Recombinant human PTP1B (hPTP1B) containing 10 mM DTT was desalted by PD SpinTrap G-25 desalting column to remove DTT. Recombinant DTT-free hPTP1B (20 μM) was incubated with or without 50 μM Na2S2 for 10 min and then 100 μM H2O2 for 10 min at 25°C. Samples were treated with or without TrxR1 (250 nM), Trx1 (15 μM), TRP14 (15 μM), TRP32 (15 μM), and NADPH (1 mM) for 30 or 60 min at 37°C. Samples were alkylated with 1 mM iodoacetamide for 30 min, followed by digestion with Trypsin Gold at 37°C for 10 hours. The digested samples were subjected to LC-Q-TOF MS (Agilent Technologies), and the data were narrowed to the active-site peptide by Mascot search.
Lc qtof ms
The LC-QTOF-MS is a liquid chromatography-quadrupole time-of-flight mass spectrometry system designed for high-resolution, accurate-mass analysis. It combines liquid chromatography for sample separation and quadrupole time-of-flight mass spectrometry for precise mass measurement and structural identification of analytes.
Lab products found in correlation
16 protocols using lc qtof ms
Oxidative Regulation of Peroxiredoxin and PTP1B
Recombinant human PTP1B (hPTP1B) containing 10 mM DTT was desalted by PD SpinTrap G-25 desalting column to remove DTT. Recombinant DTT-free hPTP1B (20 μM) was incubated with or without 50 μM Na2S2 for 10 min and then 100 μM H2O2 for 10 min at 25°C. Samples were treated with or without TrxR1 (250 nM), Trx1 (15 μM), TRP14 (15 μM), TRP32 (15 μM), and NADPH (1 mM) for 30 or 60 min at 37°C. Samples were alkylated with 1 mM iodoacetamide for 30 min, followed by digestion with Trypsin Gold at 37°C for 10 hours. The digested samples were subjected to LC-Q-TOF MS (Agilent Technologies), and the data were narrowed to the active-site peptide by Mascot search.
Complementation Assay for tRNA Methyltransferase
Plasma and Urine Metabolite Extraction and Analysis
The plasma and urine metabolites were extracted using methanol:water (9:1, v/v) mixture containing 1 µg/mL myristic acid as internal standard. Then, the extracts were centrifuged at 15,000 rpm for 5 min (at +4 °C) and 200 µL aliquots of each sample supernatant were transferred to three Eppendorf tubes and completely dried by a vacuum centrifuge for GC-MS, LC-qTOF-MS, and LC-MS/MS-based metabolomics analysis.
The extracted samples were analyzed using a gas chromatography-mass spectrometry system (GC-MS-QP-2010 Ultra system, Shimadzu, Kyoto, Japan) and LC-qTOF-MS (Agilent, California, USA). The representative chromatograms of GC-MS and LC-qTOF-MS based metabolomics analysis for plasma and urine samples are given in
Bioactive Compound Characterization by LC-QTOF-MS
Metabolomic Analysis of FTR Samples
Characterization of Phytochemicals in Fr. 3
HPLC-Based AFB1 Degradation Assay
Enzymatic Glucosylation of Glycyrrhetinic Acid
Identification of Phenolic and Flavonoid Compounds in BsE Fraction by LC-QTOF MS
MS was operated with Dual AJS source, and the instrument parameters were as follows: gas temperature, 325 °C; gas flow, 13 L/min; nebulizer, 35 psi; sheath gas temperature, 275 °C; sheath gas flow, 12 L/min; VCap, 4000 V; nozzle, 2000 V; fragmentor, 175 V; skimmer, 65 V; and octopole RF peak, 750. The scan range of the ion trap was 100–1500 m/z for MS and 50–1500 m/z for MS/MS. The mass spectra were recorded in both negative and positive ion modes. The reference mass ions purine at 112.9856 (for negative mode) and 121.0508 (for positive mode), as well as the HP921 at 1033.9881 (for negative mode) and 922.0098 (for negative mode), were used for continuously correcting any mass drift. All data were analyzed by LC/MS Data Acquisition and Qualitative Analysis Workflows software.
Plasma Proteomic Profiling Workflow
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