The largest database of trusted experimental protocols

3 protocols using sc 136239

1

Western Blot Analysis of Cell Signaling

Check if the same lab product or an alternative is used in the 5 most similar protocols
Western blots were performed as described previously19 (link),20 (link),47 (link) using NuPage 4–12% gels and the following antibodies. Uncropped, original blots are provided in Supplementary Fig. 1.
The following primary antibodies were used: anti-TRPV4 antibody (raised in mouse; 1B2.6; Millipore Sigma; MABS466; 1:1,000), anti-ARP3 (mouse; FMS338; Abcam; ab49671; 1:5,000), anti-ARPC4 (rabbit; Abcam; ab217065; 1:2,000), anti-integrin β1 antibody (rabbit; Cell Signaling; 4706S; 1:1,000) and anti-NHE1 (raised in mouse; 54; Santa Cruz Biotechnology; sc-136239; 1:200). GAPDH was used as a loading control (rabbit; 14C10; Cell Signaling; 2118S; 1:5,000).
The following secondary antibodies were used: anti-mouse IgG, HRP-linked antibody (Cell Signaling; 7076S; 1:1,000) and anti-rabbit IgG, HRP-linked antibody (Cell Signaling, 7074S; 1:1,000).
+ Open protocol
+ Expand
2

Immunostaining of NHE1 in AP-1 cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
AP-1 cells (untransfected or stably expressing wt- or 4G-NHE1 as indicated) were grown on 12 mm round glass coverslips, fixed in 2% paraformaldehyde (15 min room temperature, 30 min on ice), washed in TBST, permeabilized for 5 min (0.5% Triton X-100 in TBS), blocked for 30 min (5% BSA in TBST), incubated with primary antibody against NHE1 (Santa Cruz Biotechnology sc-136239 (54); 1:100 dilution in TBST + 1% BSA) o/n at 4 °C. The day after, coverslips were washed 3 times in TBST + 1% BSA and incubated with the appropriate conjugated secondary antibody (1:600 in TBS + 1% BSA) in combination with rhodamine-conjugated phallodin (ThermoFisher, #R415) to label F-actin (1:100 in TBS + 1% BSA) for 1 h, followed by washing in TBST + 1 % BSA, and mounting in N-propyl-gallate mounting medium (2% (w/v) in PBS/glycerol). To stain nuclei, DAPI was added for 3 min following incubation with the secondary antibody. Cells were visualized using the 60X/1.35 NA objective of an Olympus Bx63 epifluorescence microscope. No or negligible labeling was seen in the absence of primary antibody or in untransfected AP-1 cells. Overlays and brightness/contrast adjustment was carried out using Adobe Photoshop software. No other image adjustment was performed.
+ Open protocol
+ Expand
3

Western Blot Analysis of Cellular Proteins

Check if the same lab product or an alternative is used in the 5 most similar protocols
siRNA-transfected cells were extracted and centrifuged. Cell pellets were lysed in Pierce radioimmunoprecipitation assay buffer (89900, Thermo Fisher Scientific) with Protease Inhibitor Cocktail Tablets (11836170001, Roche) and PhosSTOP Phosphatase Inhibitor Cocktail Tablets (04906845001, Roche). The protein concentration in each sample was measured using the Pierce BCA Protein Assay Kit (23227, Thermo Fisher Scientific). Laemmli Sample Buffer (1610747, Bio-Rad) was used to dilute samples to 3.5 μg/μl. Thirty-five micrograms of total protein was added in each lane of 4 to 15%, 15-well gradient gels (4561086, Bio-Rad). The gels were run for 35 min and the proteins were transferred to nitrocellulose (Bio- Rad) at 100 V for 45 min. The membrane was blocked in 5% milk for 1 hour, incubated overnight in primary antibodies against Vimentin (ab92547, Abcam; 1:1000), Nesprin3 (ab74261, Abcam; 1:500), Lamin A/C (2032S, Cell Signaling Technology; 1:1000), NHE-1 (SC-136239, Santa Cruz Biotechnology; 1:1000), TRPV4(ab39260, Abcam; 1:1000), P38 (SC-535, Santa Cruz Biotechnology; 1:1000), and glyceraldehyde-3-phosphate dehydrogenase (ab181602, Abcam; 1:1000). Blots were incubated with secondary antibodies against the primary for 1 hour and imaged using a LI-COR Odyssey imaging system (LI-COR Biotechnology).
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!