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52 protocols using scepter cell counter

1

Cell Viability Assay for Cancer Cell Lines

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PC-3, Endo, TC2-Ras, SH-SY5Y, and LNCaP cells were seeded in 96-well plates at 1,500 cells per well using the Scepter cell counter (EMD Millipore). Cells were continuously incubated with compound using a 6-point dose curve: 100, 57.5, 32.4, 18.6, 10.5, and 6.0 µM in their respective complete media. Cell viability was measured by using the cell counting kit-8 (CCK-8, Dojindo). CCK-8 uses a highly water soluble tetrazolium salt, WST-8, which is reduced by dehydrogenase in cells to yield a yellow formazan dye, which is directly proportional to the number of living cells. CCK-8 absorbance was measured at 450 nm using a GloMax Multimode Reader (Promega). Readings were performed the day after seeding to normalize for variations in cell seeding and after 96 hours of compound treatment. After each reading, CCK-8 media was removed and replaced with media containing compound as described previously. A serial dilution using vehicle, dimethyl sulfoxide (DMSO), for each cell line was performed in parallel along with inclusion of a media only negative control and a cell only positive control.
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2

Cell Size Measurement by Scepter

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Cell size was measured by Scepter cell counter equipped with a 40-μm sensor and software version 2.1, 2011 (Merck Millipore, Germany)40 (link). Resting or stimulated with mitogens PBL were centrifuged at 2000g and re-suspended in Hank’s balanced salt solution. Cells were diluted to concentrations of (0.5–1) × 106 cells/mL, which lie within the operating range of the instrument.
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3

Cryopreserved PBMC Thawing and Assay

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Cryopreserved PBMCs isolated as previously described 24 were thawed at 37⁰C and slowly transferred to pre‐warmed R10 media: RPMI 1640 (Sigma, St. Louis, MO, USA) supplemented with 10% heat‐inactivated FCS (Life Technologies, Carlsbad, CA, USA), 1mM Pen/Strep and 2 mM l‐glutamine (both from Sigma). Cells were washed once in R10 and treated with 25 Units Benzonase (Merck Millipore, Billerica, MA, USA) for 30 min at 37⁰C, 5% CO2, 95% humidity. After centrifugation, cells were resuspended in R10 and counted using the Scepter cell counter (Merck Millipore) for phenotyping assays or a hemocytometer with trypan blue staining (Sigma) to assess viability for functional assays. For ex vivo phenotyping, cells were immediately subjected to flow cytometry staining. Samples with a viability of less than 20% were excluded from analysis. For intracellular cytokine assays, cells were rested at 3 × 106 cells/mL in R10 at 37⁰C, 5% CO2, 95% humidity overnight, followed by counting and culture as described below.
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4

Evaluating FWGE's Impact on Ovarian Cancer

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The human ovarian carcinoma cells, ES-2 and SKOV-3, were seeded onto 96-well microplates with 5 × 103 cells per well and were incubated overnight. The following day, cells were treated with 0 to 1000 μg/mL of FWGE for 24 h or 48 h. The cell viability of the treated cells was determined using a Scepter cell counter (Merck Millipore Billerica, MA, USA) based on cell size measurements [25 (link)]. A morphological observation was performed using a Nikon Eclipse TS100 optical microscope (Nikon Instruments, Melville, NY, USA), and the observation was photographed at 100x magnification.
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5

BCAA and BCKA Effects on Cell Growth

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Cells were cultured in custom made RPMI 1640 medium w/wo the BCAA (Sigma-Aldrich #I7403, #L8912, and #V0513) and w/wo the BCKA (Toronto Research Chemicals, #M326420, #M326425 and #K193500), both individually and in combination, for 72 h and 120 h. After exposure, cells were washed with phosphate buffered saline, trypsinized with Trypsin-EDTA (0.05 %) (Thermo Fisher Scientific) and suspended in growth medium. Cell numbers were measured in the cellsuspension with TC20 automated cell counter (Bio-Rad Laboratories, Inc.) and/or Scepter cell counter (Merck Millipore).
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6

Culturing Human Endothelial Cells

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HRMECs were cultured in endothelial cell medium supplemented with endothelial cell growth supplement (ECGS), 5% fetal bovine serum (FBS), and 1% antibiotic–antimycotic. Cells were maintained at 37 °C in a humidified atmosphere with 5% CO2. The media were changed every other day until cells reached confluency. For seeding, cells were trypsinized and counted using a Scepter Cell Counter (Merck Millipore Co., Burlington, MA, USA).
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7

Graphene Oxide and H2O2 Induced Cell Damage

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On the 10th day of proliferation, cells were trypsinized. The next step was counting the cells using a Scepter Cell Counter (Merck Millipore, Darmstadt, Germany) and transferring 30,000 cells/well to Cellware 6-well plate covered by Collagen I (Greiner Bio-One, Monroe, NC, USA). When the cells obtained 80% confluence, the proliferation medium was replaced by differentiation medium (2% HS/ Dulbecco’s Modified Eagle Medium (DMEM)/AB). After the 2nd day of differentiation, 0.125 µM of GO (TCI Chemicals, Portland, USA), dissolved in 0.04 µL/mL DMSO as a vehicle, which was also used in the control medium, was added for 24 h. The MTT assay was used to choose the concentration of GO and H2O2 [25 (link)]. During the last part of the experiment (the last one hour of GO incubation), H2O2 (3 mM, Sigma Aldrich, Poznań, Poland) was added. The main purpose of H2O2 administration was to cause cell damage (Figure 1).
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8

Culturing Primary Human Astrocytes

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Cryopreserved primary human astrocytes were purchased from Innoprot (P10251, P10254). After thawing, cells were grown in cell culture flasks for 4 days and then plated on glass coverslips coated with poly-d-lysine (diameter 22 mm; Sigma-Aldrich, P6407) at a cell density of 1.5 × 104 cells per coverslip (transfection and immunocytochemistry experiments) or on 12-well culture plates (TPP, 92112) at a cell density of 3 × 104 cells per well (RT-PCR experiments) as measured by a Scepter cell counter (Merck KGaA, Darmstadt, Germany). Cell cultures were maintained in astrocyte growth medium (high glucose Dulbecco’s modified Eagle’s medium [Sigma-Aldrich, D5671] supplemented with 10% fetal bovine serum [FBS; Sigma-Aldrich, F7524], 1 mM sodium pyruvate [Sigma-Aldrich, S8636], 2 mM l-glutamine [Sigma-Aldrich, G3126], 5 U/ml penicillin, and 5 µg/ml streptomycin [Sigma-Aldrich, P0781]) at 37 °C, 5% CO2 atmosphere, and 95% relative humidity. Cells were used in experiments approximately 24 h after plating on coverslips/culture plates.
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9

Anti-cancer Effects of AE-SN in HCC Cells

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Hep3B and HepJ5 cells were plated onto 96-well plates, with 5 × 103 cells per well, and cultured overnight before treatment. To evaluate the antitumor effects of AE-SN, the cells were treated with 0 to 2.0 mg/mL of AE-SN for 48 h. To evaluate the antitumor effects of integrated treatment with the chemotherapeutic drugs and AE-SN, the cells were treated with 0 to 20 μM cisplatin or 0 to 10 μM and 0, 0.5, or 1.0 mg/mL of AE-SN for 48 h. In this study, cell viability was determined using a 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide (MTT) assay (Table 1).
Two approaches, namely, microscopic observation and measurement of the cell size distribution, were performed to inspect the morphological changes in AE-SN-treated HCC cells. General morphological changes were observed using a Nikon Eclipse TS100 optical microscope (Nikon Instruments, Melville, NY, USA) and photographed at 100x magnification, whereas the distribution of cell diameter was measured using a Scepter cell counter (Merck Millipore Billerica, MA, USA), which divided surviving cells from cell fragments and debris in a borderline of 12 μm [18 (link)].
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10

Splenocyte Migration Assay for Transformed MEFs

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Migration assays were conducted using the ChemoTx system (Neuro Probe, Inc., Gaithersburg, MD). Splenocytes isolated from mice inoculated with WT or Hsp70−/−E1A/Ras MEF transformants 5 days prior, were introduced into the upper chamber above WT or Hsp70−/− MEF transformants and after a 4 hour incubation at 37°C, the cell number in the lower well was enumerated using a Scepter cell counter (EMD Millipore, Billerica, MA).
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