences) was added to prepare a sampling solution, which was analyzed on a BD FACSVerse™ (BD Biosciences).
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2

Adoptive Transfer of Jurkat Tregs

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For adoptive transfer, the pMSCV-mouse Foxp3-EF1α-GFP-T2A-puro stable Jurkat cell line (System Biosciences, Palo Alto, CA, USA: cat# TCL110C-1), referred to as Jurkat Tregs, was harvested from culture, pelleted via centrifugation, and resuspended in HBSS (Thermo Fisher: cat# 24020117) at 2 × 106 cells/400 µl. 400 µl of Jurkat Treg suspension or HBSS vehicle control was loaded into a syringe and administered to mouse via intraperitoneal injection. Spleen, thymus, and small intestine samples were harvested 48 h post adoptive transfer and processed as described in the previous section. Cells were stained with CD4-BV421 (BioLegend: Cat# 100438, RRID : AB_11203718) and VISTA/PD-1H-APC (BioLegend: Cat# 143709, RRID : AB_11219607). A FMO control was used to determine VISTA-positive expression gates during analysis using FlowJo software.
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3

MDSC-Mediated T Cell Proliferation Assay

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Freshly isolated mouse BM cells were treated with GM-CSF and sB7H3 as described above. The control cell was treated with GM-CSF only. Three days later, the CD11b+Gr1+ MDSCs were isolated/purified using the EasySep™ Mouse Myeloid-Derived Suppressor Cell Isolation kit (Stemcell Technologies) according to the manufacturer’s instructions. Splenocytes isolated from mouse spleen were pre-labeled with 5 µM of proliferation dye carboxyfluorescein succinimidyl ester (CFSE) (BD Biosciences) and then co-cultured with GM-CSF/sB7H3-activated MDSC (1:1 ratio) in the presence of CD3/28 Dynabeads (Life Technology, Thermo Fisher Scientific) and 50 U/ml of rmIL2 (R&D Systems) for 3 days. The cells were collected and stained with CD4-BV421 (BioLegend, Cat# 100437, clone GK1.5) and CD8-APC (BioLegend, Cat# 100711, clone 53-6.7). The intensity of incorporated CFSE in CD4+ and CD8+ populations was analyzed by flow cytometry as described above.
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4

Immunophenotyping of Tumor Cells and CAR T Cells

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The following Abs were purchased from BD bioscience: human CD3-APC-H7 (Cat#: 560176, dilution: 1:100), CD4-BV421 (Cat#: 562424, dilution: 1:100), CD8-APC (Cat#: 340584, dilution: 1:100), CD45-BV510 (Cat#: 563204, dilution: 1:30), CD45RA-PE (Cat#: 555489, dilution: 1:30), CCR7-FITC (Cat#: 561271, dilution: 1:50) and B7-H3-BV421 (Cat#: 565829, dilution: 1:100); human CCR2-BV421 (Cat#: 357210, dilution: 1:100) Ab was purchased from Biolegend. Expression of human B7-H3 in tumor cell lines and organoid cells was assessed with the 376.96 mAb followed by APC-goat anti-mouse IgG Ab (BD Biosciences, Cat# 550826, RRID: AB_398465, dilution 1:100), and confirmed with another B7-H3 mAb (Clone 7–517; BD Bioscience, Cat#: 565829, RRID: AB_2739369, dilution 1:100)32 (link). Expression of the B7-H3.CARs was detected using the fusion protein 2Ig-B7-H3-Fc (R&D Cat# 1027-B3) and followed by AF647-goat anti-human IgG (H+L) Ab (Jackson ImmunoResearch Laboratories Inc., Cat# 109-606-088, dilution 1:100); CD19.CAR was detected with the previously described anti-CD19.CAR mAb47 (link). Samples were acquired with BD FACS Canto II or BD FACS Fortessa using the BD Diva software (BD Biosciences). For each sample, a minimum of 10,000 events were acquired and data were analyzed using Flowjo 10.
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5

Profiling T Cell Subsets and Tfh

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To determine the percentage of different T cell subsets, at least 1 × 106 PBMCs were suspended in isoflow sheath fluid (Beckman Coulter) and stained in a DuraClone IM T cell tube (Beckman Coulter, Miami, FL) according to the manufacturer's protocol. The T cell tube contained anti-CD45, CD3, CD8, CD4, CD45RA, and CCR7. Samples were measured by use of the Navios flow-cytometer (Beckman Coulter).
To determine the Tfh, at least 1 × 106 PBMC were washed by Fascflow (BD Biosciences, New Jersey, US) and stained with CD3 BV510 (Biolegend, California, US), CD4 BV421 (Biolegend, California, US), CXCR5 Alexa Fluor 647 (BD Biosciences, New Jersey, US), and PD1 APC-Cy7 (Biolegend, California, US) for 30 min at room temperature in the dark.
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6

Detecting IL-21 Production in PBMC Subsets

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Patient's PBMC were stimulated for 3 days at 37°C, 5% CO2 and 95% humidity with CSFE-labeled, irradiated (40 Gy) donor PBMCs, depleted for CD3+ T cells, in culture medium. At the end of day 2 monensin and brefeldin A (GolgiStop and GolgiPlug, BD Biosciences) were added for 16 h in a concentration of 1:1,500 and 1:1,000, respectively, to allow the measurement of intracellularly accumulated cytokines in PBMCs. Thereafter, intracellular IL-21 was measured, and surface marker staining was used to investigate which subsets produced these cytokines. Monoclonal antibodies used for surface marker staining and intracellular cytokine staining were CD3 BV510 (BioLegend), CD4 BV421 (BioLegend), CD8 PerCP (BD Biosciences), CXCR5 APC (BD Biosciences), PD-1 APC-Cy7 (BioLegend), and IL-21 PE (Biolegend).
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7

Multiparametric Analysis of Human T Cell Responses

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The following antibodies were used to stain primary human T cells: anti-CD3 BV605 (catalog no. 317322, BioLegend), CD4 BV421 (catalog no. 311507, BioLegend), CD8 phycoerythrin (PE) (BD Biosciences), tumor necrosis factor–α (TNF-α) mouse anti-human BUV395 (catalog no. 563996, BD Biosciences), IFN-γ mouse anti-human BUV737 (catalog no. 564620, BD Biosciences), interleukin-2 (IL-2) rat anti-human allophycocyamin (APC) (catalog no. 554567, BD Biosciences), and macrophage inflammatory protein-1β (MIP-1β) mouse anti-human PE (catalog no. 550078, BD Biosciences). HLA-A*02:01-peptide monomers were produced by protein refolding from HLA-A*02:01 and β2 microglobulin Escherichia coli inclusion bodies as previously described (58 (link)). Before tetramer straining, T cells were incubated with 500 nM dasatinib in the RPMI 1640 medium for 60 min at 37°C as previously described (59 (link)). Intracellular cytokine staining was performed as previously described (60 (link)). Flow cytometry was performed using a BD LSRFortessa cell analyzer and analyzed using FlowJo software v.10.
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8

Flow Cytometry Analysis of Murine Immune Cells

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For flow cytometry, single-cell suspensions of mouse cLNs and lungs were prepared according to published protocols.53 (link),62 (link) Red blood cells were removed by lysis buffer (00-4300-54, eBioscience). Single-cell suspensions were incubated with flow cytometry antibodies targeting surface markers. For intracellular cytokine staining, the suspensions were stimulated using Leukocyte Activation Cocktail with BD GolgiPlug (423303, Biolegend) for 5 h. Antibodies against CD45-BV510 (103137, Biolegend), CD3-FITC (553061, BD Pharmingen), CD4-BV421 (100543, Biolegend), CD8-PE-Cy7 (100721, Biolegend), IL-17A-PE (506903, Biolegend) and IFN-γ-APC (505809, Biolegend) were used at a 1:200 dilution ratio. Dead cells were excluded from analysis using the Zombie NIR™ Fixable Viability Kit (423106, Biolegend). Samples were analyzed using a BD LSRFortessa X-20 (BD Biosciences) or CytoFLEX (Beckman Coulter). Results were analyzed using FlowJo 10.5.3 software (BD Biosciences).
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9

Comprehensive Immune Cell Phenotyping

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The following antibodies were used in this study: CD3 AF700, CD4 BV421, CD4 FITC, CD6 APC, CD10 BV605, CD19 APC-Cy7, CD21 PE-Cy7, CD25 PerCP-Cy5.5, CD27 BV421, CD28 PerCP-Cy5.5, CD38 PerCp-Cy5.5, CD45RA APC-Cy7, TCR αβ PerCP-Cy5.5, IL-2 PE, LAT PE, NTAL/LAB APC, and biotin anti–human TCR-Vd2 (BioLegend); TCR-Vd1 APC (Miltenyi Biotec); CD8 APC, CD8 Pacific blue, CD21 PE-Cy7, CD31 PE, CD56 APC, CD69 FITC, CD107a PE, CD127 Alexa Fluor 647, IFN-γ FITC, TCR γδ PE, IgG Alexa Fluor 700, IκBα PE, ERK1/2(pT202/pY204) AF647, and ZAP70(pY319)/SYK(pY352) APC (BD); IgD FITC and IgA PE (SouthernBiotech); CD3 PE-Cy7, CD4 PE-Cy7, CD8 PE, CD16 FITC, CD45RA FITC, CD45 Pacific blue, Vα24 PE, and Vβ11 FITC (Beckman Coulter); CCR7 PE (R&D Systems); Bruton tyrosine kinase/ITK(pY551/pY511) PE, IL-17 PE, IL-4 APC, and ICOS PE (eBioscience); IgM Alexa Fluor 647 (Jackson ImmunoResearch Laboratories, Inc.); and PLCγ1(pY783) and goat anti–rabbit AF647 (Cell Signaling Technology). For immunohistochemistry, CD21 (Dako), CD20 (Invitrogen), CD3 (Cell Marque), CD4 and CD8 (Spring Bioscience), and Bcl-6 (Leica Biosystems) were used. For immunoblotting LAT (sc-7948; Santa Cruz Biotechnology, Inc.), FLAG tag (AHP1074; AbD Serotec), actin (sc-1616; Santa Cruz Biotechnology, Inc.), PLCγ1 (pY783; no. 2821; Cell Signaling Technology), and ZAP70 (pY319; no. 2701; Cell Signaling Technology) were used.
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10

Multiparametric Flow Cytometry Analysis

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Flow-cytometry antibodies included CD3e-PE, PD1-BV605, CD45-BV786 (BD-Biosciences), CD90.1-FITC, CD62L-PECy7, CD45.1-APC, CD45.1-PE (eBioscience), CD45.2-Alexa700, CD-8α-Percp-Cy5.5, CD4-FITC, CD103-APC, CD24-APCcy7 (Invitrogen), CD44-APCy7, CD4-BV421, F4/80-PercpCy5.5, CD39-PECy7, PDL1-PE, CD90.2-Alexa 700, MHCII-BV421, CD11b-BV650, Ly6C-BV711 (Biolegend), CD8α-PE-Texas-red (Life Technologies, Carlsbad, CA, USA). Blocking PD-1 antibody (clone RMP1-14, BioXCell, Branford, CT, USA) was administered systemically by intraperitoneal injections of 250 μg [41 (link)]. Blocking anti-CD40L (clone MR1, BioXCell) was administered systemically by intraperitoneal injections of 250 μg [19 (link)].
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