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22 protocols using ecl detection kit

1

COX-2 Protein Expression Analysis in Huh-7 Cells

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Huh-7 cells were seeded in 24-well plates at a density of 5 × 104 cells per well overnight and treated with indicated reagent at proper concentrations for three days. Cells were washed with cold phosphate-buffered saline (PBS) and lysed by radioimmunoprecipitation assay (RIPA) lysis buffer (50 mM Tris-HCl, pH 7.5, 150 mM NaCl, 1% Nonidet P-40, 2 mM ethylenediaminetetraacetic acid (EDTA), 1 mM ethylene glycol bis(2-aminoethyl)tetraacetic acid (EGTA), 1 mM NaVO3, 10 mM NaF, 1 mM dithiothreitol (DTT), 1 mM phenylmethylsulfonyl fluoride (PMSF), 25 μg/mL aprotinin, and 25 μg/mL leupeptin) and stored at −20 °C. The protein concentration was determined by the Bradford method. Then, 10-μg protein samples were separated by 10% SDS-PAGE and transferred onto a polyvinylidene fluoride (PVDF) membrane. The membrane was blocked with 5% non-fat dried milk and incubated with specific antibodies against GAPDH (1:10000, Genetex, Irvine, CA, USA) and COX-2 (1:1000; Cayman Chemical, Ann Arbor, ML, USA). Antibodies were diluted in 5% milk containing Tris-buffered saline (TBS) and 0.5% Tween. The blotting signal was developed using an enhanced chemiluminescence (ECL) detection kit (PerkinElmer, Waltham, MA, USA) and was counted by the software Quantity One (Bio-Rad, Hercules, CA, USA).
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2

Western Blot Protein Detection

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Cultured cells were detached as described above according to culture conditions, cell numbers were counted. Cells were lysed with 2X Laemmli Sample Buffer (Bio-Rad) at 5000 cells/se. Cell lysates were separated by NuPAGE 4%−12% Bis-Tris Protein Gel (Invitrogen) in NuPAGE MOPS SDS Running Buffer (Invitrogen) or NuPAGE MES SDS Running Buffer (Invitrogen) according to different protein size. Proteins were electrophoretically transferred to a nitrocellulose membrane (Thermo) with NuPAGE Transfer Buffer (Invitrogen). Blots were blocked for 30 min at room temperature in TBS-T + 5% BSA or 5% fat-free milk according to antibody requirements and probed overnight at 4°C with primary antibodies. After washing three times in TBS-T, signals were detected by using secondary mouse or rabbit antibodies conjugated to horseradish peroxidase. Secondary antibodies were incubated for 1 hour at room temperature. After three times washes, an enhanced chemiluminescence (ECL) detection kit (PerkinElmer) was used to develop the films and Blue Autography films (Crystalgen) were used to record the signals.
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3

Western Blot Analysis of shRNA Constructs

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shRNA constructs were validated by western blotting. Nlgn- and shRNA-transfected HEK293T cells were solubilized in lysis buffer (10 mM Tris, pH 8.0, 200 mM NaCl, 1% Triton X-100, 1% SDS, and protease inhibitors) and loaded onto 8% SDS-PAGE gels. HEK293T cell line (Sigma) was authenticated by STR-PCR. Primary antibodies (1:1000 to 1:3000 dilution) were applied in blocking buffer (20 mM Tris, pH 7.4, 137 mM NaCl, 0.1% Tween 20, 1% bovine serum albumin, and 5% nonfat milk) for 2 hr at room temperature. Secondary antibodies were used at 1:2000 dilution. The signal was detected using an ECL detection kit (PerkinElmer Life Sciences).
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4

Protein Expression Analysis in Ava5 Cells

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Ava5 cells were seeded into a 24-well plate at a density of 5 × 104 cells/well and into a 6-well plate at a density of 5 × 105 cells/well. After 12–16 h of incubation, cells were treated with the reagents for appropriate duration at the indicated concentrations. Then, the cells were washed with ice-cold PBS and lysed using RIPA lysis buffer. The insoluble protein was removed by centrifugation at 12,000 rpm for 30 min at 4 °C, and the protein concentration of the soluble lysate was measured by Bio-Rad protein assay kit (Hercules, CA, USA). Immunoblotting analysis was performed as previously described. Briefly, an equal amount of protein was loaded onto 10% SDS-polyacrylamide gel electrophoresis and transferred to PVDF membranes. The levels of the protein of interest were measured using specific antibodies against HCV NS5B (1:5000; Abcam Cambridge, MA, USA), glyceraldehyde-3-phosphate dehydrogenase (GPADH), COX-2 (1:1000; Cayman, ML, USA), Myc (1:1000; GeneTex, CA, USA), C/EBP, p-c-Jun, p-p38, t-p38, p-JNK, t-JNK, p-ERK, and t-ERK (1:1000; Cell Signaling Technology, Danvers, MA, USA). The blotting signal was developed using ECL detection kit (PerkinElmer, CT, USA) and was counted by the software Quantity One (Bio-Rad, CA, USA).
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5

Western Blot Analysis of Proteins

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Proteins were separated by SDS-polyacrylamide gel electrophoresis (SDS-PAGE) on a 12% polyacrylamide gel under denaturing conditions according to the method of Laemmli and were transferred to Immobilon membranes (Millipore, Billerica, MA). The membranes were blocked in 5% nonfat powdered milk in 20 mM Tris-buffered saline, pH 7.6 (TBS) containing 0.1% Tween 20 (TTBS) for 1–2 hours at room temperature. Then, the membranes were incubated with primary antibodies (1,000-fold dilution in TBS buffer) and with secondary antibodies (2,000-fold dilution in TBS buffer). The visualization of the target protein was performed by enhanced chemiluminescence using an ECL detection kit (PerkinElmer, Waltham, MA), a method based upon a chemiluminescent reaction mediated by peroxidase conjugated to a secondary antibody. The signals were digitized using a CCD camera system (Luminescent Image Analyzer LAS-4000 mini; Fujifilm, Tokyo, Japan).
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6

SDS-PAGE and Immunoblotting of Protein Samples

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The SDS-PAGE was performed as described by Laemmli32 (link). The separation of protein samples was carried out with 12% SDS polyacrylamide gel. The SDS polyacrylamide gels were stained using Coomassie brilliant blue R250 solution for analysis as described earlier33 (link) for visual observation. For immunoblotting the protein samples from the SDS-PAGE were transferred onto a polyvinylidene fluoride (PVDF) membrane (Roti®-Fluoro PVDF, pore size 0.2 μM, Carl Roth, Germany) using Trans-Blot SD Semi Dry Transfer Cell (Bio-Rad, USA). Subsequently, the membrane was soaked in a blocking buffer, 5% nonfat dry milk in tris-buffered saline (W/V) with 0.5% tween 20 (V/V) (TBS-T) for 1 h at room temperature with a constant shaking (20 cycles/min). Afterwards, the membrane was probed with the respective primary antibody in a blocking buffer (30 cycles/min), followed by three washes with TBS-T buffer for 10 min and incubated with blocking buffer containing the respective secondary antibody. After three washes with TBS-T buffer, blots were visualized by a commercially available enhanced chemiluminescence (ECL) detection kit (PerkinElmer, USA) and the images were acquired by FUSION FX7™ Advance Chemiluminescence System (Peqlab, Germany).
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7

Chemokine and Cytokine Profiling in Lung and Tumor

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Chemokine array (R&D Systems, Wiesbaden, Germany) was performed according to the supplier’s protocol. Membranes were first incubated with samples (pooled lung protein extracts, n = 5) followed by a cocktail of biotin-labeled antibodies. Membranes were then incubated with streptavidin conjugated to horseradish peroxidase (HRP), and spots were detected with an ECL detection kit (Perkin Elmer).
IL-16 detection in lungs, serum samples, and BALF and detection of s100A8, KC, and GM-CSF in 4T1-conditioned medium were performed with respective Mouse DuoSet ELISA kits (R&D Systems) according to the manufacturer’s protocol.
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8

Western Blot Procedure for DENV Proteins

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The standard procedure of western blotting was performed as described previously [12 (link)]. The membranes were probed with monoclonal antibodies specific for DENV NS2B, (1:5000; GeneTex, GTX124246), glyceraldehyde-3-phosphate dehydrogenase (GAPDH) (1:10000; GeneTex, GTX100118), Nrf2 (1:3,000; GeneTex, GTX55732), HO-1 (1:3,000; Abcam, ab137749), Keap1 (1:1,000; Abcam, ab196346), and Bach1 (1:1,000; Abcam, ab115210). The ECL detection kit was used for signal detection (PerkinElmer, CT, USA).
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9

Western Blot Analysis of Signaling Proteins

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Western blotting was performed according to standard procedures. A β-actin signal was used as an internal control. Cell lysates were separated on a 10% SDS/PAGE gel and transferred onto polyvinylidene fluoride membranes. Antibodies against nuclear factor (NF)-κB, tumor necrosis factor (TNF) receptor associated factor 6 (TRAF6), interleukin-1 receptor-associated kinase (IRAK)1, extracellular regulated protein kinases (ERK)1, Jun N-terminal kinase (JNK)1/2, p38α/γ, β-catenin and β-actin (R&D Systems, Minneapolis, MN, USA) were used, and secondary HRP-conjugated anti-rabbit or anti-mouse IgG antibodies (R&D Systems, Minneapolis, MN, USA) were added. The signals were visualized by using an ECL detection kit (PerkinElmer, Boston, MA, USA).
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10

Quantification of Yap-1 Phosphorylation in Rat Cardiomyocytes

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Protein lysates of neonatal rat ventricular cardiomyocytes were prepared and subjected to SDS-electrophoresis, as previously described (Meus et al, 2017 (link)). Antibodies used include rabbit polyclonal anti-Yap-1 (1:500; Cell Signalling), rabbit polyclonal directed against phosphorylated serine127 of Yap-1 (1:500; Cell Signalling), and a mouse monoclonal anti-GAPDH (1:50,000; Ambion, Austin TX). Following overnight incubation at 4°C, the appropriate secondary antibody-conjugated to horseradish peroxidase (1:20,000, Jackson Immunoresearch, West Grove, PA) was added and bands visualized utilizing the ECL detection kit (Perkin Elmer, Waltham, MA). Films were scanned with Image J software® and the target protein signal was depicted as arbitrary light units.
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