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17 protocols using ephrin b2 fc

1

Ephrin-B2 Modulation in AVF

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Eph-B4 was stimulated with Ephrin-B2/Fc (R&D, Minneapolis, MN). 24 hours prior to AVF creation, mice underwent ultrasound for measurement of preoperative vessel diameter as described above. While still under isoflurane anesthesia, Ephrin-B2/Fc (20 µg) diluted in 200 µL PBS was delivered by intraperitoneal injection; control mice received an equal volume injection of vehicle (PBS). The next day, an infrarenal aorto-caval AVF was created as described above. Additional intraperitoneal injections of Ephrin-B2/Fc or control vehicle were delivered every 48 hours beginning on postoperative day 1 and continued throughout the study period.
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2

Osteogenic Differentiation of MSCs

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EphrinB2-FC (4 μg/mL, R&D Systems, Minneapolis, MN, USA) and POSTN (500 ng/mL, R&D Systems) were added individually to promote osteogenic differentiation. NVP-BHG-712 (BHG712, 50 ng/mL, R&D Systems) was used as a EphB4 kinase inhibitor. Integrin αvβ3 on MSCs was blocked by incubation with a mouse monoclonal antibody (2 μg/mL, Abcam) at 37°C for 2 h before exposure to EphrinB2-FC or POSTN as a control treatment.
The culture medium was replaced with special conditional osteogenic differentiation medium (OriCell MSC Osteogenic Differentiation Medium, Cyagen Biosciences), which was then refreshed every 3 days. Alkaline phosphatase (ALP) staining was performed with a FAST BCIP/NBT tablet (Sigma-Aldrich, St. Louis, MO, USA) after 9 days in culture, and calcium nodules were stained by 0.4% Alizarin red S staining (Sigma-Aldrich) after 21 days in culture.
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3

Ephrin-B2/Fc Stimulation of Eph-B4 in AVF

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Eph-B4 was stimulated with Ephrin-B2/Fc (R&D, Minneapolis, MN). 24 hr prior to AVF creation, mice underwent ultrasound for measurement of preoperative vessel diameter as described above. While still under general isoflurane anesthesia, 20 µg of Ephrin-B2/Fc diluted in 200 µL PBS was delivered by intraperitoneal injection (IP). Control mice received an equal volume injection of vehicle (PBS) as control. The next day, an infrarenal aorto-caval AVF was created as described above. Additional IP injections of Ephrin-B2/Fc were delivered every 48 hr beginning on postoperative day 1 and continued throughout the study period.
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4

Ephrin-B2 Modulation of Cell Migration

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CAL27 cells or LY2 were serum starved overnight prior to seeding (2.5× 105 cells/well) in serum-free media into the upper chamber of a 24 well plate insert with 8.0 μM pores (BioCoat Control Inserts, BD). Bottom chamber was filled with appropriate media containing 10% FBS and pre-clustered control-Fc or ephrinB2-Fc (R&D Systems). Cells were incubated in a 37oC cell culture incubator and allowed to migrate for 48 h (CAL27) or 24 h (LY2). To prepare membranes for imaging, un-migrated cells in the upper chamber were removed according to manufacturer’s instructions and migrated cells were stained in 0.1% crystal violet (10% methanol), washed in dH2O, and allowed to dry overnight before membrane was cut and mounted on a microscope slide with immersion oil. An image of the membrane was taken at 4x magnification and number of migrated cells was counted using ImageJ software (NIH). Experiment was repeated 2–3 times. Each condition had three replicates.
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5

Endothelial Cell Proliferation Assay

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100,000 HDMEC were seeded in p60 dishes overnight and then stimulated with different combinations of the following reagents: 50 ng/ml hVEGF165 (R&D Systems), 50 ng/ml or 2 μg/ml ephrinB2‐Fc (R&D Systems), and 25 ng/ml FGF‐2 (BD Biosciences). After 24 h, cells were collected, fixed, and permeabilized with the FOXP3 Fix/Perm kit (Biolegend) according to the manufacturer's instructions, stained with rabbit polyclonal anti‐Ki67 (Abcam), detected with an Alexa546‐anti‐rabbit secondary (Invitrogen), and with Alexa647‐anti‐pHH3 (clone HTA28, Biolegend). Finally, cells were incubated with Hoechst 33342 (Life Technologies, Zug, Switzerland) for 2 h in the dark at 4°C and analyzed with a Fortessa FACS analyzer (Becton Dickinson).
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6

Inducible EPHB2-FLAG expression in HeLa cells

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HeLa and HEK293T cells were maintained in DMEM (Thermo Fisher Scientific, #11965092) supplemented with 10% Fetal Bovine Serum (FBS; Wisent Bioproducts, #080–150) and 1% Penicillin/Streptomycin (Wisent Bioproducts, #450–200-EL) at 37 °C with 5% CO2. Tetracycline inducible HeLa EPHB2-FLAG cells were generated by transfecting Flp-In T-REx HeLa cells with EPHB2-BirA*-FLAG expression plasmid using Lipofectamine 3000 (Invitrogen, #L3000015) followed by hygromycin selection (200 µg/ml). Stable but not clonal CTRLCTRISPR or MYCBP2CRISPR HeLa EPHB2-FLAG cell lines were generated by infecting cells with packaged lentivirus, followed by puromycin selection (1 µg/ml). Lentivirus particles were packaged using MYCBP2 sgRNA CRISPR plasmid designed to target the MYCBP2 exon6 (pLentiCRISPR2-sgMYCBP2) and pLentiCRISPR empty vector was used as Ctrl CRISPR. EPHB2-FLAG overexpression was induced using 1 µg/ml tetracycline simultaneously with cell starvation in DMEM supplemented with 0.5%FBS, 1% Penicillin/Streptomycin for 12–20 hr. Prior to cell stimulation, Fc control (Millipore, #401104), ephrinB1-Fc (R&D, #473-EB) or ephrinB2-Fc (R&D, #496-EB) were pre-clustered using goat anti-human Fc IgG (Sigma, #I2136) in 4:1 ratio for 30 min.
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7

Tetracycline-Inducible EPHB2-FLAG Overexpression

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HeLa and HEK293T cells were maintained in DMEM (Thermo Fisher Scientific, #11965092) supplemented with 10% Fetal Bovine Serum (FBS; Wisent Bioproducts, #080–150) and 1% Penicillin/Streptomycin (Wisent Bioproducts, #450–200-EL) at 37°C with 5% CO2. Tetracycline inducible HeLa EPHB2-FLAG cells were generated by transfecting Flp-In T-REx HeLa cells with EPHB2-BirA*-FLAG expression plasmid using Lipofectamine 3000 (Invitrogen, #L3000015) followed by hygromycin selection (200μg/ml). Stable but not clonal CTRLCTRISPR or MYCBP2CRISPR HeLa EPHB2-FLAG cell lines were generated by infecting cells with packaged lentivirus, followed by puromycin selection (1μg/ml). Lentivirus particles were packaged using MYCBP2 sgRNA CRISPR plasmid designed to target the MYCBP2 exon6 (pLentiCRISPR2-sgMYCBP2) and pLentiCRISPR empty vector was used as Ctrl CRISPR. EPHB2-FLAG overexpression was induced using 1μg/ml tetracycline simultaneously with cell starvation in DMEM supplemented with 0.5%FBS, 1% Penicillin/Streptomycin for 12–20h. Prior to cell stimulation, Fc control (Millipore, #401104), ephrinB1-Fc (R&D, #473-EB) or ephrinB2-Fc (R&D, #496-EB) were pre-clustered using goat anti-human Fc IgG (Sigma, #I2136) in 4:1 ratio for 30min.
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8

Codon-Optimized CedV Glycoprotein Expression

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Codon-optimized sequences of CedV-G (GenBank accession number AJP33320.1) and CedV-F (GenBank accession number YP_009094085.1) were tagged with a C-terminal HA or AU1, respectively, and cloned into pCAGGS mammalian expression vectors, as previously described for extant HNV glycoproteins (26 (link), 47 (link)). Soluble human ephrin-B1–Fc, ephrin-B2–Fc, ephrin-B3–Fc, and Eph-B3–Fc used for competition experiments were purchased from R&D Systems.
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9

Ephrin-B2-Fc and NVP-BHG 712 Treatment

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Ephrin-B2-Fc treatment cohort (efnb2iΔEC and efnb2lox/lox) received 4 i.v. injections of 100 μL Ephrin-B2-Fc (R&D Systems, Minneapolis, MI, USA, 1 mg/kg bw) on days 12, 15, 18 and 21. NVP-BHG 712 treatment group (efnb2iΔEC and efnb2lox/lox) received 100 μL of NVP-BHG 712 (Sigma Aldrich, St. Louis, MO, USA, 50 mg/kg bw) i.p. for 8 consecutive days, starting on day 13. Placebo group received either one injection containing 4.35 μL of IgG-Fc (i.v.) every three days, or 100 μL PEG 300 (i.p.) for 8 consecutive days.
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10

Ephrin-B2-Fc and NVP-BHG 712 Treatment

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Ephrin-B2-Fc treatment cohort (efnb2iΔEC and efnb2lox/lox) received 4 i.v. injections of 100 μL Ephrin-B2-Fc (R&D Systems, Minneapolis, MI, USA, 1 mg/kg bw) on days −5, −2, 1 and 4. NVP-BHG 712 treatment cohort (efnb2iΔEC and efnb2lox/lox) received 100 μL of NVP-BHG 712 (Sigma Aldrich, St. Louis, MO, USA, 50 mg/kg bw) i.p. for 8 consecutive days, starting on day 5.
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