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6 protocols using picrosirius red

1

Quantification of Myocardial Fibrosis

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The apex of the harvested hearts was embedded in gum tragacanth (Sigma-Aldrich Chemie GmbH, Germany) and then stepwise frozen in isopentane and liquid nitrogen. Embedded tissue was stored at −80 °C until further usage. A cryotome (Leica CM 3050 S, Leica Microsystems GmbH, Wetzlar, Germany) was used for sections that were stained with haematoxylin and eosin, and Picrosirius Red as previously described [6 (link),8 (link),26 (link),59 (link)]. For Picrosirius Red stain, 6µm thick myocardial sections were fixed in ice-cold acetone for 10 min and afterwards washed twice with 98% ethanol for 5 min. Slides were then stained for 30 min in Picrosirius Red F3BA (Polysciences, Inc., Warrington, PA, USA). After rinsing with distilled water, slides were washed with 98% and absolute ethanol, dehydrated with xylol and mounted with Vitro-Clud (R. Langenbrinck GmbH, Emmendingen, Germany). Images were acquired using a Leica CTR 6500 HS microscope (Leica Microsystems GmbH, Wetzlar, Germany). Fibrosis was quantified using ImageJ software 1.42c (http://rsb.info.nih.gov/ij, last access 29 April 2022). In tile scan images, the borders of the myocardium were selected manually, and staining artefacts were removed. Using a predefined threshold, the red area representing fibrosis was measured and the results are presented as a percent of the total area.
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2

Histochemical Analysis of Hydrogel-Encapsulated Cells

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For the differentiation screening, hydrogels were first washed with two consecutive 10 min washes of fresh PBS. Following the PBS washes, the cell-laden constructs were placed in cassette sample holders and submerged in optimal cutting temperature (OCT) solution for 30 min. Subsequently, samples were snap frozen in liquid nitrogen, and 10-µm slices were sectioned on a cryostat machine and stained for safranin-O and picrosirius red to analyze the GAG production and collagen production, respectively. Briefly, for safranin-O staining, frozen sections were first let to air dry, rehydrated, and then immersed in 0.25% safranin-O solution for 7 min. Sections were then rinsed with water, fixed in methanol, dehydrated via graded ethanol, and mounted. For picrosirius red staining, air dried sections were rehydrated and placed in a picrosirius red solution (Sigma) for 1 h at room temperature. Next, stained sections were washed twice in fresh acidified water, fixed in methanol, dehydrated in graded ethanol, and finally, mounted. Brightfield images of safranin-O and polarized images of picrosirius red stained sections were taken using a DMR microscope (Leica Microsystems, Diegem, Belgium). For all sections, images were taken using a 10× objective.
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3

Histological Analysis of NAFLD

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Liver sections were fixed in Boin’s solution or in 10% buffered formalin. The fixed liver sections were paraffin embedded and cut into sections for histological analysis. The sections were stained with Lillie-Mayer’s Hematoxylin (Muto Pure Chemicals Co, Japan) and eosin solution (Wako Pure Chemical Industries, Japan). NAFLD activity score (NAS) was calculated according to the criteria of Kleiner et al. [27 (link)]. To study collagen accumulation, the sections were stained with Picrosirius Red (PSR, Waldeck, Germany) and examined in bright field images at a magnification of 200× using a digital camera (DFC295, Leica, Germany) and ImageJ software (National Institute of Health, USA). Hepatic steatosis was assessed using frozen liver sections (10 μm) stained with Oil Red O dye using the Oil Red O staining (Abcam, Cambridge, MA, USA). To assess the extent of steatosis, the percent of liver tissue area covered by oil-red positive lipid droplets was calculated as described previously [28 (link)]. The percentage area positive for lipid (red color) was calculated from the mean of 20 fields (200×) for each animal using Nikon NIS Elements Software (Nikon Instruments Inc., Melville, NY, USA). All histological analysis was carried out by at least two blinded observers.
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4

Histological Analysis of Repaired Skin

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The tissue sections were stained with hematoxylin and eosin, and images were collected using a Panoramic SCAN (3DHISTECH Ltd., Hungary) at the Kaohsiung Chang Gung Memorial Hospital. For different tattoos, variations in the average epidermal and dermal thickness were measured using CaseViewer software version 2.3 (3DHISTECH Ltd. Hungary).
For the histological study of repaired tissues at 2 and 6 months post-wound creation, a scalpel was used to excise a long rectangular piece of tissue from the center of each wound or normal skin. The samples were immersed and fixed in 10% formalin buffer for 24 h, dehydrated, and embedded in paraffin. Samples were sectioned at a 5-µm thickness and stained with hematoxylin and eosin (Merck, Germany) to observe the skin structure; picrosirius red stain (Polysciences Inc., USA) was used to identify the types and distribution of collagen fibrils, Masson’s trichrome stain HT-15 (Sigma-Aldrich Co., Switzerland) was used to determine the architecture and biosynthesis of collagen, and Verhoeff’s stain (Polysciences Inc., USA) was used to clarify the distribution and maturation of elastin fibrils. The stained tissue sections were analyzed under a light microscope (Leica, Germany) or with a polarizer when picrosirius red images were observed.
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5

Muscle Histology and Collagen Analysis

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To examine putative inflammatory cell infiltration of muscle fibres, tissue sections were stained with haematoxylin and eosin (H&E) using an autostainer (Leica ST5010 Autostainer XL, Leica Microsystems, Nussloch, Germany). For collagen staining, picro-sirius red (Leica Biosystems, Wetzlar, Germany) staining was completed. Slides were mounted using DPX mounting medium (Sigma-Aldrich, Wicklow, Ireland), air-dried and visualized on a bright field microscope (Olympus BX51) at ×10 magnification.
Data analysis: A total of six tissue sections per animal were examined. Muscle histology was scored using ImageJ software. Putative inflammatory cell infiltration (the presence of cells in the extracellular matrix) was scored and expressed as a percentage of the total area of muscle. For slides stained with picro-sirius red, the microscope lighting exposure was standardized during imaging. Images were analysed using a colour balance threshold and the area of collagen was expressed as a percentage of the total area of muscle. Data generated from multiple images was averaged per animal before computing group means.
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6

Quantifying Cardiac Collagen Content

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Fixed cardiac cross sections derived from the LV base, mid and apex region were embedded in paraffin and stained with Picrosirius Red (Morphisto, Germany). Collagen content was defined as the relative proportion of Picrosirius Red-positive area from total LV myocardium as assessed by a software algorithm (Aperio ImageScope and Aperio GENIE, both Leica Biosystems, Germany).
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