The largest database of trusted experimental protocols

4 protocols using sc 23921

1

Western Blot Analysis of DNA Damage Responses

Check if the same lab product or an alternative is used in the 5 most similar protocols
Appropriate amounts of proteins (30 μg or 60 μg), extracted from a pool of 3 P1-cerebella and MEFs were loaded and separated by SDS-PAGE. Proteins were electro transferred to PVDF or nitrocellulose membranes (Trans-Blot Turbo Transfer Pack, BIO-RAD Laboratories, Hercules, CA) at the Trans-Blot Turbo Transfer System (BIO-RAD Laboratories). After blocking, membranes were incubated over night at +4°C with primary antibodies against DNA-PKcs and p53 (ab70250 and ab31333, Abcam, Cambridge, UK), ATM, p21 (sc-23921 and sc-471, Santa Cruz Biotechnology, Santa Cruz, CA), anti-phospho-p53(Ser18) (9284, Cell Signaling Technology, Inc., Danvers, MA), β-actin and HSP70 (A5316 and H5147, Sigma-Aldrich, St Louis, MO). Membranes were probed for 1h at RT with appropriated HRP-conjugated secondary antibodies (Santa Cruz Biotechnology). Immunoreactive bands were visualized using Amersham ECL Prime WB detection reagent (GE Healthcare Europe, Milan, Italy). Images were acquired using a Image 6 quant LAS 500 (GE Healthcare Europe), and densitometric analysis was performed using ImageJ software.
+ Open protocol
+ Expand
2

Compound 1 Induces DNA Damage Response

Check if the same lab product or an alternative is used in the 5 most similar protocols
Exponentially growing SW620 cells were seeded in 6-well plates and
incubated for 4 days with compound 1 at the stated dose. Cells
were subsequently washed, trypsinized and lysed in Cell Panel Lysis Buffer
(5 mM Tris-HCl, 3 mM EDTA, 3 mM EGTA, 50 mM NaF, 2 mM sodium orthovanadate,
0.27 M sucrose, 10 mM β-glycerophosphate, 5 mM sodium pyrophosphate,
and 0.5% Triton X-100) supplemented with complete protease and phosSTOP
phosphotase inhibitors (both Roche). Proteins were separated by gel
electrophoresis and transferred to nitrocellulose membrane by Western blot.
Membranes were probed, at a concentration of 1:1000 unless stated otherwise,
for cleaved PARP (#9541, Cell Signaling Technology), γH2AX (#2577,
Cell Signaling Technology; 1:500), GAPDH (#3683, Cell Signaling Technology;
1:5000), FEN1 (ab109132, Abcam), phospho-ATM (Ser1981) (ab81292, Abcam),
PARP (51-6639GR, BD Biosciences), ATM (sc-23921, Santa Cruz Biotechnology)
and FANCD2 (sc-20022, Santa Cruz Biotechnology).
+ Open protocol
+ Expand
3

Protein Expression Analysis in Colorectal Cancer Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
SW620, DLD1, HCT-116 and HCT-116 chr3 cells were trypsinised, collected and lysed in Cell Panel Lysis Buffer with complete protease and phosphotase inhibitors. Proteins were separated by gel electrophoresis and transferred to nitrocellulose membrane by Western blot. Membranes were probed, at a concentration of 1:1000 unless stated otherwise, for ATM (sc-23921, Santa Cruz Biotechnology), MSH2 (556349, BD Pharmigen), MLH1 (WH0004292M2, Sigma Aldrich), MSH6 (610918, BD Transduction), MRE11A (ab214, Abcam), RAD50 (611010, BD Transduction), NBS1 (NB100-143, Novus Biologicals), FEN1 (ab109132, Abcam) and β-Actin (A5441, Sigma Aldrich).
+ Open protocol
+ Expand
4

Compound 1 Induces DNA Damage Response

Check if the same lab product or an alternative is used in the 5 most similar protocols
Exponentially growing SW620 cells were seeded in 6-well plates and
incubated for 4 days with compound 1 at the stated dose. Cells
were subsequently washed, trypsinized and lysed in Cell Panel Lysis Buffer
(5 mM Tris-HCl, 3 mM EDTA, 3 mM EGTA, 50 mM NaF, 2 mM sodium orthovanadate,
0.27 M sucrose, 10 mM β-glycerophosphate, 5 mM sodium pyrophosphate,
and 0.5% Triton X-100) supplemented with complete protease and phosSTOP
phosphotase inhibitors (both Roche). Proteins were separated by gel
electrophoresis and transferred to nitrocellulose membrane by Western blot.
Membranes were probed, at a concentration of 1:1000 unless stated otherwise,
for cleaved PARP (#9541, Cell Signaling Technology), γH2AX (#2577,
Cell Signaling Technology; 1:500), GAPDH (#3683, Cell Signaling Technology;
1:5000), FEN1 (ab109132, Abcam), phospho-ATM (Ser1981) (ab81292, Abcam),
PARP (51-6639GR, BD Biosciences), ATM (sc-23921, Santa Cruz Biotechnology)
and FANCD2 (sc-20022, Santa Cruz Biotechnology).
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!