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5 protocols using evos digital microscope

1

Plaque Size Measurement in CEF Monolayers

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Plaque size measurements were performed on the immunologically stained wild-type HVT- and HVT-ΔvNr-13-infected CEF monolayers as described above. The average plaque area was measured as described previously (80 (link)). Digital images of over 60 individual plaques were captured using the EVOS digital microscope (Thermo Fisher Scientific, USA). The average plaque areas were measured using ImageJ 1.51j8 software by manually drawing the outline of each plaque. Plaque size measurements were performed in three biologically independent experiments.
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2

Quantification of MDV Reactivation in CEF

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The MDV reactivation was quantified by co-culturing pp38/pp24 activated 4523T with CEF as described previously with minor modification [26 (link)]. Briefly, 6 × 105 of CEF cells per well were seeded into a 24-well plate on the day before co-culturing. Then, 10,000 gRNA transfected C4 cells with and without doxycycline treatment were co-cultivated with CEF for 24 h. After removing the C4 cells, the CEF cells were incubated for a further 5 days or until plaques had formed. The CEF monolayers were fixed with acetone/methanol for 5 min. The plaques were labelled with anti-gB mAb HB-3 [27 (link)] followed by the secondary antibody Rabbit Anti-Mouse Immunoglobulins/HRP (Agilent, Santa Clara, CA, USA). The plaques were developed using 0.1 M sodium acetate buffer pH 4.8, 3-amino-9-ethylcarbazole substrate solution (AEC, 4 mg/mL) and 30% hydrogen peroxide (Sigma-Aldrich, Burlington, MA, USA). The stained plaques were captured using an EVOS digital microscope (Thermo Fisher Scientific, Waltham, MA, USA) at 20× magnification.
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3

Detailed Neonatal Foreskin Fibroblast Culture

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Human male neonatal foreskin primary fibroblasts (HF043, Dundee CELL products) were seeded at 8 × 103 cells/cm2 in sterile filter-cap flasks (Greiner CELLSTAR) or ~ 1000 cells per well in 384 well plates and cultured in DMEM without phenol red (Gibco 31053-028/31053-044) supplemented with 10% FBS (Biosera, FB-1001/500) and 4 mM l-Glutamine (Sigma Aldrich). All cell incubation (including SASP and viability assays, below) was conducted at 37°C in a humidified incubator at 5% CO2. No antibiotics were used; mycoplasma negative status was confirmed by regular testing by PCR (Biological Industries EZ PCR Mycoplasma test kit, Geneflow K1-0210). Cells were monitored using an EVOS digital microscope (Life Technologies) and harvested at ∼ 80% confluency using TrypLE Express (Invitrogen, 12604021). After harvesting, cells were resuspended in DMEM with FBS and 20 µL of a homogenous suspension was counted using a Cellometer T4 (Nexelcom); both cell number and cell diameter in suspension were recorded. Population doublings (PD) were calculated using the formula:
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4

Primary Human Fibroblast Culture

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HF043 diploid neonatal primary human fibroblasts were obtained from Dundee CELL products, while HeLa cells were a gift from Prof. F. Barr (University of Oxford). Cells were routinely subcultured in DMEM (Sigma) with 10% FCS (Gibco) and incubated in a humidified incubator at 37 °C with 5% CO2. Cells were imaged using an EVOS digital microscope (Life Technologies) and routinely sub-cultured according to standard protocols (Walters et al. 2016 (link)). For diameter analysis and calculation of proliferation rates by cell counting, 20 µl of cell suspension was taken during cell harvesting for analysis using a Cellometer T4 (Nexelcom). The primary cells used in all experiments were at low CPD (cumulative population doubling, < 50 CPD c.f. HF043 fibroblasts reach replicative senescence around CPD 90 (Walters et al. 2016 (link))).
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5

HF043 fibroblast cell culture protocol

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Human neonatal foreskin fibroblast line HF043 (Dundee CELL products) was cultured in DMEM (Sigma) supplemented with 10% fetal calf serum (Gibco) in the absence of any added antibiotics, at 37°C in a humidified incubator with 5% CO2. Cells were monitored microscopically using an EVOS digital microscope (Life Technologies) and harvested when ∼80% confluent using TrypleExpress (Invitrogen). Following resuspension in DMEM with FCS, 20 μl of the cell suspension was counted and cell diameters measured using a Cellometer T4 (Nexelcom). Cells were seeded at 2×105 per T25 flask (Greiner), or at 1×104 in 24 well plates (Greiner). Population doublings (PD) were calculated as:
PD=log10(total cells harvested / total cells seeded)log102
Cumulative population doublings (CPD) were calculated as the sum of PD values.
AZD8055 (Selleckchem) was reconstituted to 1mM in DMSO and stored in aliquots at −20°C protected from light. Prior to drug treatment, medium was removed, cells washed with PBS, then fresh medium supplemented with drug was added. Total volume of drug or DMSO added to the culture medium never exceeded 1:10,000 v/v. Doses of 35 nM and 70 nM were chosen as effective but non-toxic based on our preliminary studies (not shown).
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