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24 protocols using mak187

1

Antioxidant Activity Measurement Protocols

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The scavenging activity of 2,2-diphenyl-1-picrylhydrazine (DPPH) was analyzed using spectrophotometric methods [25 (link),26 (link)] with minor modifications. This study utilized the stable free radical DPPH (Sigma-Aldrich, St. Louis, MI, USA, Pcode: 101845869). In a 1.5-mL tube, 50 μL of each plasma and milk sample was mixed with 1 mL of DPPH reagent methanol solution (25 μmol/L). The mixture was thoroughly shaken and incubated in the dark at room temperature for 30 min, followed by centrifugation at 4000 r/min at 4 °C for 10 min. We then transferred the supernatant to a 96-well plate with 200 μL per well, and measured the absorbance at 517 nm using a microplate reader (Epoch, BioTek, Luzern, Switzerland). The DPPH-scavenging activity was calculated as a percentage using the following formula:
where Ac represents the control absorbance, and As represents the sample absorbance.
The enzyme activity of the total antioxidant capability (TAC), superoxide dismutase (SOD), glutathione S-transferase (GST), and malondialdehyde (MDA) was measured using Sigma-Aldrich kits, namely, MAK187 for TAC, 19160 for the SOD determination, CS0410 for GST, and MAK085 for MDA. Subsequently, the enzyme activity of all samples was determined using a microplate reader (Thermo Scientific™, Waltham, MA, USA).
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2

Enzymatic and Oxidative Stress Analysis

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For the third set of experiments, PBMCs were again centrifuged at 300× g for five minutes and were suspended in PBS supplemented by protease inhibitors to be sonicated twice for 10 s in ice, with a break of 30 s. The activity of H6PD and G6PD were assayed using an absorbance microplate reader (ELx808™, Winooski, VT, USA) to follow the reduction of NADP at 340 nm [24 (link),25 (link),26 (link),33 (link)]. H6PD enzymatic function was tested in the presence of Tris-HCl pH 7.4 100 mM, glucose 10 mM, and NADP 0.5 mM. By contrast, G6PD activity was assayed in the presence of Tris-HCl pH 7.4 100 mM, glucose-6-phosphate (G6P) 10 mM, and NADP 0.5 mM.
Malondialdehyde (MDA) levels were evaluated, by the thio-barbituric acid reactive substances assay, using a UV/visible spectrophotometer (Ultraspec 2000, Pharmacia Biotech, Erie, PA, USA) [26 (link),34 (link)]. In all cases, enzymatic activity was normalized for total protein concentrations tested using Bradford analysis [35 (link)].
Finally, total antioxidant capacity was evaluated following the manufacturer’s instructions of a dedicated kit (MAK187, Sigma, St. Louis, MO, USA) that provides a complete description of the total cell antioxidant power associated with the endogenous scavengers, expressed as Trolox equivalent antioxidant capacity content.
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3

Assessing REE Toxicity in Phytolacca

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A series of biomarkers were used to assess the potential toxic effects of REEs on Phytolacca species. First, leaf pigments (chlorophylls, flavonoids and anthocyanins) and the nitrogen balance index (NBI) were quantified using a DUALEX® SCIENTIFIC+ apparatus58 (link) (Force-A, Orsay, France) before harvesting. Forty technical replicates were carried out per plant. Second, root architecture was analysed. Root systems were photographed at harvest. The analyses of lateral root length and lateral root density (number of lateral roots per cm of primary root) were carried out using the RootNav software59 (link). Finally, the leaf and root contents of malondialdehyde (MDA) and total antioxidant compounds (TAC) were assayed from 50 mg of frozen powder using commercial kits (MAK085 and MAK187, Sigma-Aldrich, France) according to the manufacturer’s protocols. Two technical replicates were performed per sample.
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4

Cardiac Oxidative Stress Biomarkers

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Cardiac malondialdehyde (MDA) levels were estimated as a marker of lipid peroxidation using the method of Okhawa et al. (27 (link)), whereas antioxidant enzymes were measured by evaluating the levels of superoxide dismutase (SOD) using commercial kits (Dogen Bio, South Korea). Protein levels were estimated using the Bradford (Coomassie Plus) assay method, using bovine serum albumin as a standard (28 (link)). Additionally, to check the oxidative stress in the circulation, we determined the total antioxidant capacity (TAOC) level in serum in spectrophotometric analysis by using a commercial kit from Sigma (MAK187) according to the manufacturer’s instructions.
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5

Comprehensive Metabolic Profile Assessment

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Glucose, lipoproteins, and alanine aminotransferase (ALT) in plasma and glycated hemoglobin (HbA1C) in whole blood samples (collected in EDTA tubes) were quantified by Cobas c111 analyzer (Roche Diagnostics, Mannheim, Germany). A sensitive rat RIA kit (EMD Millipore, Billerica, MA, USA) was used to measure insulin. NEFA-HR2 assay (Wako Chemicals GmbH, Neuss, Germany) was utilized to determine non-esterified fatty acids (NEFAs) concentration. Plasma total antioxidant capacity was quantified by a commercial assay kit (MAK 187, Sigma Aldrich, Steinheim, Germany) according to the manufacturer’s instructions. Liver triglycerides content was estimated by cutting around 50 mg of frozen liver tissue per sample on dry ice and obtaining its saponified extract using a published protocol [25 (link)]. Triglyceride concentration was then quantified by a Cobas c111 analyzer.
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6

Serum Lipid and Antioxidant Biomarkers

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Serum total cholesterol, triglyceride, and low-density lipoprotein-cholesterol (LDL-C) concentrations were determined colorimetrically with a spectrophotometer using triglyceride (TR0100), total cholesterol (MAK043), and LDL/VLDL (MAK045) kits from Sigma Aldrich, following the manufacturer's instructions. Serum and meat filtrates were used for measuring the activity of the glutathione peroxidase (GSH-Px) using a commercial assay kit (Sigma-Aldrich, G6137). Total antioxidant capacity (T-AOC) was determined using a commercial assay kit (Sigma-Aldrich, MAK187), and the activity of superoxide dismutase (SOD) enzyme was determined using a commercial assay kit (Sigma-Aldrich, 19160) following the instructions of the test kit.
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7

Measuring Reducing Capacity with CUPRAC Assay

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To compare
the reducing
capacity measured with our method, a commercial reducing capacity
assay was performed (cupric reducing antioxidant capacity (CUPRAC)
assay, MAK187 from Sigma-Aldrich). To measure the reducing capacity
of the sample, a portion of sample was added into a 96 well-plate
and water was added to each well to bring the volume to 50 μL.
In each well, 50 μL of Cu(II) working solution provided in an
assay kit was added, mixed by pipetting and incubated for 30 min at
room temperature. After incubation, the absorbance was measured at
570 nm using a microplate reader (optical measurement). All data shown
in Figure 3 were averaged
from the triplicate measurements, and the error bar indicates standard
deviation.
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8

Antioxidant Capacity and Glutathione Quantification

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The total antioxidant capacity and reduced glutathione (GSH) activity of Renuspore® and L. rhamnosus GG were quantified by colorimetric analysis at 570 nm and 420 nm, respectively, using the total antioxidant capacity (TAC) (MAK187, Sigma-Aldrich, Ireland) (Ibrahim et al., 2021 (link)) and Reduced Glutathione Assay Kits (E-BC-K030-S, Elabscience , China). For these studies, both strains were grown in the TSB medium at 37°C until a final concentration of 1x108 CFU/mL was reached. The culture was then centrifuged at 6,000 RPM for 15 min, and the supernatant was discarded. The cell pellet was washed and resuspended in 1X PBS three times. The washed cell pellet was resuspended in 1.5 mL 1x PBS and homogenized three times at 3,500 RPM for 30 s using a microtube homogenizer (Beadbug, Benchmark, Ireland). The homogenized sample was centrifuged at 6,000 RPM for 15 min at 4°C. The cell debris was discarded, and the cell lysate was recovered for testing. 1X PBS was used as a negative control. The TAC and reduced glutathione assay were performed following the manufacturer's instructions.
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9

Antioxidant Status in Cortical Brain Tissue

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The homogenate of cortical brain tissue was used to measure total antioxidant capacity, lipid peroxidation, and protein carbonylation. The concentrations of total antioxidant capacity (Sigma-Aldrich, MAK187), malondialdehyde (MDA, Sigma-Aldrich, MAK085), and protein carbonyl content (Abcam, ab126287) were measured according to the manufacturer’s instructions. The concentration of total antioxidants was calculated as nmol per μL, MDA was calculated as nmol per mg protein, and the protein carbonyl content was calculated as nmol per mg protein. All measurements were performed by a person who was blinded to the grouping.
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10

Antioxidant Profiling in Muscle Tissue

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Serum superoxide dismutase (SOD, 19160), catalase (CAT, 219265) and glutathione peroxidase (GSH-Px, CS0260) activities were estimated using Sigma assay kits following the company’s guidance. Lipid peroxidation (MDA) was evaluated using the NO, MAK085 assay kit from Sigma-Aldrich. Muscle hydrogen peroxide (H2O2) amounts were determined as per Fernández-Puente et al. [27 (link)], and the obtained values were estimated as μmoL/g of tissue. To assess the (reactive oxygen species) ROS content in meat, the oxidation technique of Pranczk et al. [28 (link)] was utilized. The total antioxidant capacity (T-AOC) was established using a commercial kit (Sigma-Aldrich, MAK187, St. Louis, MO, USA).
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